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MS025060 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025060
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTranscription factor GTE9 isoform X4
Genome locationscaffold327:205185..207549
RNA-Seq ExpressionMS025060
SyntenyMS025060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061663.1 transcription factor GTE9 isoform X4 [Cucumis melo var. makuwa]9.0e-0735.37Show/hide
Query:  KPAEATTPTPTSITTPRQISTPPSPSTAPRVTMLKARFADTILKAQRQLCIND-VPCAVKP---------------------------------------
        KP +A  PTPT  TTP   +   + +   RV+MLK RFA TILKAQ+QL   + + C V+                                        
Subjt:  KPAEATTPTPTSITTPRQISTPPSPSTAPRVTMLKARFADTILKAQRQLCIND-VPCAVKP---------------------------------------

Query:  -DVIEKLVVK-------PSTIEELRRALREVLEEVERTVEVEDSHKSLEDLERLCGFLVPSSDG
         + + K+V +       PS+ EE+R+A R  LEE+ER+V++EDSHKS++DLERLCG+ +P   G
Subjt:  -DVIEKLVVK-------PSTIEELRRALREVLEEVERTVEVEDSHKSLEDLERLCGFLVPSSDG
KAG6571342.1 hypothetical protein SDJN03_30257, partial [Cucurbita argyrosperma subsp. sororia]3.8e-0534.81Show/hide
Query:  AKIPQKPAEATTPTPTSITTPRQISTPPSPSTAP----RVTMLKARFADTILKAQRQLCIN---------------------------DVPCAVKPDVIE
        AK P      T+ T      P  I   P+PS++     R  +LK +FA TI KAQR L  N                            +  +++ D I 
Subjt:  AKIPQKPAEATTPTPTSITTPRQISTPPSPSTAP----RVTMLKARFADTILKAQRQLCIN---------------------------DVPCAVKPDVIE

Query:  KLVVKPSTIEELRRALREVLEEVERTVEVEDSHKSLEDLERLCGFLVPSSDGLIPRHH
         L V+    EE+R A R  LEEVER V V+DSH SL + ERLCGF +P   G + R H
Subjt:  KLVVKPSTIEELRRALREVLEEVERTVEVEDSHKSLEDLERLCGFLVPSSDGLIPRHH
TrEMBL top hitse value%identityAlignment
A0A0A0KGL2 Uncharacterized protein1.3e-0633.7Show/hide
Query:  VAKIPQKPAEATTPTPTSITTPRQISTPPSPSTAPRVTMLKARFADTILKAQRQLC--------------------------------------------
        V  I ++P +A  PTPT  TTP  ++         RV+MLK+RFA TILKAQ+QL                                             
Subjt:  VAKIPQKPAEATTPTPTSITTPRQISTPPSPSTAPRVTMLKARFADTILKAQRQLC--------------------------------------------

Query:  ---------INDVPC--AVKPDVIEKLVVKPSTI----EELRRALREVLEEVERTVEVEDSHKSLEDLERLCGFLVPSSDG
                  N+ P    V+  +  K+ + P+ I    EE+RRA R+ LE++ER+V+VEDSHKS++DLERLCG+ +PS  G
Subjt:  ---------INDVPC--AVKPDVIEKLVVKPSTI----EELRRALREVLEEVERTVEVEDSHKSLEDLERLCGFLVPSSDG
A0A5D3DC97 Transcription factor GTE9 isoform X44.3e-0735.37Show/hide
Query:  KPAEATTPTPTSITTPRQISTPPSPSTAPRVTMLKARFADTILKAQRQLCIND-VPCAVKP---------------------------------------
        KP +A  PTPT  TTP   +   + +   RV+MLK RFA TILKAQ+QL   + + C V+                                        
Subjt:  KPAEATTPTPTSITTPRQISTPPSPSTAPRVTMLKARFADTILKAQRQLCIND-VPCAVKP---------------------------------------

