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MS025038 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025038
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold247:187876..189133
RNA-Seq ExpressionMS025038
SyntenyMS025038
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154803.1 uncharacterized protein LOC111021969 [Momordica charantia]1.7e-0437.31Show/hide
Query:  FIWKLRHNIVPCNLGDDESPYYGQLYENEVEYEFQSDTEYDYDEYHTEDGVEDEDDQTEYENDEGNENDNGNKDELNDQPGNEGQLVNESYSVSRNTPFE
        F+  L  N+VPCNLGDDE  ++GQ       ++   D E D++     D +ED+DD  E E+++ NE D    + + D   +    V E  SVSRN P  
Subjt:  FIWKLRHNIVPCNLGDDESPYYGQLYENEVEYEFQSDTEYDYDEYHTEDGVEDEDDQTEYENDEGNENDNGNKDELNDQPGNEGQLVNESYSVSRNTPFE

Query:  TLEGLVSRPTQNLVTGDAADYVNEIAVGGIFRSK
        T+EG+ +   Q    G   D V++IA+G +FRSK
Subjt:  TLEGLVSRPTQNLVTGDAADYVNEIAVGGIFRSK

XP_022154930.1 uncharacterized protein LOC111022077 [Momordica charantia]8.4e-2052.63Show/hide
Query:  IVPCNLGDDESPYYGQLYENEVEYEFQSDTEYDYDEYHTEDGVEDEDDQTEYENDEGNENDNGNKDELN-------DQPGNEGQLVNESYSVSRNTPFET
        +VPCNL DD+ PYY +LYENEVEY+ +++ EYD  E     GVEDEDDQ E E +  + +DNGN DE+N       DQPGNEG+ V E  SVS N    T
Subjt:  IVPCNLGDDESPYYGQLYENEVEYEFQSDTEYDYDEYHTEDGVEDEDDQTEYENDEGNENDNGNKDELN-------DQPGNEGQLVNESYSVSRNTPFET

Query:  LEGLVSRPTQNLVTGDAADYVNEIAVGGIFRSK
        ++ L    TQN+ + DA D V +I VGGIFRSK
Subjt:  LEGLVSRPTQNLVTGDAADYVNEIAVGGIFRSK

XP_022156802.1 uncharacterized protein LOC111023635 [Momordica charantia]1.2e-2652.74Show/hide
Query:  MVVEAIEKIYHFIWKLRHNIVPCNLGDDES-PYYGQLYENEVEYEFQSDTEYDYDEYHTEDGVEDEDDQTEYENDEGNENDNGNKDELNDQPGNEGQLVN
        ++V+ +  +   I  L  N++ CNL DDE+    GQLYENEVEYEFQSD EYDYDEY TEDGVED D    Y+N  G E++   +D L++   NEGQ V+
Subjt:  MVVEAIEKIYHFIWKLRHNIVPCNLGDDES-PYYGQLYENEVEYEFQSDTEYDYDEYHTEDGVEDEDDQTEYENDEGNENDNGNKDELNDQPGNEGQLVN

Query:  ESYSVSRNTPFETLEGLVSRPTQNLVTGDAADYVNEIAVGGIFRSK
        ES++VS N P++T+E +V RP QN++TG+ +D++ EIAV GIFRSK
Subjt:  ESYSVSRNTPFETLEGLVSRPTQNLVTGDAADYVNEIAVGGIFRSK

XP_022156834.1 uncharacterized protein LOC111023667 [Momordica charantia]6.9e-3058.65Show/hide
Query:  IWKLRHNIVPCNLGDDESPYYGQLYENEVEYEFQSDTEYDYDEYHTEDGVEDEDDQTEYENDEGNENDNGNKDELNDQPGNEGQLVNESYSVSRNTPFET
        I  L  N++PCNL DDESPYYGQLYENEVEY+FQSD EYDYDEY TEDGVE  D    Y+N  G E++   +D L++   NEGQ V+ES+++S N P++T
Subjt:  IWKLRHNIVPCNLGDDESPYYGQLYENEVEYEFQSDTEYDYDEYHTEDGVEDEDDQTEYENDEGNENDNGNKDELNDQPGNEGQLVNESYSVSRNTPFET

Query:  LEGLVSRPTQNLVTGDAADYVNEIAVGGIFRSK
        +E +VSRP QN++TG+ +D++ EIAV GIF SK
Subjt:  LEGLVSRPTQNLVTGDAADYVNEIAVGGIFRSK

TrEMBL top hitse value%identityAlignment
A0A6J1DL12 uncharacterized protein LOC1110220774.1e-2052.63Show/hide
Query:  IVPCNLGDDESPYYGQLYENEVEYEFQSDTEYDYDEYHTEDGVEDEDDQTEYENDEGNENDNGNKDELN-------DQPGNEGQLVNESYSVSRNTPFET
        +VPCNL DD+ PYY +LYENEVEY+ +++ EYD  E     GVEDEDDQ E E +  + +DNGN DE+N       DQPGNEG+ V E  SVS N    T
Subjt:  IVPCNLGDDESPYYGQLYENEVEYEFQSDTEYDYDEYHTEDGVEDEDDQTEYENDEGNENDNGNKDELN-------DQPGNEGQLVNESYSVSRNTPFET

Query:  LEGLVSRPTQNLVTGDAADYVNEIAVGGIFRSK
        ++ L    TQN+ + DA D V +I VGGIFRSK
Subjt:  LEGLVSRPTQNLVTGDAADYVNEIAVGGIFRSK

