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MS025082 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025082
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionB-like cyclin
Genome locationscaffold404:1003832..1004068
RNA-Seq ExpressionMS025082
SyntenyMS025082
Gene Ontology termsGO:0000079 - regulation of cyclin-dependent protein serine/threonine kinase activity (biological process)
GO:0044772 - mitotic cell cycle phase transition (biological process)
GO:0051301 - cell division (biological process)
GO:0000307 - cyclin-dependent protein kinase holoenzyme complex (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016538 - cyclin-dependent protein serine/threonine kinase regulator activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149248.1 cyclin-D2-1-like [Momordica charantia]9.6e-2578.21Show/hide
Query:  MVKSCHQQMEEFVIDTCPATLRKQRSGEPEQPVPPSPFGVHDVAACSSCDNTGSMSPESVAESPTKLLRSSAPNVQEQ
        MV+SCHQ MEE+VIDTCPA LRKQRSGE EQP PPSP GV D AAC SCDNTGS S E+ AE PTK LRSSAP+VQEQ
Subjt:  MVKSCHQQMEEFVIDTCPATLRKQRSGEPEQPVPPSPFGVHDVAACSSCDNTGSMSPESVAESPTKLLRSSAPNVQEQ

XP_022991967.1 cyclin-D2-2-like [Cucurbita maxima]1.9e-1765.88Show/hide
Query:  MVKSCHQQMEEFVIDTCPATLRKQRSGEPEQPVPPSPFGVHDVAACSSC----DNTGSMSPESV---AESPTKLLRSSAPNVQEQ
        MV+SCHQ MEE+VIDTCP  LRKQR+ E EQP PPSP GV D AAC SC    DN GS S E     AE  TK LRSSAP+VQEQ
Subjt:  MVKSCHQQMEEFVIDTCPATLRKQRSGEPEQPVPPSPFGVHDVAACSSC----DNTGSMSPESV---AESPTKLLRSSAPNVQEQ

XP_023524811.1 cyclin-D2-2-like isoform X1 [Cucurbita pepo subsp. pepo]1.9e-1765.88Show/hide
Query:  MVKSCHQQMEEFVIDTCPATLRKQRSGEPEQPVPPSPFGVHDVAACSSC----DNTGSMSPESV---AESPTKLLRSSAPNVQEQ
        MV+SCHQ MEE+VIDTCP  LRKQR+ E EQP PPSP GV D AAC SC    DN GS S E     AE  TK LRSSAP+VQEQ
Subjt:  MVKSCHQQMEEFVIDTCPATLRKQRSGEPEQPVPPSPFGVHDVAACSSC----DNTGSMSPESV---AESPTKLLRSSAPNVQEQ

XP_023524819.1 cyclin-D4-1-like isoform X2 [Cucurbita pepo subsp. pepo]1.9e-1765.88Show/hide
Query:  MVKSCHQQMEEFVIDTCPATLRKQRSGEPEQPVPPSPFGVHDVAACSSC----DNTGSMSPESV---AESPTKLLRSSAPNVQEQ
        MV+SCHQ MEE+VIDTCP  LRKQR+ E EQP PPSP GV D AAC SC    DN GS S E     AE  TK LRSSAP+VQEQ
Subjt:  MVKSCHQQMEEFVIDTCPATLRKQRSGEPEQPVPPSPFGVHDVAACSSC----DNTGSMSPESV---AESPTKLLRSSAPNVQEQ

XP_038903710.1 cyclin-D2-2-like [Benincasa hispida]5.4e-2068.29Show/hide
Query:  MVKSCHQQMEEFVIDTCPATLRKQRSGEPEQPVPPSPFGVHDVAACSSC----DNTGSMSPESVAESPTKLLRSSAPNVQEQ
        MV+SCHQ MEE+VIDTCPA LRKQR+G  +QP PPSP GV D AAC SC    DN GS S E+  E PTK LRSSAP+VQEQ
Subjt:  MVKSCHQQMEEFVIDTCPATLRKQRSGEPEQPVPPSPFGVHDVAACSSC----DNTGSMSPESVAESPTKLLRSSAPNVQEQ