Query:  -DVIEKLVVK-------PSTIEELRRALREVLEEVERTVEVEDSHKSLEDLERLCGFLVPSSDG
         + + K+V +       PS+ EE+R+A R  LEE+ER+V++EDSHKS++DLERLCG+ +P   G
Subjt:  -DVIEKLVVK-------PSTIEELRRALREVLEEVERTVEVEDSHKSLEDLERLCGFLVPSSDG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATGAAGATGAAGGGCGTTGAGAAAGATGTTTCGTATTTAAGAAGTCTTATTCTATGCGAAAGATTGACTGCTAAACCACCAAAGAAGAAGTTGATCAAGAAAGA
GATCTCCATAAAATCTTATGACCGCATTTTCGCATCGGAGACCCTAGACAATGTAAAGCCAAAGATAAGAACGACTAGGGTGAGTTCTGGGCCAGTGAAACCGCAACTAG
TTTCTTGTGCTGATTTGGCAGCAAATATAGTGAAATGTGGAGATTTGGTAGCAAAGATACCACAAAAACCAGCTGAAGCCACAACTCCAACACCAACCTCAATCACAACA
CCACGGCAGATTAGTACTCCACCCTCACCCAGCACAGCTCCTCGAGTAACAATGCTGAAAGCAAGGTTCGCCGATACGATCTTGAAAGCACAGCGGCAGCTTTGCATCAA
TGATGTGCCATGTGCTGTGAAGCCGGATGTGATTGAAAAATTAGTTGTTAAGCCATCTACAATTGAAGAACTGAGGCGAGCACTGCGAGAAGTTTTGGAAGAGGTGGAAC
GGACTGTAGAGGTGGAAGATAGCCATAAATCCCTCGAAGATTTAGAGCGTCTTTGTGGATTTCTCGTACCTTCCTCTGATGGCCTGATTCCTCGACACCATGCGCTTCTA
TGGTTTATATTTGAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATGAAGATGAAGGGCGTTGAGAAAGATGTTTCGTATTTAAGAAGTCTTATTCTATGCGAAAGATTGACTGCTAAACCACCAAAGAAGAAGTTGATCAAGAAAGA
GATCTCCATAAAATCTTATGACCGCATTTTCGCATCGGAGACCCTAGACAATGTAAAGCCAAAGATAAGAACGACTAGGGTGAGTTCTGGGCCAGTGAAACCGCAACTAG
TTTCTTGTGCTGATTTGGCAGCAAATATAGTGAAATGTGGAGATTTGGTAGCAAAGATACCACAAAAACCAGCTGAAGCCACAACTCCAACACCAACCTCAATCACAACA
CCACGGCAGATTAGTACTCCACCCTCACCCAGCACAGCTCCTCGAGTAACAATGCTGAAAGCAAGGTTCGCCGATACGATCTTGAAAGCACAGCGGCAGCTTTGCATCAA
TGATGTGCCATGTGCTGTGAAGCCGGATGTGATTGAAAAATTAGTTGTTAAGCCATCTACAATTGAAGAACTGAGGCGAGCACTGCGAGAAGTTTTGGAAGAGGTGGAAC
GGACTGTAGAGGTGGAAGATAGCCATAAATCCCTCGAAGATTTAGAGCGTCTTTGTGGATTTCTCGTACCTTCCTCTGATGGCCTGATTCCTCGACACCATGCGCTTCTA
TGGTTTATATTTGAAGAATGA
Protein sequenceShow/hide protein sequence
MKMKMKGVEKDVSYLRSLILCERLTAKPPKKKLIKKEISIKSYDRIFASETLDNVKPKIRTTRVSSGPVKPQLVSCADLAANIVKCGDLVAKIPQKPAEATTPTPTSITT
PRQISTPPSPSTAPRVTMLKARFADTILKAQRQLCINDVPCAVKPDVIEKLVVKPSTIEELRRALREVLEEVERTVEVEDSHKSLEDLERLCGFLVPSSDGLIPRHHALL
WFIFEE