A0A6J1DLB0 uncharacterized protein LOC1110219698.3e-0537.31Show/hide
Query:  FIWKLRHNIVPCNLGDDESPYYGQLYENEVEYEFQSDTEYDYDEYHTEDGVEDEDDQTEYENDEGNENDNGNKDELNDQPGNEGQLVNESYSVSRNTPFE
        F+  L  N+VPCNLGDDE  ++GQ       ++   D E D++     D +ED+DD  E E+++ NE D    + + D   +    V E  SVSRN P  
Subjt:  FIWKLRHNIVPCNLGDDESPYYGQLYENEVEYEFQSDTEYDYDEYHTEDGVEDEDDQTEYENDEGNENDNGNKDELNDQPGNEGQLVNESYSVSRNTPFE

Query:  TLEGLVSRPTQNLVTGDAADYVNEIAVGGIFRSK
        T+EG+ +   Q    G   D V++IA+G +FRSK
Subjt:  TLEGLVSRPTQNLVTGDAADYVNEIAVGGIFRSK

A0A6J1DSY0 uncharacterized protein LOC1110236355.9e-2752.74Show/hide
Query:  MVVEAIEKIYHFIWKLRHNIVPCNLGDDES-PYYGQLYENEVEYEFQSDTEYDYDEYHTEDGVEDEDDQTEYENDEGNENDNGNKDELNDQPGNEGQLVN
        ++V+ +  +   I  L  N++ CNL DDE+    GQLYENEVEYEFQSD EYDYDEY TEDGVED D    Y+N  G E++   +D L++   NEGQ V+
Subjt:  MVVEAIEKIYHFIWKLRHNIVPCNLGDDES-PYYGQLYENEVEYEFQSDTEYDYDEYHTEDGVEDEDDQTEYENDEGNENDNGNKDELNDQPGNEGQLVN

Query:  ESYSVSRNTPFETLEGLVSRPTQNLVTGDAADYVNEIAVGGIFRSK
        ES++VS N P++T+E +V RP QN++TG+ +D++ EIAV GIFRSK
Subjt:  ESYSVSRNTPFETLEGLVSRPTQNLVTGDAADYVNEIAVGGIFRSK

A0A6J1DUS4 uncharacterized protein LOC1110236673.3e-3058.65Show/hide
Query:  IWKLRHNIVPCNLGDDESPYYGQLYENEVEYEFQSDTEYDYDEYHTEDGVEDEDDQTEYENDEGNENDNGNKDELNDQPGNEGQLVNESYSVSRNTPFET
        I  L  N++PCNL DDESPYYGQLYENEVEY+FQSD EYDYDEY TEDGVE  D    Y+N  G E++   +D L++   NEGQ V+ES+++S N P++T
Subjt:  IWKLRHNIVPCNLGDDESPYYGQLYENEVEYEFQSDTEYDYDEYHTEDGVEDEDDQTEYENDEGNENDNGNKDELNDQPGNEGQLVNESYSVSRNTPFET

Query:  LEGLVSRPTQNLVTGDAADYVNEIAVGGIFRSK
        +E +VSRP QN++TG+ +D++ EIAV GIF SK
Subjt:  LEGLVSRPTQNLVTGDAADYVNEIAVGGIFRSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGTGGAAGCAATCGAGAAAATCTACCATTTTATTTGGAAACTCAGACATAACATTGTCCCATGTAACCTAGGGGATGACGAATCTCCATATTATGGTCAATTGTA
CGAGAATGAGGTTGAGTATGAGTTTCAGAGCGATACTGAGTATGATTATGATGAATATCATACCGAGGATGGGGTTGAGGATGAGGATGATCAGACAGAGTATGAGAATG
ATGAAGGAAATGAGAACGACAATGGAAACAAGGATGAGCTTAATGATCAACCTGGAAATGAAGGTCAACTTGTCAACGAGTCGTATTCAGTAAGTAGAAATACGCCTTTT
GAAACTCTTGAGGGATTAGTTTCCCGTCCAACGCAGAATCTCGTAACCGGTGATGCGGCTGATTATGTTAATGAAATCGCCGTTGGAGGTATCTTCCGTTCGAAGTACTT
GCCAAGCACGTTCTTTGCCAGTCACAACACTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGTGGAAGCAATCGAGAAAATCTACCATTTTATTTGGAAACTCAGACATAACATTGTCCCATGTAACCTAGGGGATGACGAATCTCCATATTATGGTCAATTGTA
CGAGAATGAGGTTGAGTATGAGTTTCAGAGCGATACTGAGTATGATTATGATGAATATCATACCGAGGATGGGGTTGAGGATGAGGATGATCAGACAGAGTATGAGAATG
ATGAAGGAAATGAGAACGACAATGGAAACAAGGATGAGCTTAATGATCAACCTGGAAATGAAGGTCAACTTGTCAACGAGTCGTATTCAGTAAGTAGAAATACGCCTTTT
GAAACTCTTGAGGGATTAGTTTCCCGTCCAACGCAGAATCTCGTAACCGGTGATGCGGCTGATTATGTTAATGAAATCGCCGTTGGAGGTATCTTCCGTTCGAAGTACTT
GCCAAGCACGTTCTTTGCCAGTCACAACACTTCTTGA
Protein sequenceShow/hide protein sequence
MVVEAIEKIYHFIWKLRHNIVPCNLGDDESPYYGQLYENEVEYEFQSDTEYDYDEYHTEDGVEDEDDQTEYENDEGNENDNGNKDELNDQPGNEGQLVNESYSVSRNTPF
ETLEGLVSRPTQNLVTGDAADYVNEIAVGGIFRSKYLPSTFFASHNTS