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MS025288 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025288
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCytochrome c oxidase subunit 2
Genome locationscaffold85:31857..35163
RNA-Seq ExpressionMS025288
SyntenyMS025288
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:1902600 - proton transmembrane transport (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0070469 - respirasome (cellular component)
GO:0004129 - cytochrome-c oxidase activity (molecular function)
GO:0005507 - copper ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFS28308.1 hypothetical protein Acr_00g0001090 [Actinidia rufa]5.8e-3283.52Show/hide
Query:  MISCRG----KKKRAVSAEGEGPATAETTDPLLVPSRLLRVREARNPKYEGSPKIEKGGQGFRKGLPPLPGQDRWEGALSWKSHNQPLYLC
        MISCR     KKKRAVSAEGEGPATAETT+PLLVPS LLRVREA NP+YEGS KIEKGGQ FRK L PLPGQDRWEGALS K HNQPLYLC
Subjt:  MISCRG----KKKRAVSAEGEGPATAETTDPLLVPSRLLRVREARNPKYEGSPKIEKGGQGFRKGLPPLPGQDRWEGALSWKSHNQPLYLC

GFS28381.1 hypothetical protein Acr_00g0001450 [Actinidia rufa]1.7e-5285.38Show/hide
Query:  GWERSCEGGQSKIVLLLYKDNRRSQRLGATLFLSYSSFFMISCRG----KKKRAVSAEGEGPATAETTDPLLVPSRLLRVREARNPKYEGSPKIEKGGQG
        G  +SCEGGQSKIVL LYKDNRRSQRLGATLFLSYSSFFMISCR     KKKRAVSAEGEGPATAETT+PLLVPS LLRVREA NP+YEGS KIEKGGQ 
Subjt:  GWERSCEGGQSKIVLLLYKDNRRSQRLGATLFLSYSSFFMISCRG----KKKRAVSAEGEGPATAETTDPLLVPSRLLRVREARNPKYEGSPKIEKGGQG

Query:  FRKGLPPLPGQDRWEGALSWKSHNQPLYLC
        FRK L PLPGQDRWEGALS K HNQPLYLC
Subjt:  FRKGLPPLPGQDRWEGALSWKSHNQPLYLC

KAB9173090.1 hypothetical protein FH972_026993 [Carpinus fangiana]2.1e-3474.11Show/hide
Query:  RSCEGGQSKIVLLLYKDNRRSQRLGATLFLSYSSFFMISCRGKKKRAVSAEGEGPATAETTDPLLVPSRLLRVREARNPKYEGSPKIEKGGQGFRKGLPP
        +SCEGGQSKIVL LYKDNRRSQRLGATLFL                      EGPATAET DP+LVPSRLLRVREA NPKYEGS KIEKGGQGFRKGL P
Subjt:  RSCEGGQSKIVLLLYKDNRRSQRLGATLFLSYSSFFMISCRGKKKRAVSAEGEGPATAETTDPLLVPSRLLRVREARNPKYEGSPKIEKGGQGFRKGLPP

Query:  LPGQDRWEGALS
        LPGQDRWEGALS
Subjt:  LPGQDRWEGALS

KAF3957589.1 hypothetical protein CMV_017407 [Castanea mollissima]1.8e-4184.91Show/hide
Query:  MISCRG-----KKKRAVSAEGEGPATAETTDPLLVPSRLLRVREARNPKYEGSPKIEKGGQGFRKGLPPLPGQDRWEGALSWKSHNQPLYLCTYTFVSRW
        MISCRG     KKKRAVSAEGEGPATAET DP+LVP RLLRVREA NPKYEGS KIEKGGQGFRKGL PLPGQDRWEGALS K HNQPLYL TYTF+S W
Subjt:  MISCRG-----KKKRAVSAEGEGPATAETTDPLLVPSRLLRVREARNPKYEGSPKIEKGGQGFRKGLPPLPGQDRWEGALSWKSHNQPLYLCTYTFVSRW

