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MS025106 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025106
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionmitochondrial import inner membrane translocase subunit PAM16 like 2-like isoform X2
Genome locationscaffold191:156724..157224
RNA-Seq ExpressionMS025106
SyntenyMS025106
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010243719.1 PREDICTED: uncharacterized protein LOC104587707 [Nelumbo nucifera]2.7e-0439.39Show/hide
Query:  ILAVELPKRFKGPRIDKYDRSVDPVDQATSYHDAMCQARYSDVEKSRGFSRTLVGSARQCFQNLPP
        I+   LP  FK P +++YD++ DP D   S+   M    YSD    R F  T  G+AR+ F +LPP
Subjt:  ILAVELPKRFKGPRIDKYDRSVDPVDQATSYHDAMCQARYSDVEKSRGFSRTLVGSARQCFQNLPP

XP_022157396.1 mitochondrial import inner membrane translocase subunit Tim16-like isoform X1 [Momordica charantia]2.5e-0557.45Show/hide
Query:  SILAVELPKRFKGPRIDKYDRSVDPVDQATSYHDAMCQARYSDVEKS
        ++L ++L K FKGPRIDKYD S DPVD ATSYHDAM  +  + ++K+
Subjt:  SILAVELPKRFKGPRIDKYDRSVDPVDQATSYHDAMCQARYSDVEKS

XP_022157397.1 mitochondrial import inner membrane translocase subunit PAM16 like 2-like isoform X2 [Momordica charantia]2.5e-0557.45Show/hide
Query:  SILAVELPKRFKGPRIDKYDRSVDPVDQATSYHDAMCQARYSDVEKS
        ++L ++L K FKGPRIDKYD S DPVD ATSYHDAM  +  + ++K+
Subjt:  SILAVELPKRFKGPRIDKYDRSVDPVDQATSYHDAMCQARYSDVEKS

XP_042380277.1 uncharacterized protein LOC121972697 [Zingiber officinale]7.1e-0537.35Show/hide
Query:  VKEEIFNRVRAELGAGASILAVELPKRFKGPRIDKYDRSVDPVDQATSYHDAMCQARYSDVEKSRGFSRTLVGSARQCFQNLP
        +KEE    +  ++     +L   LPK +K P I +YD S DP D    + +A    +YSDV K R F  TL GS ++ F  LP
Subjt:  VKEEIFNRVRAELGAGASILAVELPKRFKGPRIDKYDRSVDPVDQATSYHDAMCQARYSDVEKSRGFSRTLVGSARQCFQNLP

XP_042423661.1 uncharacterized protein LOC122011344 [Zingiber officinale]3.5e-0443.08Show/hide
Query:  ILAVELPKRFKGPRIDKYDRSVDPVDQATSYHDAMCQARYSDVEKSRGFSRTLVGSARQCFQNLP
        IL   LPK ++ P I +YDRS DP +    + +A    +YSD  K R F  TL GSA + F  LP
Subjt:  ILAVELPKRFKGPRIDKYDRSVDPVDQATSYHDAMCQARYSDVEKSRGFSRTLVGSARQCFQNLP

TrEMBL top hitse value%identityAlignment
A0A1U7YZR5 uncharacterized protein LOC1045877071.3e-0439.39Show/hide
Query:  ILAVELPKRFKGPRIDKYDRSVDPVDQATSYHDAMCQARYSDVEKSRGFSRTLVGSARQCFQNLPP
        I+   LP  FK P +++YD++ DP D   S+   M    YSD    R F  T  G+AR+ F +LPP
Subjt:  ILAVELPKRFKGPRIDKYDRSVDPVDQATSYHDAMCQARYSDVEKSRGFSRTLVGSARQCFQNLPP

A0A1U7ZSN9 uncharacterized protein LOC1045969402.9e-0438.36Show/hide
Query:  ILAVELPKRFKGPRIDKYDRSVDPVDQATSYHDAMCQARYSDVEKSRGFSRTLVGSARQCFQNLPPTLGWKLS
        I++  LP  FK P ++ YD+S +P DQ   +   M   RY D    R F  T  G+ R  F NLPP   W +S
Subjt:  ILAVELPKRFKGPRIDKYDRSVDPVDQATSYHDAMCQARYSDVEKSRGFSRTLVGSARQCFQNLPPTLGWKLS

