; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS025043 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025043
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAcetohydroxy-acid synthase small subunit
Genome locationscaffold247:696232..697787
RNA-Seq ExpressionMS025043
SyntenyMS025043
Gene Ontology termsGO:0009097 - isoleucine biosynthetic process (biological process)
GO:0009099 - valine biosynthetic process (biological process)
GO:0050790 - regulation of catalytic activity (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:1990610 - acetolactate synthase regulator activity (molecular function)
InterPro domainsIPR002912 - ACT domain
IPR004789 - Acetolactate synthase, small subunit
IPR039557 - AHAS, ACT domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038202.1 acetolactate synthase small subunit 1 [Cucumis melo var. makuwa]7.3e-5381.76Show/hide
Query:  MAAAVASSPAPVKPHNPCCSSVNFRSAFSKSLITNNFQKVKKWNRFHLQRLQLSSAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVF
        MAAAVA  PAPVK H P  S++  R  FS SLI   +QKV+KWNRF  QRLQ+SSAAVNDNAVTVT+S R +IRSTV RHTISVFVGDESGIINRIAGVF
Subjt:  MAAAVASSPAPVKPHNPCCSSVNFRSAFSKSLITNNFQKVKKWNRFHLQRLQLSSAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVF

Query:  ARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV
        ARRGYNIESLAVGLNKDKALFTIVV+GTENVLRQVVEQLNKLVNVIKV
Subjt:  ARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV

XP_022149970.1 acetolactate synthase small subunit 1, chloroplastic-like isoform X1 [Momordica charantia]4.1e-72100Show/hide
Query:  MAAAVASSPAPVKPHNPCCSSVNFRSAFSKSLITNNFQKVKKWNRFHLQRLQLSSAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVF
        MAAAVASSPAPVKPHNPCCSSVNFRSAFSKSLITNNFQKVKKWNRFHLQRLQLSSAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVF
Subjt:  MAAAVASSPAPVKPHNPCCSSVNFRSAFSKSLITNNFQKVKKWNRFHLQRLQLSSAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVF

Query:  ARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV
        ARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV
Subjt:  ARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV

XP_022149972.1 acetolactate synthase small subunit 2, chloroplastic-like isoform X2 [Momordica charantia]4.1e-72100Show/hide
Query:  MAAAVASSPAPVKPHNPCCSSVNFRSAFSKSLITNNFQKVKKWNRFHLQRLQLSSAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVF
        MAAAVASSPAPVKPHNPCCSSVNFRSAFSKSLITNNFQKVKKWNRFHLQRLQLSSAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVF
Subjt:  MAAAVASSPAPVKPHNPCCSSVNFRSAFSKSLITNNFQKVKKWNRFHLQRLQLSSAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVF

Query:  ARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV
        ARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV
Subjt:  ARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV

XP_038880022.1 acetolactate synthase small subunit 2, chloroplastic-like isoform X1 [Benincasa hispida]4.3e-5381.76Show/hide
Query:  MAAAVASSPAPVKPHNPCCSSVNFRSAFSKSLITNNFQKVKKWNRFHLQRLQLSSAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVF
        MAAAVA  P PVK H P  S+V  R+AFS SLI   +QKV+KWNRF L+RLQ+SSAAVNDNAVTV++S R  IRSTV RHTISVFVGDESGIINRIAGVF
Subjt:  MAAAVASSPAPVKPHNPCCSSVNFRSAFSKSLITNNFQKVKKWNRFHLQRLQLSSAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVF

Query:  ARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV
        ARRGYNIESLAVGLNKDKALFTIVV+GTENVLRQVVEQLNKLVNVIKV
Subjt:  ARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV

XP_038880023.1 acetolactate synthase small subunit 2, chloroplastic-like isoform X2 [Benincasa hispida]4.3e-5381.76Show/hide
Query:  MAAAVASSPAPVKPHNPCCSSVNFRSAFSKSLITNNFQKVKKWNRFHLQRLQLSSAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVF
        MAAAVA  P PVK H P  S+V  R+AFS SLI   +QKV+KWNRF L+RLQ+SSAAVNDNAVTV++S R  IRSTV RHTISVFVGDESGIINRIAGVF
Subjt:  MAAAVASSPAPVKPHNPCCSSVNFRSAFSKSLITNNFQKVKKWNRFHLQRLQLSSAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVF

Query:  ARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV
        ARRGYNIESLAVGLNKDKALFTIVV+GTENVLRQVVEQLNKLVNVIKV
Subjt:  ARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV

