; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS025073 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025073
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMADS-box protein JOINTLESS-like isoform X2
Genome locationscaffold404:514135..515583
RNA-Seq ExpressionMS025073
SyntenyMS025073
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002487 - Transcription factor, K-box


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136891.2 MADS-box protein SVP isoform X1 [Cucumis sativus]8.8e-3090.12Show/hide
Query:  MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMM
        +Q +LERHNSVHSENLPNLNEPSVELQLESN+RAKLNEEVEKK+HELRQMKGEELQGLGMEELKKLEKSLQGGL+RV+E+M
Subjt:  MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMM

XP_008455141.1 PREDICTED: MADS-box protein JOINTLESS-like isoform X2 [Cucumis melo]4.4e-2987.65Show/hide
Query:  MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMM
        +Q +LERHN+VHS+NLPNLNEPSVELQLESN+RAKLNEEVEKK+HELRQMKGEELQGLGMEELKKLEKSLQGGL+RV+E+M
Subjt:  MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMM

XP_022141961.1 MADS-box protein JOINTLESS-like isoform X1 [Momordica charantia]1.0e-33100Show/hide
Query:  MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMM
        MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMM
Subjt:  MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMM

XP_022141962.1 MADS-box protein JOINTLESS-like isoform X2 [Momordica charantia]1.0e-33100Show/hide
Query:  MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMM
        MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMM
Subjt:  MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMM

XP_031744925.1 MADS-box protein SVP isoform X2 [Cucumis sativus]8.8e-3090.12Show/hide
Query:  MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMM
        +Q +LERHNSVHSENLPNLNEPSVELQLESN+RAKLNEEVEKK+HELRQMKGEELQGLGMEELKKLEKSLQGGL+RV+E+M
Subjt:  MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMM

TrEMBL top hitse value%identityAlignment
A0A1S3BZT6 MADS-box protein JOINTLESS-like isoform X22.1e-2987.65Show/hide
Query:  MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMM
        +Q +LERHN+VHS+NLPNLNEPSVELQLESN+RAKLNEEVEKK+HELRQMKGEELQGLGMEELKKLEKSLQGGL+RV+E+M
Subjt:  MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMM

A0A1S3C1G2 MADS-box protein SVP-like isoform X12.1e-2987.65Show/hide
Query:  MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMM
        +Q +LERHN+VHS+NLPNLNEPSVELQLESN+RAKLNEEVEKK+HELRQMKGEELQGLGMEELKKLEKSLQGGL+RV+E+M
Subjt:  MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMM

A0A6J1CKS2 MADS-box protein JOINTLESS-like isoform X14.9e-34100Show/hide
Query:  MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMM
        MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMM
Subjt:  MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMM

A0A6J1CLA0 MADS-box protein JOINTLESS-like isoform X24.9e-34100Show/hide
Query:  MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMM
        MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMM
Subjt:  MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMM

A0A6J1IA12 MADS-box protein JOINTLESS-like isoform X26.2e-2987.65Show/hide
Query:  MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMM
        +QGLLE+H+SVHSENLPNLNEPSVE QLESN+RAKLNEEVEKK HELRQMKGEELQGLG+EELKKLEKSL GGL+RV+EMM
Subjt:  MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMM

SwissProt top hitse value%identityAlignment
O82794 MADS-box protein AGL246.2e-1047.5Show/hide
Query:  MQGLLERHNSVHSENLPNL-NEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSE
        M+ +L R+ S+H+ N+  L + PS  L+LE+   ++L++EVE KT +LR+++GE+L GL +EEL++LEK L+ GL+RVSE
Subjt:  MQGLLERHNSVHSENLPNL-NEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSE

Q69TG5 MADS-box transcription factor 553.2e-0651.92Show/hide
Query:  LQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRV
        LQLE +  + LNE++ + + +LRQM+GEEL+GL +EEL+++EK+L+ GL RV
Subjt:  LQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRV

Q9FUY6 MADS-box protein JOINTLESS1.2e-1353.75Show/hide
Query:  MQGLLERHNSVHSENLPNLNEPSVELQL-ESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSE
        M+ +LER + +HS+NL  L++PS+ELQL E++  ++L++E+ +K+H LRQM+GEELQGL +EEL++LE+SL+ GL+RV E
Subjt:  MQGLLERHNSVHSENLPNLNEPSVELQL-ESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSE

Q9FVC1 MADS-box protein SVP9.2e-1455Show/hide
Query:  MQGLLERHNSVHSENLPNLNEPSVELQL-ESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSE
        M+ +LERHN + S+NL  L++PS+ELQL E++  A++++E+  K+H LRQM+GEELQGL +EEL++LEK+L+ GL RV E
Subjt:  MQGLLERHNSVHSENLPNLNEPSVELQL-ESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSE

Q9XJ66 MADS-box transcription factor 222.8e-1045.45Show/hide
Query:  MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRV
        M  +++++N+ HS NL    +PS++L LE +  A LNE++ + +  LRQM+GEEL+GL ++EL++LEK+L+ GL+RV
Subjt:  MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRV

Arabidopsis top hitse value%identityAlignment
AT2G22540.1 K-box region and MADS-box transcription factor family protein6.6e-1555Show/hide
Query:  MQGLLERHNSVHSENLPNLNEPSVELQL-ESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSE
        M+ +LERHN + S+NL  L++PS+ELQL E++  A++++E+  K+H LRQM+GEELQGL +EEL++LEK+L+ GL RV E
Subjt:  MQGLLERHNSVHSENLPNLNEPSVELQL-ESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSE

AT2G22540.2 K-box region and MADS-box transcription factor family protein6.6e-1555Show/hide
Query:  MQGLLERHNSVHSENLPNLNEPSVELQL-ESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSE
        M+ +LERHN + S+NL  L++PS+ELQL E++  A++++E+  K+H LRQM+GEELQGL +EEL++LEK+L+ GL RV E
Subjt:  MQGLLERHNSVHSENLPNLNEPSVELQL-ESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSE

AT4G24540.1 AGAMOUS-like 244.4e-1147.5Show/hide
Query:  MQGLLERHNSVHSENLPNL-NEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSE
        M+ +L R+ S+H+ N+  L + PS  L+LE+   ++L++EVE KT +LR+++GE+L GL +EEL++LEK L+ GL+RVSE
Subjt:  MQGLLERHNSVHSENLPNL-NEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGGTCTACTTGAGAGGCATAATAGTGTGCATTCAGAAAATCTTCCCAATTTGAATGAACCATCAGTTGAGTTGCAGCTCGAGAGTAATATGCGAGCCAAGTTGAA
CGAAGAAGTTGAGAAAAAGACCCATGAACTGAGGCAAATGAAGGGAGAGGAGCTTCAAGGACTGGGCATGGAGGAACTCAAGAAATTGGAGAAATCGCTTCAAGGAGGAC
TCAACCGCGTTTCAGAAATGATGGTTAATTATTCTATAACGTACTTTTGGCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGGTCTACTTGAGAGGCATAATAGTGTGCATTCAGAAAATCTTCCCAATTTGAATGAACCATCAGTTGAGTTGCAGCTCGAGAGTAATATGCGAGCCAAGTTGAA
CGAAGAAGTTGAGAAAAAGACCCATGAACTGAGGCAAATGAAGGGAGAGGAGCTTCAAGGACTGGGCATGGAGGAACTCAAGAAATTGGAGAAATCGCTTCAAGGAGGAC
TCAACCGCGTTTCAGAAATGATGGTTAATTATTCTATAACGTACTTTTGGCTGTAA
Protein sequenceShow/hide protein sequence
MQGLLERHNSVHSENLPNLNEPSVELQLESNMRAKLNEEVEKKTHELRQMKGEELQGLGMEELKKLEKSLQGGLNRVSEMMVNYSITYFWL