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MS025172 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025172
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold871:228283..228891
RNA-Seq ExpressionMS025172
SyntenyMS025172
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149381.1 uncharacterized protein LOC111017811 [Momordica charantia]2.3e-0653.68Show/hide
Query:  SLSSLGGGLYSSGNFV-FELFMLRLGSLGVGG-IFFLSGIFYGLCFSLLLEMVSVVLCGMTLGFRGAYLSKVFGGRVDVPIWIPALSGLLSVSSA
        SL  L  G Y+    V   +  L +G L VGG IFFLS + + L F L LEMVSVVL GMTLGF  + LSK +  R DV +WIP  SGL SVSSA
Subjt:  SLSSLGGGLYSSGNFV-FELFMLRLGSLGVGG-IFFLSGIFYGLCFSLLLEMVSVVLCGMTLGFRGAYLSKVFGGRVDVPIWIPALSGLLSVSSA
TrEMBL top hitse value%identityAlignment
A0A6J1D875 uncharacterized protein LOC1110178111.1e-0653.68Show/hide
Query:  SLSSLGGGLYSSGNFV-FELFMLRLGSLGVGG-IFFLSGIFYGLCFSLLLEMVSVVLCGMTLGFRGAYLSKVFGGRVDVPIWIPALSGLLSVSSA
        SL  L  G Y+    V   +  L +G L VGG IFFLS + + L F L LEMVSVVL GMTLGF  + LSK +  R DV +WIP  SGL SVSSA
Subjt:  SLSSLGGGLYSSGNFV-FELFMLRLGSLGVGG-IFFLSGIFYGLCFSLLLEMVSVVLCGMTLGFRGAYLSKVFGGRVDVPIWIPALSGLLSVSSA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTTGAGCAGATTCTGTACTTTTTCTTGTAGAAGGGGTGCGAGAGCGGGCGGTCAAGGGCTAAGGTGGCTTAGTTTGAGTAGCTTGGGTGGAGGCTTATATTCTTC
GGGAAATTTTGTATTTGAACTGTTCATGCTTCGTCTCGGTTCTCTTGGTGTTGGCGGGATATTCTTTCTGTCTGGGATATTTTACGGCCTCTGTTTCAGTTTGCTATTGG
AGATGGTCAGCGTTGTTTTGTGTGGCATGACGCTTGGCTTCCGAGGAGCCTATTTATCCAAGGTTTTCGGTGGGAGGGTTGATGTGCCCATTTGGATTCCGGCGTTGTCG
GGTCTCTTATCGGTGTCGAGTGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGTTGAGCAGATTCTGTACTTTTTCTTGTAGAAGGGGTGCGAGAGCGGGCGGTCAAGGGCTAAGGTGGCTTAGTTTGAGTAGCTTGGGTGGAGGCTTATATTCTTC
GGGAAATTTTGTATTTGAACTGTTCATGCTTCGTCTCGGTTCTCTTGGTGTTGGCGGGATATTCTTTCTGTCTGGGATATTTTACGGCCTCTGTTTCAGTTTGCTATTGG
AGATGGTCAGCGTTGTTTTGTGTGGCATGACGCTTGGCTTCCGAGGAGCCTATTTATCCAAGGTTTTCGGTGGGAGGGTTGATGTGCCCATTTGGATTCCGGCGTTGTCG
GGTCTCTTATCGGTGTCGAGTGCGTAG
Protein sequenceShow/hide protein sequence
MMLSRFCTFSCRRGARAGGQGLRWLSLSSLGGGLYSSGNFVFELFMLRLGSLGVGGIFFLSGIFYGLCFSLLLEMVSVVLCGMTLGFRGAYLSKVFGGRVDVPIWIPALS
GLLSVSSA