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MS025253 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025253
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionElongator complex protein 3
Genome locationscaffold693:131620..131871
RNA-Seq ExpressionMS025253
SyntenyMS025253
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044237 - cellular metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0000166 - nucleotide binding (molecular function)
GO:0003723 - RNA binding (molecular function)
GO:0016746 - transferase activity, transferring acyl groups (molecular function)
GO:0043167 - ion binding (molecular function)
GO:0051536 - iron-sulfur cluster binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EHH61869.1 hypothetical protein EGM_20012, partial [Macaca fascicularis]9.3e-1041.18Show/hide
Query:  MCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSDSENGVRESEIRVHESKIGGCDSEISV--SEIGV
        M E+E+G+ E++IGM E+E+G+ E++IGM E+E  + E+++GM E+E+G  ++E G+RE+E+ + E+K+G   +E+ +  +E+GV
Subjt:  MCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSDSENGVRESEIRVHESKIGGCDSEISV--SEIGV

KAF2366589.1 hypothetical protein FHG87_002656 [Trinorchestia longiramus]7.9e-0945.68Show/hide
Query:  ESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSDSENGVRESEIRVHESKIGGCDSEISVSEIGV
        E ++G+SE K+G+ E + GVSE K+ + E E+GVSE K+G+ E ++GVS+ E GV E ++ V E K+G  + E+ VSE+ V
Subjt:  ESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSDSENGVRESEIRVHESKIGGCDSEISVSEIGV

KAG0718199.1 putative G-protein coupled receptor [Chionoecetes opilio]2.3e-0853.33Show/hide
Query:  IGVSESKIGMCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSDSENGVRESEIRVHESKIGGCDSEISVSE
        I VSES + + ES +GVSES IG+ ES +GVSES IG+ ES +G S+S  GV ES + V ES +G  +S + VSE
Subjt:  IGVSESKIGMCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSDSENGVRESEIRVHESKIGGCDSEISVSE

RMC17042.1 hypothetical protein DUI87_05615 [Hirundo rustica rustica]1.6e-0946.15Show/hide
Query:  ESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSDSENGVRESEIRVHESKIGGCDSEISVSE
        ES++G SESK+G+ ES++G+SESK+G+ ES++G+SESK+G   S+ G+S+S+   RES++   +SK+G   S++  +E
Subjt:  ESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSDSENGVRESEIRVHESKIGGCDSEISVSE

WP_130003055.1 hypothetical protein [Sporolactobacillus sp. THM7-7]2.4e-1044.44Show/hide
Query:  MCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSESK-------IGMCESEIGVSDSENGVRESEIRVHESKIGGCDSEISVSEIGV
        M ESE+G+ ES++ M ES + + ESK+GM ESE+G+ ES+       +GM ESE+ +++SE G+ ESE+R+ ES++G  +SE+ ++E G+
Subjt:  MCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSESK-------IGMCESEIGVSDSENGVRESEIRVHESKIGGCDSEISVSEIGV

TrEMBL top hitse value%identityAlignment
A0A2B4R6C4 Putative helicase (Fragment)9.4e-0839.02Show/hide
Query:  ESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSDSENGVRESEIRVHESKIGGCDSEISV--SEIG
        +SE+G  +S++G  +SE+G  +S++G  +SE+G  +S++G  +SE+G  DSE G ++SE+   +S++G  DSE+    SE+G
Subjt:  ESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSDSENGVRESEIRVHESKIGGCDSEISV--SEIG

A0A3M0KUR6 Elongator complex protein 37.7e-1046.15Show/hide
Query:  ESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSDSENGVRESEIRVHESKIGGCDSEISVSE
        ES++G SESK+G+ ES++G+SESK+G+ ES++G+SESK+G   S+ G+S+S+   RES++   +SK+G   S++  +E
Subjt:  ESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSDSENGVRESEIRVHESKIGGCDSEISVSE

A0A401NNT7 Uncharacterized protein9.4e-0845.68Show/hide
Query:  ESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSDSENGVRESEIRVHESKIGGCDSEISVSEIGV
        ESE+G  ES++G  +SE+ V E+++G  ESE+GV ES++G+ ESE+G  +SE G  ESE+   ES++G  +SE+   E G+
Subjt:  ESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSDSENGVRESEIRVHESKIGGCDSEISVSEIGV

A0A4Q4J977 Uncharacterized protein1.2e-1044.44Show/hide
Query:  MCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSESK-------IGMCESEIGVSDSENGVRESEIRVHESKIGGCDSEISVSEIGV
        M ESE+G+ ES++ M ES + + ESK+GM ESE+G+ ES+       +GM ESE+ +++SE G+ ESE+R+ ES++G  +SE+ ++E G+
Subjt:  MCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSESK-------IGMCESEIGVSDSENGVRESEIRVHESKIGGCDSEISVSEIGV

G8F3K5 Uncharacterized protein (Fragment)4.5e-1041.18Show/hide
Query:  MCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSDSENGVRESEIRVHESKIGGCDSEISV--SEIGV
        M E+E+G+ E++IGM E+E+G+ E++IGM E+E  + E+++GM E+E+G  ++E G+RE+E+ + E+K+G   +E+ +  +E+GV
Subjt:  MCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSDSENGVRESEIRVHESKIGGCDSEISV--SEIGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGAGAGTGAGATTGGTGTGAGCGAGAGTAAGATTGGTATGTGTGAGAGTGAGATTGGTGTGAGCGAGAGTAAGATTGGTATGTGTGAGAGTGAGATTGGTGTGAG
CGAGAGTAAGATTGGTATGTGTGAGAGTGAGATTGGTGTGAGCGATAGCGAGAATGGTGTGAGAGAGAGCGAGATCCGTGTGCACGAGAGCAAGATTGGTGGGTGCGATA
GTGAGATTAGTGTGAGTGAAATTGGTGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGAGAGTGAGATTGGTGTGAGCGAGAGTAAGATTGGTATGTGTGAGAGTGAGATTGGTGTGAGCGAGAGTAAGATTGGTATGTGTGAGAGTGAGATTGGTGTGAG
CGAGAGTAAGATTGGTATGTGTGAGAGTGAGATTGGTGTGAGCGATAGCGAGAATGGTGTGAGAGAGAGCGAGATCCGTGTGCACGAGAGCAAGATTGGTGGGTGCGATA
GTGAGATTAGTGTGAGTGAAATTGGTGTGTGA
Protein sequenceShow/hide protein sequence
MCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSESKIGMCESEIGVSDSENGVRESEIRVHESKIGGCDSEISVSEIGV