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MS025048 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025048
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAcetohydroxy-acid synthase small subunit
Genome locationscaffold247:727596..729002
RNA-Seq ExpressionMS025048
SyntenyMS025048
Gene Ontology termsGO:0009097 - isoleucine biosynthetic process (biological process)
GO:0009099 - valine biosynthetic process (biological process)
GO:0050790 - regulation of catalytic activity (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:1990610 - acetolactate synthase regulator activity (molecular function)
InterPro domainsIPR004789 - Acetolactate synthase, small subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038202.1 acetolactate synthase small subunit 1 [Cucumis melo var. makuwa]6.2e-1668.12Show/hide
Query:  DLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASSTVCTPVLFHESF
        +L     IALRREKMGETAPFWRFSAASYPDLEDSRP+D+F GDAIQS NG    S+    PV  +ESF
Subjt:  DLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASSTVCTPVLFHESF
XP_008443657.1 PREDICTED: acetolactate synthase small subunit 1, chloroplastic-like [Cucumis melo]6.2e-1668.12Show/hide
Query:  DLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASSTVCTPVLFHESF
        +L     IALRREKMGETAPFWRFSAASYPDLEDSRP+D+F GDAIQS NG    S+    PV  +ESF
Subjt:  DLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASSTVCTPVLFHESF
XP_022149970.1 acetolactate synthase small subunit 1, chloroplastic-like isoform X1 [Momordica charantia]9.3e-2089.66Show/hide
Query:  DLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASST
        +L     IALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASST
Subjt:  DLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASST
XP_022149972.1 acetolactate synthase small subunit 2, chloroplastic-like isoform X2 [Momordica charantia]9.3e-2089.66Show/hide
Query:  DLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASST
        +L     IALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASST
Subjt:  DLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASST
XP_038880022.1 acetolactate synthase small subunit 2, chloroplastic-like isoform X1 [Benincasa hispida]1.1e-1568.12Show/hide
Query:  DLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASSTVCTPVLFHESF
        +L     IALRREKMGETAPFWRFSAASYPDLEDSRP+D F GDAIQSLNG    S+    PV  +E F
Subjt:  DLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASSTVCTPVLFHESF
TrEMBL top hitse value%identityAlignment
A0A1S3B8L7 Acetohydroxy-acid synthase small subunit3.0e-1668.12Show/hide
Query:  DLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASSTVCTPVLFHESF
        +L     IALRREKMGETAPFWRFSAASYPDLEDSRP+D+F GDAIQS NG    S+    PV  +ESF
Subjt:  DLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASSTVCTPVLFHESF
A0A5A7T3Z5 Acetohydroxy-acid synthase small subunit3.0e-1668.12Show/hide
Query:  DLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASSTVCTPVLFHESF
        +L     IALRREKMGETAPFWRFSAASYPDLEDSRP+D+F GDAIQS NG    S+    PV  +ESF
Subjt:  DLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASSTVCTPVLFHESF
A0A6J1D9G2 Acetohydroxy-acid synthase small subunit4.5e-2089.66Show/hide
Query:  DLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASST
        +L     IALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASST
Subjt:  DLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASST
A0A6J1DA17 Acetohydroxy-acid synthase small subunit4.5e-2089.66Show/hide
Query:  DLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASST
        +L     IALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASST
Subjt:  DLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASST
A0A6J1L3C2 Acetohydroxy-acid synthase small subunit6.7e-1664.29Show/hide
Query:  EDLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASSTVCTPVLFHESF
        ++L     IALRREKMGETAPFWRFSAASYPDLEDSRP++ F GD+IQS+NGN   S+    PV  +E+F
Subjt:  EDLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASSTVCTPVLFHESF
SwissProt top hitse value%identityAlignment
Q93YZ7 Acetolactate synthase small subunit 2, chloroplastic3.8e-0880.65Show/hide
Query:  IALRREKMGETAPFWRFSAASYPDLEDSRPI
        IALRREKMG TAPFWRFSAASYPDL++  P+
Subjt:  IALRREKMGETAPFWRFSAASYPDLEDSRPI
Q9FFF4 Acetolactate synthase small subunit 1, chloroplastic1.3e-0853.45Show/hide
Query:  EDLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASS
        +++     IALRREKMGETAPFWRFSAASYP L      +        +L GNG ASS
Subjt:  EDLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASS
Q9SMC2 Acetolactate synthase small subunit 1, chloroplastic6.5e-0856.25Show/hide
Query:  IALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLA
        IALRREKMGE+APFWRFSAASYPDLE +      +    ++ NG  ++
Subjt:  IALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLA
Arabidopsis top hitse value%identityAlignment
AT2G31810.1 ACT domain-containing small subunit of acetolactate synthase protein2.7e-0980.65Show/hide
Query:  IALRREKMGETAPFWRFSAASYPDLEDSRPI
        IALRREKMG TAPFWRFSAASYPDL++  P+
Subjt:  IALRREKMGETAPFWRFSAASYPDLEDSRPI
AT2G31810.2 ACT domain-containing small subunit of acetolactate synthase protein2.7e-0980.65Show/hide
Query:  IALRREKMGETAPFWRFSAASYPDLEDSRPI
        IALRREKMG TAPFWRFSAASYPDL++  P+
Subjt:  IALRREKMGETAPFWRFSAASYPDLEDSRPI
AT2G31810.3 ACT domain-containing small subunit of acetolactate synthase protein2.7e-0980.65Show/hide
Query:  IALRREKMGETAPFWRFSAASYPDLEDSRPI
        IALRREKMG TAPFWRFSAASYPDL++  P+
Subjt:  IALRREKMGETAPFWRFSAASYPDLEDSRPI
AT5G16290.1 VALINE-TOLERANT 19.3e-1053.45Show/hide
Query:  EDLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASS
        +++     IALRREKMGETAPFWRFSAASYP L      +        +L GNG ASS
Subjt:  EDLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASS
AT5G16290.2 VALINE-TOLERANT 19.3e-1053.45Show/hide
Query:  EDLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASS
        +++     IALRREKMGETAPFWRFSAASYP L      +        +L GNG ASS
Subjt:  EDLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCATTTTTGTAGCTCGGAGGATTTGACTTTAGTTGCTTTGATAGCACTGAGAAGGGAGAAAATGGGGGAGACAGCTCCCTTTTGGAGATTCTCAGCGGCTTCTTA
TCCTGATCTTGAAGATTCGAGGCCTATTGATGCCTTTACTGGGGATGCAATTCAATCACTCAATGGCAATGGCCTTGCCTCCTCAACTGTATGTACTCCTGTTCTTTTCC
ATGAAAGCTTTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTGCATTTTTGTAGCTCGGAGGATTTGACTTTAGTTGCTTTGATAGCACTGAGAAGGGAGAAAATGGGGGAGACAGCTCCCTTTTGGAGATTCTCAGCGGCTTCTTA
TCCTGATCTTGAAGATTCGAGGCCTATTGATGCCTTTACTGGGGATGCAATTCAATCACTCAATGGCAATGGCCTTGCCTCCTCAACTGTATGTACTCCTGTTCTTTTCC
ATGAAAGCTTTGTTTAA
Protein sequenceShow/hide protein sequence
MLHFCSSEDLTLVALIALRREKMGETAPFWRFSAASYPDLEDSRPIDAFTGDAIQSLNGNGLASSTVCTPVLFHESFV