A0A444ER56 Retrotrans_gag domain-containing protein2.2e-0431.69Show/hide
Query:  STPDPRKTLKQGPLDVSTTPDSNVDSLTNTKTSTRPSGFQFGIGMEDLDRVKEEIFNRVRAELGAGA--------SILAVELPKRFKGPRIDKYDRSVDP
        STP P ++  +    + T PD +  S T+T  S R    Q     + LD V++E+  + R E+G  +         I A  +P  F+ P ++ YD S DP
Subjt:  STPDPRKTLKQGPLDVSTTPDSNVDSLTNTKTSTRPSGFQFGIGMEDLDRVKEEIFNRVRAELGAGA--------SILAVELPKRFKGPRIDKYDRSVDP

Query:  VDQATSYHDAMCQARYSDVEKSRGFSRTLVGSARQCFQNLPP
        ++  T++H  M     SD    R F  TL GSAR  +  L P
Subjt:  VDQATSYHDAMCQARYSDVEKSRGFSRTLVGSARQCFQNLPP

A0A6J1DUD6 mitochondrial import inner membrane translocase subunit PAM16 like 2-like isoform X21.2e-0557.45Show/hide
Query:  SILAVELPKRFKGPRIDKYDRSVDPVDQATSYHDAMCQARYSDVEKS
        ++L ++L K FKGPRIDKYD S DPVD ATSYHDAM  +  + ++K+
Subjt:  SILAVELPKRFKGPRIDKYDRSVDPVDQATSYHDAMCQARYSDVEKS

A0A6J1DXY4 mitochondrial import inner membrane translocase subunit Tim16-like isoform X11.2e-0557.45Show/hide
Query:  SILAVELPKRFKGPRIDKYDRSVDPVDQATSYHDAMCQARYSDVEKS
        ++L ++L K FKGPRIDKYD S DPVD ATSYHDAM  +  + ++K+
Subjt:  SILAVELPKRFKGPRIDKYDRSVDPVDQATSYHDAMCQARYSDVEKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTTTCGACTCCCGACCCGAGGAAGACTCTTAAACAAGGACCCCTTGACGTCTCTACGACTCCCGACTCCAACGTAGATTCCCTGACTAACACCAAGACATCGAC
CAGGCCAAGTGGGTTTCAATTTGGGATCGGTATGGAAGACTTAGACCGTGTCAAGGAGGAAATCTTCAACCGAGTAAGAGCAGAACTTGGAGCCGGAGCCAGCATCCTAG
CCGTGGAGCTACCGAAGAGGTTTAAGGGCCCTCGCATCGATAAATATGATAGGTCAGTGGACCCCGTAGACCAGGCTACGTCCTACCACGACGCAATGTGCCAGGCAAGG
TACAGCGACGTCGAAAAGTCTCGTGGCTTCTCCAGAACCCTCGTCGGATCTGCTCGGCAATGTTTCCAGAACCTCCCCCCAACACTCGGTTGGAAGCTATCAGGACCTAG
CTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGTTTCGACTCCCGACCCGAGGAAGACTCTTAAACAAGGACCCCTTGACGTCTCTACGACTCCCGACTCCAACGTAGATTCCCTGACTAACACCAAGACATCGAC
CAGGCCAAGTGGGTTTCAATTTGGGATCGGTATGGAAGACTTAGACCGTGTCAAGGAGGAAATCTTCAACCGAGTAAGAGCAGAACTTGGAGCCGGAGCCAGCATCCTAG
CCGTGGAGCTACCGAAGAGGTTTAAGGGCCCTCGCATCGATAAATATGATAGGTCAGTGGACCCCGTAGACCAGGCTACGTCCTACCACGACGCAATGTGCCAGGCAAGG
TACAGCGACGTCGAAAAGTCTCGTGGCTTCTCCAGAACCCTCGTCGGATCTGCTCGGCAATGTTTCCAGAACCTCCCCCCAACACTCGGTTGGAAGCTATCAGGACCTAG
CTAG
Protein sequenceShow/hide protein sequence
MGVSTPDPRKTLKQGPLDVSTTPDSNVDSLTNTKTSTRPSGFQFGIGMEDLDRVKEEIFNRVRAELGAGASILAVELPKRFKGPRIDKYDRSVDPVDQATSYHDAMCQAR
YSDVEKSRGFSRTLVGSARQCFQNLPPTLGWKLSGPS