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MS025052 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025052
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionABC transporter B family member 15-like
Genome locationscaffold123_1:125340..125585
RNA-Seq ExpressionMS025052
SyntenyMS025052
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsIPR036640 - ABC transporter type 1, transmembrane domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602466.1 ABC transporter B family member 15, partial [Cucurbita argyrosperma subsp. sororia]9.7e-1258.11Show/hide
Query:  KENGDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTSDSS
        KENG+      GI+ K K S W +A IFM+ADA+DKFLM LGFI A+GDGF +PL+L +++R MNNIG TS +S
Subjt:  KENGDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTSDSS

XP_022133729.1 ABC transporter B family member 15-like, partial [Momordica charantia]8.2e-1967.95Show/hide
Query:  KENGDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTSDSSSDSL
        KENGDQM RGSG KKKMK SGWSI  IFM+ADA+DKFLMALGFI A+GDG  +PL+L +++R MNNIGF S S    +
Subjt:  KENGDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTSDSSSDSL

XP_022964967.1 ABC transporter B family member 15-like [Cucurbita moschata]9.7e-1258.11Show/hide
Query:  KENGDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTSDSS
        KENG+      GI+ K K S W +A IFM+ADA+DKFLM LGFI A+GDGF +PL+L +++R MNNIG TS +S
Subjt:  KENGDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTSDSS

XP_022990825.1 ABC transporter B family member 15-like [Cucurbita maxima]9.7e-1258.11Show/hide
Query:  KENGDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTSDSS
        KENG+      GI+ K K S W +A IFM+ADA+DKFLM LGFI A+GDGF +PL+L +++R MNNIG TS +S
Subjt:  KENGDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTSDSS

XP_023517420.1 ABC transporter B family member 15-like isoform X1 [Cucurbita pepo subsp. pepo]4.3e-1259.46Show/hide
Query:  KENGDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTSDSS
        KENG+      GI+ K K S W +A IFM+ADA+DKFLM LGFI AIGDGF +PL+L +++R MNNIG TS +S
Subjt:  KENGDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTSDSS

TrEMBL top hitse value%identityAlignment
A0A0A0KU14 Uncharacterized protein1.4e-1154.05Show/hide
Query:  KENGDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTSDSS
        KE      R S      K  GW +A IFM+ADA+DKFLM LGFI A+GDGF +PL+L +++  MNNIG TS SS
Subjt:  KENGDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTSDSS

A0A5A7T3R5 ABC transporter B family member 15-like4.0e-1153.33Show/hide
Query:  KENGDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTSDSSS
        KE      R S      K   W +A IFM+ADA+DKFLM LGFI AIGDG  +PL+L +++R MNNIG TS +SS
Subjt:  KENGDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTSDSSS

A0A6J1BWU3 ABC transporter B family member 15-like4.0e-1967.95Show/hide
Query:  KENGDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTSDSSSDSL
        KENGDQM RGSG KKKMK SGWSI  IFM+ADA+DKFLMALGFI A+GDG  +PL+L +++R MNNIGF S S    +
Subjt:  KENGDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTSDSSSDSL

A0A6J1HJ31 ABC transporter B family member 15-like4.7e-1258.11Show/hide
Query:  KENGDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTSDSS
        KENG+      GI+ K K S W +A IFM+ADA+DKFLM LGFI A+GDGF +PL+L +++R MNNIG TS +S
Subjt:  KENGDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTSDSS

A0A6J1JR61 ABC transporter B family member 15-like4.7e-1258.11Show/hide
Query:  KENGDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTSDSS
        KENG+      GI+ K K S W +A IFM+ADA+DKFLM LGFI A+GDGF +PL+L +++R MNNIG TS +S
Subjt:  KENGDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTSDSS

SwissProt top hitse value%identityAlignment
Q9LHD1 ABC transporter B family member 152.3e-0844.87Show/hide
Query:  GDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIG---FTSDSSSDSL
        G +  + SG + KM   G S+  IFM+AD +D  LM LG I A+GDGF +PL+L +T++ MNNIG   F +D+   S+
Subjt:  GDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIG---FTSDSSSDSL