Query:  GRPSSC
        GRPSSC
Subjt:  GRPSSC

XP_033128659.1 uncharacterized mitochondrial protein AtMg01280-like [Brassica rapa]4.4e-3286.52Show/hide
Query:  RSCEGGQSKIVLLLYKDNRRSQRLGATLFLSYSSFFMISCRGK--KKRAVSAEGEGPATAETTDPLLVPSRLLRVREARNPKYEGSPKI
        +SCEGGQSKIVL LYKDNRRSQRLGATLFLSYSSFFMISCRG+  KK+AVSAEGEGPATAETTDPLLV SRLLRVREA N KYEGS ++
Subjt:  RSCEGGQSKIVLLLYKDNRRSQRLGATLFLSYSSFFMISCRGK--KKRAVSAEGEGPATAETTDPLLVPSRLLRVREARNPKYEGSPKI

TrEMBL top hitse value%identityAlignment
A0A2N9G5D7 Uncharacterized protein6.2e-3288.75Show/hide
Query:  KKRAVSAEGEGPATAETTDPLLVPSRLLRVREARNPKYEGSPKIEKGGQGFRKGLPPLPGQDRWEGALSWKSHNQPLYLC
        +K AVSAEGEGPATAET DP+LVPSRLLRVREA NPKYEGS KIEKGGQGFRKGL PLPGQDRWEGALS K HNQPLYLC
Subjt:  KKRAVSAEGEGPATAETTDPLLVPSRLLRVREARNPKYEGSPKIEKGGQGFRKGLPPLPGQDRWEGALSWKSHNQPLYLC

A0A5N6L5W4 Cytochrome c oxidase subunit 21.0e-3474.11Show/hide
Query:  RSCEGGQSKIVLLLYKDNRRSQRLGATLFLSYSSFFMISCRGKKKRAVSAEGEGPATAETTDPLLVPSRLLRVREARNPKYEGSPKIEKGGQGFRKGLPP
        +SCEGGQSKIVL LYKDNRRSQRLGATLFL                      EGPATAET DP+LVPSRLLRVREA NPKYEGS KIEKGGQGFRKGL P
Subjt:  RSCEGGQSKIVLLLYKDNRRSQRLGATLFLSYSSFFMISCRGKKKRAVSAEGEGPATAETTDPLLVPSRLLRVREARNPKYEGSPKIEKGGQGFRKGLPP

Query:  LPGQDRWEGALS
        LPGQDRWEGALS
Subjt:  LPGQDRWEGALS

A0A6S7KVC5 COX2_CUA domain-containing protein2.4e-2861.67Show/hide
Query:  RSCEGGQSKIVLLLYKDNRRSQRLGATLFLSYSSFFMISCRGKKKRAVSAEGEGPATAETTDPLLVPSRLLRV--------REARNPKYEGSPKIEKGGQ
        RSCEGGQSKIVL LYKDNRRSQRLGATLFLSYSSFFMISCRG++ +    +  GP+  +  D  L   RLL +           + P+ +   +IEKGGQ
Subjt:  RSCEGGQSKIVLLLYKDNRRSQRLGATLFLSYSSFFMISCRGKKKRAVSAEGEGPATAETTDPLLVPSRLLRV--------REARNPKYEGSPKIEKGGQ

Query:  GFRKGLPPLPGQDRWEGALS
        GFRK LPPLPGQDRWEGALS
Subjt:  GFRKGLPPLPGQDRWEGALS

A0A7J0D6G3 Uncharacterized protein2.8e-3283.52Show/hide
Query:  MISCRG----KKKRAVSAEGEGPATAETTDPLLVPSRLLRVREARNPKYEGSPKIEKGGQGFRKGLPPLPGQDRWEGALSWKSHNQPLYLC
        MISCR     KKKRAVSAEGEGPATAETT+PLLVPS LLRVREA NP+YEGS KIEKGGQ FRK L PLPGQDRWEGALS K HNQPLYLC
Subjt:  MISCRG----KKKRAVSAEGEGPATAETTDPLLVPSRLLRVREARNPKYEGSPKIEKGGQGFRKGLPPLPGQDRWEGALSWKSHNQPLYLC

