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MS025066 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025066
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCYSTM domain-containing protein
Genome locationscaffold404:129917..130473
RNA-Seq ExpressionMS025066
SyntenyMS025066
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031406.1 cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa]1.8e-2368.27Show/hide
Query:  MSDPKYGYPYPPPQGGYYQGPPVMAPPQYAVPPPKRQPGFLEGWYAKATLGLGFGFDFGFVLTEVGFCLVVVVAALLLCAAAVSLMSAAVTLPSYFLLDV
        MSDPKY YPYPPPQGGYYQGPPVMAPPQYA PPPKRQPGFLEGW         FGF    V    GF    V AAL L AAAVSLM+AAVTLP  FLLD 
Subjt:  MSDPKYGYPYPPPQGGYYQGPPVMAPPQYAVPPPKRQPGFLEGWYAKATLGLGFGFDFGFVLTEVGFCLVVVVAALLLCAAAVSLMSAAVTLPSYFLLDV

Query:  NQSF
         + F
Subjt:  NQSF

KAF9609677.1 hypothetical protein IFM89_017856 [Coptis chinensis]9.2e-1280.43Show/hide
Query:  MSDPKYGYPYPPPQGGYYQGPPVMAPPQYAVPPPKRQPGFLEGWYA
        M+DPKY YPYP P  GYYQGPPVMAPPQYA PPP+RQPGFLEG  A
Subjt:  MSDPKYGYPYPPPQGGYYQGPPVMAPPQYAVPPPKRQPGFLEGWYA

KAG6571885.1 hypothetical protein SDJN03_28613, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1489.13Show/hide
Query:  MSDPKYGYPYPPPQGGYYQGPPVMAPPQYAVPPPKRQPGFLEGWYA
        MSDPKY YPYPPP GGYYQGPPVMAPPQYA PPPKRQPGFLEG  A
Subjt:  MSDPKYGYPYPPPQGGYYQGPPVMAPPQYAVPPPKRQPGFLEGWYA

KGN43811.1 hypothetical protein Csa_017361 [Cucumis sativus]8.1e-1650.83Show/hide
Query:  MSDPKYGYPYPPPQGGYYQGPPVMAPPQYAVPPPKRQPGFLEGWYAKATLGLGFGFDFGFVLTEVGFCLVVVVAALLLCAAAVSLMSAAVTLPSYFLLDV
        MSDPKY YPYPPPQGGYYQGPPVMAPPQYA PPP+RQP                                    AL L AAAVSLM+AAVTLP  FLLD 
Subjt:  MSDPKYGYPYPPPQGGYYQGPPVMAPPQYAVPPPKRQPGFLEGWYAKATLGLGFGFDFGFVLTEVGFCLVVVVAALLLCAAAVSLMSAAVTLPSYFLLDV

Query:  NQSF----AHSDSKASRFFG
         + F    AH+    + FFG
Subjt:  NQSF----AHSDSKASRFFG

PQP99874.1 uncharacterized protein Pyn_05607 [Prunus yedoensis var. nudiflora]5.4e-1282.98Show/hide
Query:  MSDPKYGYPYPPP-QGGYYQGPPVMAPPQYAVPPPKRQPGFLEGWYA
        MSDPKYGYPYP   QGGYYQGPPVMAPPQYA PPP+R+PGFLEG  A
Subjt:  MSDPKYGYPYPPP-QGGYYQGPPVMAPPQYAVPPPKRQPGFLEGWYA

TrEMBL top hitse value%identityAlignment
A0A0A0K7L8 Uncharacterized protein3.9e-1650.83Show/hide
Query:  MSDPKYGYPYPPPQGGYYQGPPVMAPPQYAVPPPKRQPGFLEGWYAKATLGLGFGFDFGFVLTEVGFCLVVVVAALLLCAAAVSLMSAAVTLPSYFLLDV
        MSDPKY YPYPPPQGGYYQGPPVMAPPQYA PPP+RQP                                    AL L AAAVSLM+AAVTLP  FLLD 
Subjt:  MSDPKYGYPYPPPQGGYYQGPPVMAPPQYAVPPPKRQPGFLEGWYAKATLGLGFGFDFGFVLTEVGFCLVVVVAALLLCAAAVSLMSAAVTLPSYFLLDV

Query:  NQSF----AHSDSKASRFFG
         + F    AH+    + FFG
Subjt:  NQSF----AHSDSKASRFFG

A0A314Y8T5 CYSTM domain-containing protein2.6e-1282.98Show/hide
Query:  MSDPKYGYPYPPP-QGGYYQGPPVMAPPQYAVPPPKRQPGFLEGWYA
        MSDPKYGYPYP   QGGYYQGPPVMAPPQYA PPP+R+PGFLEG  A
Subjt:  MSDPKYGYPYPPP-QGGYYQGPPVMAPPQYAVPPPKRQPGFLEGWYA