TrEMBL top hitse value%identityAlignment
A0A0A0M346 Acetohydroxy-acid synthase small subunit2.3e-5280.95Show/hide
Query:  MAAAVASSPAPVKPHNPCCSSVNFRSAFSKSLITNNFQKVKKWNRFHLQRLQLSSAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVF
        MAAAVA  PAPVK H P  S++  R  FS SLI   +Q+V+KWNRF  QRLQ+SSAAVNDNAVTVT+S R +IRSTV RHTISVFVGDESGIINRIAGVF
Subjt:  MAAAVASSPAPVKPHNPCCSSVNFRSAFSKSLITNNFQKVKKWNRFHLQRLQLSSAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVF

Query:  ARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIK
        ARRGYNIESLAVGLNKDKALFTIVV+GTENVLRQVVEQLNKLVNVIK
Subjt:  ARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIK

A0A1S3B8L7 Acetohydroxy-acid synthase small subunit3.5e-5381.76Show/hide
Query:  MAAAVASSPAPVKPHNPCCSSVNFRSAFSKSLITNNFQKVKKWNRFHLQRLQLSSAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVF
        MAAAVA  PAPVK H P  S++  R  FS SLI   +QKV+KWNRF  QRLQ+SSAAVNDNAVTVT+S R +IRSTV RHTISVFVGDESGIINRIAGVF
Subjt:  MAAAVASSPAPVKPHNPCCSSVNFRSAFSKSLITNNFQKVKKWNRFHLQRLQLSSAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVF

Query:  ARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV
        ARRGYNIESLAVGLNKDKALFTIVV+GTENVLRQVVEQLNKLVNVIKV
Subjt:  ARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV

A0A5A7T3Z5 Acetohydroxy-acid synthase small subunit3.5e-5381.76Show/hide
Query:  MAAAVASSPAPVKPHNPCCSSVNFRSAFSKSLITNNFQKVKKWNRFHLQRLQLSSAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVF
        MAAAVA  PAPVK H P  S++  R  FS SLI   +QKV+KWNRF  QRLQ+SSAAVNDNAVTVT+S R +IRSTV RHTISVFVGDESGIINRIAGVF
Subjt:  MAAAVASSPAPVKPHNPCCSSVNFRSAFSKSLITNNFQKVKKWNRFHLQRLQLSSAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVF

Query:  ARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV
        ARRGYNIESLAVGLNKDKALFTIVV+GTENVLRQVVEQLNKLVNVIKV
Subjt:  ARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV

A0A6J1D9G2 Acetohydroxy-acid synthase small subunit2.0e-72100Show/hide
Query:  MAAAVASSPAPVKPHNPCCSSVNFRSAFSKSLITNNFQKVKKWNRFHLQRLQLSSAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVF
        MAAAVASSPAPVKPHNPCCSSVNFRSAFSKSLITNNFQKVKKWNRFHLQRLQLSSAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVF
Subjt:  MAAAVASSPAPVKPHNPCCSSVNFRSAFSKSLITNNFQKVKKWNRFHLQRLQLSSAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVF

Query:  ARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV
        ARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV
Subjt:  ARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV

A0A6J1DA17 Acetohydroxy-acid synthase small subunit2.0e-72100Show/hide
Query:  MAAAVASSPAPVKPHNPCCSSVNFRSAFSKSLITNNFQKVKKWNRFHLQRLQLSSAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVF
        MAAAVASSPAPVKPHNPCCSSVNFRSAFSKSLITNNFQKVKKWNRFHLQRLQLSSAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVF
Subjt:  MAAAVASSPAPVKPHNPCCSSVNFRSAFSKSLITNNFQKVKKWNRFHLQRLQLSSAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVF

Query:  ARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV
        ARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV
Subjt:  ARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV

SwissProt top hitse value%identityAlignment
P65162 Acetolactate synthase small subunit1.8e-1454.79Show/hide
Query:  KRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLN--KDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV
        K HT+SV V D+ G++ R+A +F+RRG+NIESLAVG    KD++  TIVVS  +  L Q+ +QLNKL+NVIK+
Subjt:  KRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLN--KDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV

Q55141 Acetolactate synthase small subunit6.3e-1559.72Show/hide
Query:  RHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNK--DKALFTIVVSGTENVLRQVVEQLNKLVNVIKV
        +HT+SV V DE+G++ RIAG+FARRG+NIESLAVG  +  D +  T+VV G EN + Q+ +QL KLVNVIKV
Subjt:  RHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNK--DKALFTIVVSGTENVLRQVVEQLNKLVNVIKV

Q93YZ7 Acetolactate synthase small subunit 2, chloroplastic4.9e-2877.11Show/hide
Query:  TESPRSAIRSTVKRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV
        +E+  +  +S V++HTISVFVGDESG+INRIAGVFARRGYNIESLAVGLN+DKALFTIVV GTE VL+QV+EQL KLVNV+KV
Subjt:  TESPRSAIRSTVKRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV

