CuGenDBv2

Gene ID	MS025463
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Transmembrane protein
Genome location	scaffold412:382617..382967
RNA-Seq Expression	MS025463
Synteny	MS025463
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6608627.1 hypothetical protein SDJN03_01969, partial [Cucurbita argyrosperma subsp. sororia]

2.1e-23

57.25

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Query:  MISAYQSRNNFTYDLIVRTRVDWFWNGPLRPK--------TSSRATTWYCRDR-HTTDLNTSTVALSRLALIPKLDATGLQQLSSV----------GVAF
        MI  YQ  NNFTYD IVRTRVD FWN PLRP             ++     DR    DLNTSTVALSRLALIPKLDA GL+QL+S           GV F
Subjt:  MISAYQSRNNFTYDLIVRTRVDWFWNGPLRPK--------TSSRATTWYCRDR-HTTDLNTSTVALSRLALIPKLDATGLQQLSSV----------GVAF

Query:  RAIRQLFCIVMERQYDFMPWGFGVPVAAMWS
           R  FCIV ERQY+F P GFGVPVAAM S
Subjt:  RAIRQLFCIVMERQYDFMPWGFGVPVAAMWS

KAG7037943.1 hypothetical protein SDJN02_01576 [Cucurbita argyrosperma subsp. argyrosperma]

2.1e-23

57.25

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Query:  MISAYQSRNNFTYDLIVRTRVDWFWNGPLRPK--------TSSRATTWYCRDR-HTTDLNTSTVALSRLALIPKLDATGLQQLSSV----------GVAF
        MI  YQ  NNFTYD IVRTRVD FWN PLRP             ++     DR    DLNTSTVALSRLALIPKLDA GL+QL+S           GV F
Subjt:  MISAYQSRNNFTYDLIVRTRVDWFWNGPLRPK--------TSSRATTWYCRDR-HTTDLNTSTVALSRLALIPKLDATGLQQLSSV----------GVAF

Query:  RAIRQLFCIVMERQYDFMPWGFGVPVAAMWS
           R  FCIV ERQY+F P GFGVPVAAM S
Subjt:  RAIRQLFCIVMERQYDFMPWGFGVPVAAMWS

XP_022132763.1 uncharacterized protein LOC111005544 [Momordica charantia]

3.2e-32

65.15

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Query:  MISAYQSRNNFTYDLIVRTRVDWFWNGPLRPK--------TSSRATTWYCRDRH-TTDLNTSTVALSRLALIPKLDATGL----------QQLSSVGVAF
        MI AYQSRNNFTYD IVRTRVD FWNGPLRP+            ++     DR    DLNTSTVALSRLALIP LDA GL          +QLSS GVAF
Subjt:  MISAYQSRNNFTYDLIVRTRVDWFWNGPLRPK--------TSSRATTWYCRDRH-TTDLNTSTVALSRLALIPKLDATGL----------QQLSSVGVAF

Query:  RAIRQLFCIVMERQYDFMPWGFGVPVAAMWSA
        RAIRQ FCIV ERQYD+ P GFGVPVAAMWSA
Subjt:  RAIRQLFCIVMERQYDFMPWGFGVPVAAMWSA

XP_022981750.1 uncharacterized protein LOC111480808 [Cucurbita maxima]

7.1e-24

57.25

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Query:  MISAYQSRNNFTYDLIVRTRVDWFWNGPLRPKT--------SSRATTWYCRDR-HTTDLNTSTVALSRLALIPKLDATGLQQLSSV----------GVAF
        MI  YQ  NNFTYD IVRTRVD FWN PLRP +           ++     DR    DLNTSTVALSRLALIPKLDA GL+QL+S           GV F
Subjt:  MISAYQSRNNFTYDLIVRTRVDWFWNGPLRPKT--------SSRATTWYCRDR-HTTDLNTSTVALSRLALIPKLDATGLQQLSSV----------GVAF

Query:  RAIRQLFCIVMERQYDFMPWGFGVPVAAMWS
           R  FCIV ERQY+F P GFGVPVAAM S
Subjt:  RAIRQLFCIVMERQYDFMPWGFGVPVAAMWS

XP_023522461.1 uncharacterized protein LOC111786385 [Cucurbita pepo subsp. pepo]

2.1e-23

57.25

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Query:  MISAYQSRNNFTYDLIVRTRVDWFWNGPLRPK--------TSSRATTWYCRDR-HTTDLNTSTVALSRLALIPKLDATGLQQLSSV----------GVAF
        MI  YQ  NNFTYD IVRTRVD FWN PLRP             ++     DR    DLNTSTVALSRLALIPKLDA GL+QL+S           GV F
Subjt:  MISAYQSRNNFTYDLIVRTRVDWFWNGPLRPK--------TSSRATTWYCRDR-HTTDLNTSTVALSRLALIPKLDATGLQQLSSV----------GVAF

Query:  RAIRQLFCIVMERQYDFMPWGFGVPVAAMWS
           R  FCIV ERQY+F P GFGVPVAAM S
Subjt:  RAIRQLFCIVMERQYDFMPWGFGVPVAAMWS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BV06 uncharacterized protein LOC103493803