Q9LSJ2 ABC transporter B family member 224.8e-0649.09Show/hide
Query:  MKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTS
        MK  G S+  IFM+A+++D  LM LG I A+GDGF +P+I F+T   +N+IG +S
Subjt:  MKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTS

Q9LSJ5 ABC transporter B family member 181.5e-0750.91Show/hide
Query:  MKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTS
        M  S  SI  IFM+AD +D  LMALG I A+GDGF +P+I F+ ++ +NN+G +S
Subjt:  MKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTS

Q9LSJ6 ABC transporter B family member 174.0e-0846.48Show/hide
Query:  GDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTSDSS
        G +  + SG + KMK  G SI  IFM+AD +D  LMALG I A+GDGF +P+++F+ N  +NN+G +S ++
Subjt:  GDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTSDSS

Q9LSJ8 ABC transporter B family member 161.8e-0547.06Show/hide
Query:  MSGW-SIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIG
        M  W S+  IFM+AD +D  LM LG I A+GDGF +P++ F+T   +N+ G
Subjt:  MSGW-SIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIG

Arabidopsis top hitse value%identityAlignment
AT3G28345.1 ABC transporter family protein1.6e-0944.87Show/hide
Query:  GDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIG---FTSDSSSDSL
        G +  + SG + KM   G S+  IFM+AD +D  LM LG I A+GDGF +PL+L +T++ MNNIG   F +D+   S+
Subjt:  GDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIG---FTSDSSSDSL

AT3G28360.1 P-glycoprotein 161.3e-0647.06Show/hide
Query:  MSGW-SIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIG
        M  W S+  IFM+AD +D  LM LG I A+GDGF +P++ F+T   +N+ G
Subjt:  MSGW-SIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIG

AT3G28380.1 P-glycoprotein 172.8e-0946.48Show/hide
Query:  GDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTSDSS
        G +  + SG + KMK  G SI  IFM+AD +D  LMALG I A+GDGF +P+++F+ N  +NN+G +S ++
Subjt:  GDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTSDSS

AT3G28390.1 P-glycoprotein 181.1e-0850.91Show/hide
Query:  MKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTS
        M  S  SI  IFM+AD +D  LMALG I A+GDGF +P+I F+ ++ +NN+G +S
Subjt:  MKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTS

AT3G28415.1 ABC transporter family protein3.4e-0749.09Show/hide
Query:  MKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTS
        MK  G S+  IFM+A+++D  LM LG I A+GDGF +P+I F+T   +N+IG +S
Subjt:  MKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAGAAAAGAAAATGGAGATCAGATGGCTAGGGGATCAGGGATCAAGAAGAAGATGAAGATGAGTGGGTGGTCGATAGCTTTGATTTTCATGTACGCAGACGCCAT
GGACAAGTTTCTGATGGCGTTGGGGTTCATCGAAGCCATTGGTGATGGCTTCCCGAGCCCCTTGATTTTATTTCTCACCAACCGTACGATGAACAACATCGGCTTCACCT
CAGACTCTTCTTCAGATTCTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGATCAGAAAAGAAAATGGAGATCAGATGGCTAGGGGATCAGGGATCAAGAAGAAGATGAAGATGAGTGGGTGGTCGATAGCTTTGATTTTCATGTACGCAGACGCCAT
GGACAAGTTTCTGATGGCGTTGGGGTTCATCGAAGCCATTGGTGATGGCTTCCCGAGCCCCTTGATTTTATTTCTCACCAACCGTACGATGAACAACATCGGCTTCACCT
CAGACTCTTCTTCAGATTCTTTATAA
Protein sequenceShow/hide protein sequence
MIRKENGDQMARGSGIKKKMKMSGWSIALIFMYADAMDKFLMALGFIEAIGDGFPSPLILFLTNRTMNNIGFTSDSSSDSL