A0A7J0D8B7 Cytochrome c oxidase subunit 28.3e-5385.38Show/hide
Query:  GWERSCEGGQSKIVLLLYKDNRRSQRLGATLFLSYSSFFMISCRG----KKKRAVSAEGEGPATAETTDPLLVPSRLLRVREARNPKYEGSPKIEKGGQG
        G  +SCEGGQSKIVL LYKDNRRSQRLGATLFLSYSSFFMISCR     KKKRAVSAEGEGPATAETT+PLLVPS LLRVREA NP+YEGS KIEKGGQ 
Subjt:  GWERSCEGGQSKIVLLLYKDNRRSQRLGATLFLSYSSFFMISCRG----KKKRAVSAEGEGPATAETTDPLLVPSRLLRVREARNPKYEGSPKIEKGGQG

Query:  FRKGLPPLPGQDRWEGALSWKSHNQPLYLC
        FRK L PLPGQDRWEGALS K HNQPLYLC
Subjt:  FRKGLPPLPGQDRWEGALSWKSHNQPLYLC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTTGCCGGAGATCGAAGCTGGTAACGAAATGAAGCGATCCAATGCGAACATGAAGGAGGTTGAGAAGACGACGGAAGACGAATTTGTTTGTTTTTTTGGACGTGC
CGCGGTTTTTGGTTGGGAACGGTCATGCGAAGGGGGCCAGTCCAAGATCGTACTGTTGCTCTACAAAGACAACAGACGCTCTCAACGGCTAGGCGCCACTCTCTTTCTGA
GTTATTCCAGCTTCTTCATGATTTCGTGCCGCGGTAAAAAAAAAAGGGCCGTCTCAGCGGAAGGAGAAGGACCTGCAACGGCAGAGACTACTGACCCTCTTCTTGTTCCT
AGCCGTCTGTTACGAGTCCGGGAAGCCAGGAATCCTAAATATGAGGGATCCCCCAAAATAGAGAAGGGTGGGCAGGGCTTCCGCAAGGGCCTCCCCCCTCTTCCCGGTCA
AGATAGATGGGAAGGAGCCCTATCTTGGAAAAGCCATAACCAGCCTCTTTATTTATGTACGTACACCTTTGTTTCAAGGTGGGGCCGCCCTTCCTCCTGCTAATCCGGCC
ATTTCCGAACCTTTCTTTCCCACCCCATTCAATGGAGGACTTCTCAATTCTTGCGATTCCCAGCCCCTNATCCCCACAAATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTTGCCGGAGATCGAAGCTGGTAACGAAATGAAGCGATCCAATGCGAACATGAAGGAGGTTGAGAAGACGACGGAAGACGAATTTGTTTGTTTTTTTGGACGTGC
CGCGGTTTTTGGTTGGGAACGGTCATGCGAAGGGGGCCAGTCCAAGATCGTACTGTTGCTCTACAAAGACAACAGACGCTCTCAACGGCTAGGCGCCACTCTCTTTCTGA
GTTATTCCAGCTTCTTCATGATTTCGTGCCGCGGTAAAAAAAAAAGGGCCGTCTCAGCGGAAGGAGAAGGACCTGCAACGGCAGAGACTACTGACCCTCTTCTTGTTCCT
AGCCGTCTGTTACGAGTCCGGGAAGCCAGGAATCCTAAATATGAGGGATCCCCCAAAATAGAGAAGGGTGGGCAGGGCTTCCGCAAGGGCCTCCCCCCTCTTCCCGGTCA
AGATAGATGGGAAGGAGCCCTATCTTGGAAAAGCCATAACCAGCCTCTTTATTTATGTACGTACACCTTTGTTTCAAGGTGGGGCCGCCCTTCCTCCTGCTAATCCGGCC
ATTTCCGAACCTTTCTTTCCCACCCCATTCAATGGAGGACTTCTCAATTCTTGCGATTCCCAGCCCCTNATCCCCACAAATTGTAA
Protein sequenceShow/hide protein sequence
MSLPEIEAGNEMKRSNANMKEVEKTTEDEFVCFFGRAAVFGWERSCEGGQSKIVLLLYKDNRRSQRLGATLFLSYSSFFMISCRGKKKRAVSAEGEGPATAETTDPLLVP
SRLLRVREARNPKYEGSPKIEKGGQGFRKGLPPLPGQDRWEGALSWKSHNQPLYLCTYTFVSRWGRPSSCUSGHFRTFLSHPIQWRTSQFLRFPAPXPHKL