CuGenDBv2

Gene ID	MS025323
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Antigenic heat-stable 120 kDa protein
Genome location	scaffold25:1828592..1830286
RNA-Seq Expression	MS025323
Synteny	MS025323
Gene Ontology terms	GO:0006415 - translational termination (biological process) GO:0005737 - cytoplasm (cellular component) GO:0016149 - translation release factor activity, codon specific (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7021055.1 hypothetical protein SDJN02_17743, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.6e-84

86.8

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Query:  MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKANLYIVYLAYLEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL
        MSSSS+ITPEDVL+SLMNDGTIDSLRLKIINQLKAN   V LA  EELKNTTIKMVEQSKVLNTPGAEKQTKRELFD+LRQELEAPVLEKASKSVWELIL
Subjt:  MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKANLYIVYLAYLEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL

Query:  DNNGLGKEINDTVEKVFCRLSGREPPLFPPQNGDMASVKEPENEKGKGKEPEDDYLKEKSHSVRKRSFNDMNGREENNVANGAGENLALPEEHSRSP
        DN GLGKEINDTVEKVFCRLSG+EPPLFPP+NGD+ SVKE EN+KGKGKEPEDDY KEKS  VRKRSF DMNG++ENNV +GAGENLA  EEHSRSP
Subjt:  DNNGLGKEINDTVEKVFCRLSGREPPLFPPQNGDMASVKEPENEKGKGKEPEDDYLKEKSHSVRKRSFNDMNGREENNVANGAGENLALPEEHSRSP

XP_008453632.1 PREDICTED: uncharacterized protein LOC103494285 [Cucumis melo]

6.7e-83

86.29

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Query:  MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKANLYIVYLAYLEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL
        MSSSS+ITPEDVL+SLMNDGTIDSLRLKIINQLKAN         EELKNTTIKMVEQSKVLNTPGAEKQTKRELFD+LRQELEAPVLEKASKSVWELIL
Subjt:  MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKANLYIVYLAYLEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL

Query:  DNNGLGKEINDTVEKVFCRLSGREPPLFPPQNGDMASVKEPENEKGKGKEPEDDYLKEKSHSVRKRSFNDMNGREENNVANGAGENLALPEEHSRSP
        DNNGLGKEINDTVEKVFCRLSG+EPPLF PQNGDM  VKE E EKGKGKEPED+Y KEKS  VRKRSFNDMNG+EEN VA+GAGE+LA+PEEHSRSP
Subjt:  DNNGLGKEINDTVEKVFCRLSGREPPLFPPQNGDMASVKEPENEKGKGKEPEDDYLKEKSHSVRKRSFNDMNGREENNVANGAGENLALPEEHSRSP

XP_022156356.1 uncharacterized protein LOC111023270 [Momordica charantia]

9.3e-93

94.92

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Query:  MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKANLYIVYLAYLEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL
        MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKAN         EELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL
Subjt:  MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKANLYIVYLAYLEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL

Query:  DNNGLGKEINDTVEKVFCRLSGREPPLFPPQNGDMASVKEPENEKGKGKEPEDDYLKEKSHSVRKRSFNDMNGREENNVANGAGENLALPEEHSRSP
        DNNGLGKEINDTVEKVFCRLSGREPPLFPPQNGDMASVKEPENEKGKGKEPEDDYLKEKSHSVRKRSFNDMNGREENNVANGAGENLALPEE SRSP
Subjt:  DNNGLGKEINDTVEKVFCRLSGREPPLFPPQNGDMASVKEPENEKGKGKEPEDDYLKEKSHSVRKRSFNDMNGREENNVANGAGENLALPEEHSRSP

XP_022938214.1 uncharacterized protein LOC111444361 [Cucurbita moschata]

6.7e-83

85.28

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Query:  MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKANLYIVYLAYLEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL
        MSSSS+ITPEDVL+SLMNDGTIDSLRLKIINQLKAN         EELKNTTIKMVEQSKVLNTPGAEKQTKRELFD+LRQELEAPVLEKASKSVWELIL
Subjt:  MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKANLYIVYLAYLEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL

Query:  DNNGLGKEINDTVEKVFCRLSGREPPLFPPQNGDMASVKEPENEKGKGKEPEDDYLKEKSHSVRKRSFNDMNGREENNVANGAGENLALPEEHSRSP
        DN GLGKEINDTVEKVFCRLSG+EPPLFPP+NGD+ SVKE EN+KGKGKEPEDDY KEKS  VRKRSF DMNG++ENNV +GAGENLA  EEHSRSP
Subjt:  DNNGLGKEINDTVEKVFCRLSGREPPLFPPQNGDMASVKEPENEKGKGKEPEDDYLKEKSHSVRKRSFNDMNGREENNVANGAGENLALPEEHSRSP

XP_038890481.1 uncharacterized protein LOC120080024 isoform X1 [Benincasa hispida]