TrEMBL top hitse value%identityAlignment
A0A5A7TLD3 B-like cyclin8.8e-1664.63Show/hide
Query:  VKSCHQQMEEFVIDTCPATLRKQRSGEPEQPVPPSPFGVHDVAACSSC----DNTGSMSPESVAE-SPTKLLRSSAPNVQEQ
        VKSCHQ MEE+VIDTC A LRKQR    EQP PPSP GV D AAC SC    D+ GS S E  AE SP+K +RSSAP+VQ Q
Subjt:  VKSCHQQMEEFVIDTCPATLRKQRSGEPEQPVPPSPFGVHDVAACSSC----DNTGSMSPESVAE-SPTKLLRSSAPNVQEQ

A0A5D3E1I4 B-like cyclin8.8e-1664.63Show/hide
Query:  VKSCHQQMEEFVIDTCPATLRKQRSGEPEQPVPPSPFGVHDVAACSSC----DNTGSMSPESVAE-SPTKLLRSSAPNVQEQ
        VKSCHQ MEE+VIDTC A LRKQR    EQP PPSP GV D AAC SC    D+ GS S E  AE SP+K +RSSAP+VQ Q
Subjt:  VKSCHQQMEEFVIDTCPATLRKQRSGEPEQPVPPSPFGVHDVAACSSC----DNTGSMSPESVAE-SPTKLLRSSAPNVQEQ

A0A6J1D6B2 B-like cyclin4.6e-2578.21Show/hide
Query:  MVKSCHQQMEEFVIDTCPATLRKQRSGEPEQPVPPSPFGVHDVAACSSCDNTGSMSPESVAESPTKLLRSSAPNVQEQ
        MV+SCHQ MEE+VIDTCPA LRKQRSGE EQP PPSP GV D AAC SCDNTGS S E+ AE PTK LRSSAP+VQEQ
Subjt:  MVKSCHQQMEEFVIDTCPATLRKQRSGEPEQPVPPSPFGVHDVAACSSCDNTGSMSPESVAESPTKLLRSSAPNVQEQ

A0A6J1FQ05 B-like cyclin3.0e-1663.86Show/hide
Query:  MVKSCHQQMEEFVIDTCPATLRKQRSGEPEQPVPPSPFGVHDVAACSSC----DNTGSMSPESV---AESPTKLLRSSAPNVQ
        MV+SCHQ MEE+VIDTCP  LRKQR+ E EQP PPSP GV D AAC SC    DN GS S E     AE  TK LRSSAP+V+
Subjt:  MVKSCHQQMEEFVIDTCPATLRKQRSGEPEQPVPPSPFGVHDVAACSSC----DNTGSMSPESV---AESPTKLLRSSAPNVQ

A0A6J1JNE1 B-like cyclin9.4e-1865.88Show/hide
Query:  MVKSCHQQMEEFVIDTCPATLRKQRSGEPEQPVPPSPFGVHDVAACSSC----DNTGSMSPESV---AESPTKLLRSSAPNVQEQ
        MV+SCHQ MEE+VIDTCP  LRKQR+ E EQP PPSP GV D AAC SC    DN GS S E     AE  TK LRSSAP+VQEQ
Subjt:  MVKSCHQQMEEFVIDTCPATLRKQRSGEPEQPVPPSPFGVHDVAACSSC----DNTGSMSPESV---AESPTKLLRSSAPNVQEQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAAAGCTGTCACCAACAAATGGAGGAGTTTGTGATCGACACGTGTCCGGCAACGCTCCGAAAACAGCGGAGTGGTGAACCCGAGCAGCCGGTGCCTCCGAGTCC
ATTCGGCGTGCACGATGTGGCTGCATGCAGTAGCTGTGACAACACCGGCTCTATGAGCCCCGAATCCGTCGCCGAGTCTCCGACTAAGCTGCTGCGATCCTCGGCGCCGA
ATGTACAGGAGCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAAAGCTGTCACCAACAAATGGAGGAGTTTGTGATCGACACGTGTCCGGCAACGCTCCGAAAACAGCGGAGTGGTGAACCCGAGCAGCCGGTGCCTCCGAGTCC
ATTCGGCGTGCACGATGTGGCTGCATGCAGTAGCTGTGACAACACCGGCTCTATGAGCCCCGAATCCGTCGCCGAGTCTCCGACTAAGCTGCTGCGATCCTCGGCGCCGA
ATGTACAGGAGCAGTAG
Protein sequenceShow/hide protein sequence
MVKSCHQQMEEFVIDTCPATLRKQRSGEPEQPVPPSPFGVHDVAACSSCDNTGSMSPESVAESPTKLLRSSAPNVQEQ