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MS025320 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025320
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionrab9 effector protein with kelch motifs-like
Genome locationscaffold25:1739641..1739987
RNA-Seq ExpressionMS025320
SyntenyMS025320
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR015915 - Kelch-type beta propeller


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048075.1 acyl-CoA-binding domain-containing protein 4 [Cucumis melo var. makuwa]2.3e-1691.67Show/hide
Query:  SSMVGGGGGGEIS-KKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG
        S +VGGGGGGE S KKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG
Subjt:  SSMVGGGGGGEIS-KKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG

KAG7030117.1 Rab9 effector protein with kelch motifs [Cucurbita argyrosperma subsp. argyrosperma]2.6e-1584.31Show/hide
Query:  MRSSMVGGGGGG--EISKKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG
        MRSS+ GGGGGG     KKAMWLYPKVMGF PSERWGHSACYYQGNVYVFG
Subjt:  MRSSMVGGGGGG--EISKKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG

TYJ96461.1 acyl-CoA-binding domain-containing protein 4 [Cucumis melo var. makuwa]2.3e-1691.67Show/hide
Query:  SSMVGGGGGGEIS-KKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG
        S +VGGGGGGE S KKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG
Subjt:  SSMVGGGGGGEIS-KKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG

XP_008453336.1 PREDICTED: acyl-CoA-binding domain-containing protein 4 [Cucumis melo]2.3e-1691.67Show/hide
Query:  SSMVGGGGGGEIS-KKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG
        S +VGGGGGGE S KKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG
Subjt:  SSMVGGGGGGEIS-KKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG

XP_022156432.1 rab9 effector protein with kelch motifs-like [Momordica charantia]1.2e-20100Show/hide
Query:  MRSSMVGGGGGGEISKKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG
        MRSSMVGGGGGGEISKKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG
Subjt:  MRSSMVGGGGGGEISKKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG

TrEMBL top hitse value%identityAlignment
A0A0A0LM40 Uncharacterized protein7.3e-1695.45Show/hide
Query:  GGGGGGEIS-KKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG
        GGGGGGE S KKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG
Subjt:  GGGGGGEIS-KKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG

A0A1S3BVZ8 acyl-CoA-binding domain-containing protein 41.1e-1691.67Show/hide
Query:  SSMVGGGGGGEIS-KKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG
        S +VGGGGGGE S KKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG
Subjt:  SSMVGGGGGGEIS-KKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG

A0A5A7U332 Acyl-CoA-binding domain-containing protein 41.1e-1691.67Show/hide
Query:  SSMVGGGGGGEIS-KKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG
        S +VGGGGGGE S KKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG
Subjt:  SSMVGGGGGGEIS-KKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG

A0A5D3BCW3 Acyl-CoA-binding domain-containing protein 41.1e-1691.67Show/hide
Query:  SSMVGGGGGGEIS-KKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG
        S +VGGGGGGE S KKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG
Subjt:  SSMVGGGGGGEIS-KKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG

A0A6J1DS20 rab9 effector protein with kelch motifs-like5.8e-21100Show/hide
Query:  MRSSMVGGGGGGEISKKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG
        MRSSMVGGGGGGEISKKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG
Subjt:  MRSSMVGGGGGGEISKKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTCTTCTATGGTGGGAGGAGGTGGAGGAGGAGAAATTTCCAAGAAGGCAATGTGGCTCTATCCTAAGGTCATGGGCTTCACCCCCTCTGAGCGATGGGGGCATTC
TGCTTGCTATTACCAAGGAAATGTCTATGTTTTTGGGGTTGTCTGGAACACCGAGTCTGAGCTGTCTGTGATTGCTGTGCTGTTTAAGCTATTTGCCTTCATCAATTCCG
CTAGTGAATGGCTGCCTGCTCCTTTTCTGTTCAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTCTTCTATGGTGGGAGGAGGTGGAGGAGGAGAAATTTCCAAGAAGGCAATGTGGCTCTATCCTAAGGTCATGGGCTTCACCCCCTCTGAGCGATGGGGGCATTC
TGCTTGCTATTACCAAGGAAATGTCTATGTTTTTGGGGTTGTCTGGAACACCGAGTCTGAGCTGTCTGTGATTGCTGTGCTGTTTAAGCTATTTGCCTTCATCAATTCCG
CTAGTGAATGGCTGCCTGCTCCTTTTCTGTTCAGATGA
Protein sequenceShow/hide protein sequence
MRSSMVGGGGGGEISKKAMWLYPKVMGFTPSERWGHSACYYQGNVYVFGVVWNTESELSVIAVLFKLFAFINSASEWLPAPFLFR