6.5e-86

87.31

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Query:  MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKANLYIVYLAYLEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL
        M SSS+ITPEDVL+SLMNDGTIDSLRLKIINQLKAN         EELKNTTIKMVEQSKVLNTPGAEKQTKRELFD+LRQELEAPVLEKASKSVWELIL
Subjt:  MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKANLYIVYLAYLEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL

Query:  DNNGLGKEINDTVEKVFCRLSGREPPLFPPQNGDMASVKEPENEKGKGKEPEDDYLKEKSHSVRKRSFNDMNGREENNVANGAGENLALPEEHSRSP
        DNNGLGKEINDTVEKVFCRLSG+EPPLFPPQNGDM SVKE ENEKGKGKEPED+Y KEKSH +RKRSFNDMNG+EEN VA+GAGE+LA+PEEHSRSP
Subjt:  DNNGLGKEINDTVEKVFCRLSGREPPLFPPQNGDMASVKEPENEKGKGKEPEDDYLKEKSHSVRKRSFNDMNGREENNVANGAGENLALPEEHSRSP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGM0 Uncharacterized protein

7.2e-83

84.77

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Query:  MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKANLYIVYLAYLEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL
        MSSSS+ITPEDVL+SLMNDGTIDSLRLKIINQLKAN         EELKNTTIKMVEQSKVLNTPGAEKQTKRELFD+LRQELEAPVLEKASKSVWELIL
Subjt:  MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKANLYIVYLAYLEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL

Query:  DNNGLGKEINDTVEKVFCRLSGREPPLFPPQNGDMASVKEPENEKGKGKEPEDDYLKEKSHSVRKRSFNDMNGREENNVANGAGENLALPEEHSRSP
        DNNGLGKEINDTVEKVFCRLSG+EPPLF PQNGDM  VKE E+EKGKGKEPED+Y KEKS  +RKRSFNDMNG+EE+ +A+GAGE+LA+PEEHSRSP
Subjt:  DNNGLGKEINDTVEKVFCRLSGREPPLFPPQNGDMASVKEPENEKGKGKEPEDDYLKEKSHSVRKRSFNDMNGREENNVANGAGENLALPEEHSRSP

A0A1S3BWQ6 uncharacterized protein LOC103494285

3.2e-83

86.29

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Query:  MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKANLYIVYLAYLEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL
        MSSSS+ITPEDVL+SLMNDGTIDSLRLKIINQLKAN         EELKNTTIKMVEQSKVLNTPGAEKQTKRELFD+LRQELEAPVLEKASKSVWELIL
Subjt:  MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKANLYIVYLAYLEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL

Query:  DNNGLGKEINDTVEKVFCRLSGREPPLFPPQNGDMASVKEPENEKGKGKEPEDDYLKEKSHSVRKRSFNDMNGREENNVANGAGENLALPEEHSRSP
        DNNGLGKEINDTVEKVFCRLSG+EPPLF PQNGDM  VKE E EKGKGKEPED+Y KEKS  VRKRSFNDMNG+EEN VA+GAGE+LA+PEEHSRSP
Subjt:  DNNGLGKEINDTVEKVFCRLSGREPPLFPPQNGDMASVKEPENEKGKGKEPEDDYLKEKSHSVRKRSFNDMNGREENNVANGAGENLALPEEHSRSP

A0A5D3BAZ9 Uncharacterized protein

3.2e-83

86.29

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Query:  MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKANLYIVYLAYLEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL
        MSSSS+ITPEDVL+SLMNDGTIDSLRLKIINQLKAN         EELKNTTIKMVEQSKVLNTPGAEKQTKRELFD+LRQELEAPVLEKASKSVWELIL
Subjt:  MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKANLYIVYLAYLEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL

Query:  DNNGLGKEINDTVEKVFCRLSGREPPLFPPQNGDMASVKEPENEKGKGKEPEDDYLKEKSHSVRKRSFNDMNGREENNVANGAGENLALPEEHSRSP
        DNNGLGKEINDTVEKVFCRLSG+EPPLF PQNGDM  VKE E EKGKGKEPED+Y KEKS  VRKRSFNDMNG+EEN VA+GAGE+LA+PEEHSRSP
Subjt:  DNNGLGKEINDTVEKVFCRLSGREPPLFPPQNGDMASVKEPENEKGKGKEPEDDYLKEKSHSVRKRSFNDMNGREENNVANGAGENLALPEEHSRSP

A0A6J1DQE8 uncharacterized protein LOC111023270

4.5e-93

94.92

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Query:  MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKANLYIVYLAYLEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL
        MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKAN         EELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL
Subjt:  MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKANLYIVYLAYLEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL

Query:  DNNGLGKEINDTVEKVFCRLSGREPPLFPPQNGDMASVKEPENEKGKGKEPEDDYLKEKSHSVRKRSFNDMNGREENNVANGAGENLALPEEHSRSP
        DNNGLGKEINDTVEKVFCRLSGREPPLFPPQNGDMASVKEPENEKGKGKEPEDDYLKEKSHSVRKRSFNDMNGREENNVANGAGENLALPEE SRSP
Subjt:  DNNGLGKEINDTVEKVFCRLSGREPPLFPPQNGDMASVKEPENEKGKGKEPEDDYLKEKSHSVRKRSFNDMNGREENNVANGAGENLALPEEHSRSP

A0A6J1FDE9 uncharacterized protein LOC111444361

3.2e-83

85.28

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Query:  MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKANLYIVYLAYLEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL
        MSSSS+ITPEDVL+SLMNDGTIDSLRLKIINQLKAN         EELKNTTIKMVEQSKVLNTPGAEKQTKRELFD+LRQELEAPVLEKASKSVWELIL
Subjt:  MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKANLYIVYLAYLEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL

Query:  DNNGLGKEINDTVEKVFCRLSGREPPLFPPQNGDMASVKEPENEKGKGKEPEDDYLKEKSHSVRKRSFNDMNGREENNVANGAGENLALPEEHSRSP
        DN GLGKEINDTVEKVFCRLSG+EPPLFPP+NGD+ SVKE EN+KGKGKEPEDDY KEKS  VRKRSF DMNG++ENNV +GAGENLA  EEHSRSP
Subjt:  DNNGLGKEINDTVEKVFCRLSGREPPLFPPQNGDMASVKEPENEKGKGKEPEDDYLKEKSHSVRKRSFNDMNGREENNVANGAGENLALPEEHSRSP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G12530.1 unknown protein

9.2e-14

34.71

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Query:  MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKANLYIVYLAYLEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL
        M  +  I+ E+V++ L +DG  D LRLKII +LK N         E+L+N  I +V++S  L   GA+    R+L D++ +E+ + +L + S  +W +I 
Subjt:  MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKANLYIVYLAYLEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL

Query:  DNNGLGKEINDTVEKVFCRLS
          +G+  EI +TV+ V+  LS
Subjt:  DNNGLGKEINDTVEKVFCRLS

AT1G56420.1 unknown protein

5.7e-48

61.71

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Query:  MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKANLYIVYLAYLEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL
        MSSSS+I PEDVL+ LMNDGTID+LRL+IINQLKAN         EELK+TTIKM E+SKVLNTPGAEKQTKRELFD+LRQELE PVLEKASKSVW+LI+
Subjt:  MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKANLYIVYLAYLEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELIL

Query:  DNNGLGKEINDTVEKVFCRLSGREPPLFPPQNGDMASVKEPENEKGKGKEPEDDYLKEKSHSVRKRSFNDMNGRE
        + +GLGKEIN+TVE+VFC LSG+EPP +   N     V++   E  K  E +D          +KRS +++N  E
Subjt:  DNNGLGKEINDTVEKVFCRLSGREPPLFPPQNGDMASVKEPENEKGKGKEPEDDYLKEKSHSVRKRSFNDMNGRE

Sequences

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CDS sequence

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ATGAGTTCCTCATCAATAATAACTCCAGAAGACGTGCTGCAGTCGCTGATGAATGATGGTACTATCGATTCTCTCAGGTTGAAGATCATTAACCAGCTCAAAGCCAATCT
CTACATTGTTTACTTGGCTTATCTGGAAGAGCTTAAGAATACCACCATTAAAATGGTAGAACAGAGCAAAGTCCTTAATACCCCTGGGGCAGAAAAGCAGACCAAAAGAG
AGTTGTTTGATTCTCTTCGACAGGAACTTGAAGCACCAGTGCTTGAGAAAGCCTCCAAATCTGTTTGGGAATTGATTTTGGACAACAATGGGTTGGGCAAAGAAATAAAC
GACACAGTCGAAAAAGTATTTTGTCGATTGAGTGGCAGGGAACCTCCATTGTTTCCTCCTCAAAATGGGGATATGGCATCAGTCAAAGAACCTGAGAATGAGAAAGGCAA
GGGAAAAGAGCCTGAAGATGATTACCTCAAGGAGAAATCACACTCTGTCAGGAAAAGGAGTTTCAATGATATGAATGGCAGAGAGGAAAACAATGTTGCAAATGGAGCTG
GTGAAAATCTAGCTCTACCTGAAGAACACAGTAGATCACCTTAG

mRNA sequence

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Protein sequence

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MSSSSIITPEDVLQSLMNDGTIDSLRLKIINQLKANLYIVYLAYLEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDSLRQELEAPVLEKASKSVWELILDNNGLGKEIN
DTVEKVFCRLSGREPPLFPPQNGDMASVKEPENEKGKGKEPEDDYLKEKSHSVRKRSFNDMNGREENNVANGAGENLALPEEHSRSP

MS025323 (gene) of Bitter gourd (TR) v1 genome