Q9FFF4 Acetolactate synthase small subunit 1, chloroplastic4.8e-3177.66Show/hide
Query:  SAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV
        SAA  D A+T  +S        V+RHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLN+DKALFTIVV GT+ VL+QVVEQLNKLVNVIKV
Subjt:  SAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV

Q9SMC2 Acetolactate synthase small subunit 1, chloroplastic3.8e-2091.23Show/hide
Query:  IINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV
        +INRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTE VL+QV+EQL KLVNVIKV
Subjt:  IINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV

Arabidopsis top hitse value%identityAlignment
AT2G31810.1 ACT domain-containing small subunit of acetolactate synthase protein3.5e-2977.11Show/hide
Query:  TESPRSAIRSTVKRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV
        +E+  +  +S V++HTISVFVGDESG+INRIAGVFARRGYNIESLAVGLN+DKALFTIVV GTE VL+QV+EQL KLVNV+KV
Subjt:  TESPRSAIRSTVKRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV

AT2G31810.2 ACT domain-containing small subunit of acetolactate synthase protein5.3e-1786Show/hide
Query:  VFARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV
        VFARRGYNIESLAVGLN+DKALFTIVV GTE VL+QV+EQL KLVNV+KV
Subjt:  VFARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV

AT2G31810.3 ACT domain-containing small subunit of acetolactate synthase protein3.5e-2977.11Show/hide
Query:  TESPRSAIRSTVKRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV
        +E+  +  +S V++HTISVFVGDESG+INRIAGVFARRGYNIESLAVGLN+DKALFTIVV GTE VL+QV+EQL KLVNV+KV
Subjt:  TESPRSAIRSTVKRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV

AT5G16290.1 VALINE-TOLERANT 13.4e-3277.66Show/hide
Query:  SAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV
        SAA  D A+T  +S        V+RHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLN+DKALFTIVV GT+ VL+QVVEQLNKLVNVIKV
Subjt:  SAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV

AT5G16290.2 VALINE-TOLERANT 13.4e-3277.66Show/hide
Query:  SAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV
        SAA  D A+T  +S        V+RHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLN+DKALFTIVV GT+ VL+QVVEQLNKLVNVIKV
Subjt:  SAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGCCGTAGCCTCCTCCCCAGCTCCCGTAAAACCTCACAACCCTTGCTGTTCATCAGTTAACTTCAGAAGTGCGTTCTCCAAAAGTTTGATCACTAACAACTT
CCAGAAAGTGAAGAAATGGAACCGTTTCCATCTCCAAAGGCTGCAGCTCTCTTCTGCTGCTGTTAATGATAATGCAGTGACTGTAACCGAATCCCCCCGTTCTGCCATTC
GTTCTACGGTGAAGCGACATACTATATCTGTGTTTGTCGGTGATGAAAGTGGAATAATAAACCGAATTGCGGGTGTCTTTGCTAGGAGAGGTTACAACATTGAGTCCCTT
GCTGTTGGATTGAATAAGGATAAGGCTCTCTTTACCATTGTTGTTAGTGGAACAGAAAATGTCTTGAGACAAGTTGTGGAGCAGCTAAACAAACTTGTCAATGTTATCAA
GGTTTGGTTCATCCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCGCCGTAGCCTCCTCCCCAGCTCCCGTAAAACCTCACAACCCTTGCTGTTCATCAGTTAACTTCAGAAGTGCGTTCTCCAAAAGTTTGATCACTAACAACTT
CCAGAAAGTGAAGAAATGGAACCGTTTCCATCTCCAAAGGCTGCAGCTCTCTTCTGCTGCTGTTAATGATAATGCAGTGACTGTAACCGAATCCCCCCGTTCTGCCATTC
GTTCTACGGTGAAGCGACATACTATATCTGTGTTTGTCGGTGATGAAAGTGGAATAATAAACCGAATTGCGGGTGTCTTTGCTAGGAGAGGTTACAACATTGAGTCCCTT
GCTGTTGGATTGAATAAGGATAAGGCTCTCTTTACCATTGTTGTTAGTGGAACAGAAAATGTCTTGAGACAAGTTGTGGAGCAGCTAAACAAACTTGTCAATGTTATCAA
GGTTTGGTTCATCCTTTAG
Protein sequenceShow/hide protein sequence
MAAAVASSPAPVKPHNPCCSSVNFRSAFSKSLITNNFQKVKKWNRFHLQRLQLSSAAVNDNAVTVTESPRSAIRSTVKRHTISVFVGDESGIINRIAGVFARRGYNIESL
AVGLNKDKALFTIVVSGTENVLRQVVEQLNKLVNVIKVWFIL