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MS025301 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025301
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold305:155768..157886
RNA-Seq ExpressionMS025301
SyntenyMS025301
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022153201.1 uncharacterized protein LOC111020757 [Momordica charantia]6.0e-3652.69Show/hide
Query:  SKVKEYLVATNAEAQHMVRIMRPQKARAIPDMPDVPELPAVPELPADVERGTQKRRVKDKGKNIVEDPIEEAQALDDAALDDPALDDAEPSENGGQALQK
        SKVKE+L+AT+A+ QHMVR++ P + R IPD P VP+   VP+ PA  ER      V D   ++   P+E      D  +D  A+D+A PS N G+ L+K
Subjt:  SKVKEYLVATNAEAQHMVRIMRPQKARAIPDMPDVPELPAVPELPADVERGTQKRRVKDKGKNIVEDPIEEAQALDDAALDDPALDDAEPSENGGQALQK

Query:  RLKRNKFKNRISRQLKRLDDCVGAIEATLSGFG---------------GKFSDPSKYFGGGGGPDDDDPSDQRPDEASKLDEGPKS
        RLK+NKFK RISR+LKRLD+CVGAIE  L  FG               GKF D SKYFGGGGGPDDD PSDQRPDE+ K D G KS
Subjt:  RLKRNKFKNRISRQLKRLDDCVGAIEATLSGFG---------------GKFSDPSKYFGGGGGPDDDDPSDQRPDEASKLDEGPKS
XP_022155163.1 uncharacterized protein LOC111022304 [Momordica charantia]1.8e-2461.21Show/hide
Query:  VSKVKEYLVATNAEAQHMVRIMRPQKARAI------PDMPDVPELPAVP------------------ELPADVERGTQKRRVKDKGKNIVEDPIEEAQAL
        +SKVKEYLV+TNAE +HMVRIMRP +ARAI      PD P VP+ PAVP                  +LPAD+ERGTQ+RRVKDKGKNI+EDP+EEA+ L
Subjt:  VSKVKEYLVATNAEAQHMVRIMRPQKARAI------PDMPDVPELPAVP------------------ELPADVERGTQKRRVKDKGKNIVEDPIEEAQAL

Query:  DDAALDDPALDDAEPS
        DD AL  PALDDA PS
Subjt:  DDAALDDPALDDAEPS
TrEMBL top hitse value%identityAlignment
A0A6J1DJX9 uncharacterized protein LOC1110207572.9e-3652.69Show/hide
Query:  SKVKEYLVATNAEAQHMVRIMRPQKARAIPDMPDVPELPAVPELPADVERGTQKRRVKDKGKNIVEDPIEEAQALDDAALDDPALDDAEPSENGGQALQK
        SKVKE+L+AT+A+ QHMVR++ P + R IPD P VP+   VP+ PA  ER      V D   ++   P+E      D  +D  A+D+A PS N G+ L+K
Subjt:  SKVKEYLVATNAEAQHMVRIMRPQKARAIPDMPDVPELPAVPELPADVERGTQKRRVKDKGKNIVEDPIEEAQALDDAALDDPALDDAEPSENGGQALQK

Query:  RLKRNKFKNRISRQLKRLDDCVGAIEATLSGFG---------------GKFSDPSKYFGGGGGPDDDDPSDQRPDEASKLDEGPKS
        RLK+NKFK RISR+LKRLD+CVGAIE  L  FG               GKF D SKYFGGGGGPDDD PSDQRPDE+ K D G KS
Subjt:  RLKRNKFKNRISRQLKRLDDCVGAIEATLSGFG---------------GKFSDPSKYFGGGGGPDDDDPSDQRPDEASKLDEGPKS
A0A6J1DM86 uncharacterized protein LOC1110223048.7e-2561.21Show/hide
Query:  VSKVKEYLVATNAEAQHMVRIMRPQKARAI------PDMPDVPELPAVP------------------ELPADVERGTQKRRVKDKGKNIVEDPIEEAQAL
        +SKVKEYLV+TNAE +HMVRIMRP +ARAI      PD P VP+ PAVP                  +LPAD+ERGTQ+RRVKDKGKNI+EDP+EEA+ L
Subjt:  VSKVKEYLVATNAEAQHMVRIMRPQKARAI------PDMPDVPELPAVP------------------ELPADVERGTQKRRVKDKGKNIVEDPIEEAQAL