A0A540KWR0 CYSTM domain-containing protein1.7e-1172.55Show/hide
Query:  MSDPKYGYPYP-----PPQGGYYQGPPVMAPPQYAVPPPKRQPGFLEGWYA
        M+D KYGYPYP     PPQGGYYQGPPV+APPQY  PPP+R+PGFLEG  A
Subjt:  MSDPKYGYPYP-----PPQGGYYQGPPVMAPPQYAVPPPKRQPGFLEGWYA

A0A5A7SN04 Cysteine-rich and transmembrane domain-containing protein A-like8.7e-2468.27Show/hide
Query:  MSDPKYGYPYPPPQGGYYQGPPVMAPPQYAVPPPKRQPGFLEGWYAKATLGLGFGFDFGFVLTEVGFCLVVVVAALLLCAAAVSLMSAAVTLPSYFLLDV
        MSDPKY YPYPPPQGGYYQGPPVMAPPQYA PPPKRQPGFLEGW         FGF    V    GF    V AAL L AAAVSLM+AAVTLP  FLLD 
Subjt:  MSDPKYGYPYPPPQGGYYQGPPVMAPPQYAVPPPKRQPGFLEGWYAKATLGLGFGFDFGFVLTEVGFCLVVVVAALLLCAAAVSLMSAAVTLPSYFLLDV

Query:  NQSF
         + F
Subjt:  NQSF

A0A6J5XT78 CYSTM domain-containing protein5.8e-1280.85Show/hide
Query:  MSDPKYGYPYPPP-QGGYYQGPPVMAPPQYAVPPPKRQPGFLEGWYA
        M+DPKYGYPYP   QGGYYQGPPVMAPPQYA PPP+R+PGFLEG  A
Subjt:  MSDPKYGYPYPPP-QGGYYQGPPVMAPPQYAVPPPKRQPGFLEGWYA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G33660.1 unknown protein2.1e-0657.14Show/hide
Query:  MSDPKYGYPYPPPQGGYYQG--PPVMAPPQY--------AVPPPKRQPGFLEGWYA
        MSDPKY YPYP P G Y QG  PPV  PPQY          PPP R+ GFLEG  A
Subjt:  MSDPKYGYPYPPPQGGYYQG--PPVMAPPQY--------AVPPPKRQPGFLEGWYA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGATCCAAAATATGGCTATCCTTACCCACCTCCTCAAGGAGGTTATTATCAAGGGCCGCCCGTGATGGCGCCACCGCAATACGCGGTGCCACCACCGAAAAGGCA
GCCAGGCTTCTTGGAGGGATGGTATGCCAAAGCAACTCTCGGTCTCGGTTTCGGTTTCGATTTTGGTTTTGTTTTGACAGAGGTTGGGTTTTGTTTGGTTGTTGTTGTTG
CAGCCTTGCTGCTCTGTGCTGCTGCTGTCTCCTTGATGAGTGCTGCTGTGACCCTTCCATCATATTTCTTGCTTGATGTCAATCAAAGCTTTGCCCATTCTGATTCAAAG
GCTTCTCGTTTCTTTGGGGGTGATTTGTTTTTGGTGTCAAGTTTGAATGAAGATTTGATTGCTGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTGATCCAAAATATGGCTATCCTTACCCACCTCCTCAAGGAGGTTATTATCAAGGGCCGCCCGTGATGGCGCCACCGCAATACGCGGTGCCACCACCGAAAAGGCA
GCCAGGCTTCTTGGAGGGATGGTATGCCAAAGCAACTCTCGGTCTCGGTTTCGGTTTCGATTTTGGTTTTGTTTTGACAGAGGTTGGGTTTTGTTTGGTTGTTGTTGTTG
CAGCCTTGCTGCTCTGTGCTGCTGCTGTCTCCTTGATGAGTGCTGCTGTGACCCTTCCATCATATTTCTTGCTTGATGTCAATCAAAGCTTTGCCCATTCTGATTCAAAG
GCTTCTCGTTTCTTTGGGGGTGATTTGTTTTTGGTGTCAAGTTTGAATGAAGATTTGATTGCTGTGTAG
Protein sequenceShow/hide protein sequence
MSDPKYGYPYPPPQGGYYQGPPVMAPPQYAVPPPKRQPGFLEGWYAKATLGLGFGFDFGFVLTEVGFCLVVVVAALLLCAAAVSLMSAAVTLPSYFLLDVNQSFAHSDSK
ASRFFGGDLFLVSSLNEDLIAV