Query:  DDAALDDPALDDAEPS
        DD AL  PALDDA PS
Subjt:  DDAALDDPALDDAEPS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACCCCATCTCGGACGTTTCTTGGGTCCCAACAGAAATTTGCACCCATCTCGGTTCCTAAAACCCTAAACTCCATCTCGCTTCCAAGACTTTCTCTTCCATTGTT
TCGCACTAAGAAGTCATCGATCGCAAGGACTGAGAAATTGAACGAAAAATTCAATCTCGAATTCAATCTCGGATTCAATGCTGGAGGAATCTGGCTCGGGATAGAATCCA
GGTTTGAAGTCGTATCCAAGGTTAAGGAATACTTGGTTGCGACGAATGCTGAGGCACAACACATGGTCCGTATCATGCGTCCTCAAAAAGCCCGCGCTATACCTGATATG
CCTGATGTACCTGAGCTGCCAGCTGTACCTGAGTTGCCTGCAGATGTGGAAAGGGGTACTCAGAAAAGAAGAGTGAAGGACAAAGGGAAGAATATCGTAGAGGATCCGAT
AGAAGAGGCCCAGGCATTGGACGATGCTGCATTAGACGATCCTGCATTAGACGATGCTGAACCCAGTGAAAATGGCGGTCAAGCACTACAGAAGAGGTTGAAACGGAATA
AATTCAAGAATAGGATCAGTAGACAGTTGAAAAGGCTTGATGACTGTGTTGGTGCTATCGAGGCCACACTAAGTGGCTTTGGGGGTAAATTCTCTGATCCGAGTAAATAT
TTTGGAGGTGGGGGTGGGCCCGATGATGATGATCCATCGGATCAAAGGCCTGATGAGGCCTCGAAGCTAGATGAAGGTCCGAAGAGTACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCACCCCATCTCGGACGTTTCTTGGGTCCCAACAGAAATTTGCACCCATCTCGGTTCCTAAAACCCTAAACTCCATCTCGCTTCCAAGACTTTCTCTTCCATTGTT
TCGCACTAAGAAGTCATCGATCGCAAGGACTGAGAAATTGAACGAAAAATTCAATCTCGAATTCAATCTCGGATTCAATGCTGGAGGAATCTGGCTCGGGATAGAATCCA
GGTTTGAAGTCGTATCCAAGGTTAAGGAATACTTGGTTGCGACGAATGCTGAGGCACAACACATGGTCCGTATCATGCGTCCTCAAAAAGCCCGCGCTATACCTGATATG
CCTGATGTACCTGAGCTGCCAGCTGTACCTGAGTTGCCTGCAGATGTGGAAAGGGGTACTCAGAAAAGAAGAGTGAAGGACAAAGGGAAGAATATCGTAGAGGATCCGAT
AGAAGAGGCCCAGGCATTGGACGATGCTGCATTAGACGATCCTGCATTAGACGATGCTGAACCCAGTGAAAATGGCGGTCAAGCACTACAGAAGAGGTTGAAACGGAATA
AATTCAAGAATAGGATCAGTAGACAGTTGAAAAGGCTTGATGACTGTGTTGGTGCTATCGAGGCCACACTAAGTGGCTTTGGGGGTAAATTCTCTGATCCGAGTAAATAT
TTTGGAGGTGGGGGTGGGCCCGATGATGATGATCCATCGGATCAAAGGCCTGATGAGGCCTCGAAGCTAGATGAAGGTCCGAAGAGTACTTGA
Protein sequenceShow/hide protein sequence
MSTPSRTFLGSQQKFAPISVPKTLNSISLPRLSLPLFRTKKSSIARTEKLNEKFNLEFNLGFNAGGIWLGIESRFEVVSKVKEYLVATNAEAQHMVRIMRPQKARAIPDM
PDVPELPAVPELPADVERGTQKRRVKDKGKNIVEDPIEEAQALDDAALDDPALDDAEPSENGGQALQKRLKRNKFKNRISRQLKRLDDCVGAIEATLSGFGGKFSDPSKY
FGGGGGPDDDDPSDQRPDEASKLDEGPKST