1.9e-22

53.44

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Query:  MISAYQSRNNFTYDLIVRTRVDWFWNGPLRPK--------TSSRATTWYCRDRH-TTDLNTSTVALSRLALIPKLDATGLQQLSS----------VGVAF
        MI  YQ  NNFTYD +VRTRVD +WN PLRP           S ++     DR    DLNTSTVALSRL LIP LDA G  QL+S          +GV F
Subjt:  MISAYQSRNNFTYDLIVRTRVDWFWNGPLRPK--------TSSRATTWYCRDRH-TTDLNTSTVALSRLALIPKLDATGLQQLSS----------VGVAF

Query:  RAIRQLFCIVMERQYDFMPWGFGVPVAAMWS
          +R  FCIV ERQY+F P  FGVPVAAM S
Subjt:  RAIRQLFCIVMERQYDFMPWGFGVPVAAMWS

A0A5D3D8Q7 Uncharacterized protein

1.9e-22

53.44

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Query:  MISAYQSRNNFTYDLIVRTRVDWFWNGPLRPK--------TSSRATTWYCRDRH-TTDLNTSTVALSRLALIPKLDATGLQQLSS----------VGVAF
        MI  YQ  NNFTYD +VRTRVD +WN PLRP           S ++     DR    DLNTSTVALSRL LIP LDA G  QL+S          +GV F
Subjt:  MISAYQSRNNFTYDLIVRTRVDWFWNGPLRPK--------TSSRATTWYCRDRH-TTDLNTSTVALSRLALIPKLDATGLQQLSS----------VGVAF

Query:  RAIRQLFCIVMERQYDFMPWGFGVPVAAMWS
          +R  FCIV ERQY+F P  FGVPVAAM S
Subjt:  RAIRQLFCIVMERQYDFMPWGFGVPVAAMWS

A0A6J1BX88 uncharacterized protein LOC111005544

1.5e-32

65.15

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Query:  MISAYQSRNNFTYDLIVRTRVDWFWNGPLRPK--------TSSRATTWYCRDRH-TTDLNTSTVALSRLALIPKLDATGL----------QQLSSVGVAF
        MI AYQSRNNFTYD IVRTRVD FWNGPLRP+            ++     DR    DLNTSTVALSRLALIP LDA GL          +QLSS GVAF
Subjt:  MISAYQSRNNFTYDLIVRTRVDWFWNGPLRPK--------TSSRATTWYCRDRH-TTDLNTSTVALSRLALIPKLDATGL----------QQLSSVGVAF

Query:  RAIRQLFCIVMERQYDFMPWGFGVPVAAMWSA
        RAIRQ FCIV ERQYD+ P GFGVPVAAMWSA
Subjt:  RAIRQLFCIVMERQYDFMPWGFGVPVAAMWSA

A0A6J1FKC2 uncharacterized protein LOC111446208

2.2e-23

56.49

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Query:  MISAYQSRNNFTYDLIVRTRVDWFWNGPLRPK--------TSSRATTWYCRDR-HTTDLNTSTVALSRLALIPKLDATGLQQLSSV----------GVAF
        MI  YQ  NNFTYD IVRTRVD FWN PLRP             ++     DR    DLNTSTVALSRLALIPKLDA GL+QL+S           GV F
Subjt:  MISAYQSRNNFTYDLIVRTRVDWFWNGPLRPK--------TSSRATTWYCRDR-HTTDLNTSTVALSRLALIPKLDATGLQQLSSV----------GVAF

Query:  RAIRQLFCIVMERQYDFMPWGFGVPVAAMWS
           R  FCIV ERQY+F P G+GVPVAAM S
Subjt:  RAIRQLFCIVMERQYDFMPWGFGVPVAAMWS

A0A6J1J0H9 uncharacterized protein LOC111480808

3.4e-24

57.25

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Query:  MISAYQSRNNFTYDLIVRTRVDWFWNGPLRPKT--------SSRATTWYCRDR-HTTDLNTSTVALSRLALIPKLDATGLQQLSSV----------GVAF
        MI  YQ  NNFTYD IVRTRVD FWN PLRP +           ++     DR    DLNTSTVALSRLALIPKLDA GL+QL+S           GV F
Subjt:  MISAYQSRNNFTYDLIVRTRVDWFWNGPLRPKT--------SSRATTWYCRDR-HTTDLNTSTVALSRLALIPKLDATGLQQLSSV----------GVAF

Query:  RAIRQLFCIVMERQYDFMPWGFGVPVAAMWS
           R  FCIV ERQY+F P GFGVPVAAM S
Subjt:  RAIRQLFCIVMERQYDFMPWGFGVPVAAMWS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G76250.1 unknown protein

4.6e-21

48.51

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Query:  MISAYQSRNNFTYDLIVRTRVDWFWNGPLRPK--------TSSRATTWYCRDRH-TTDLNTSTVALSRLALIPKLDATGLQQLSSVGVAFRAIRQL----
        MI AYQ+ NNFTYD IVRTRVD +W  PL P+            ++     DR    DLNTSTVALSRL+LIP LD+ GL  L+S   AF+A  QL    
Subjt:  MISAYQSRNNFTYDLIVRTRVDWFWNGPLRPK--------TSSRATTWYCRDRH-TTDLNTSTVALSRLALIPKLDATGLQQLSSVGVAFRAIRQL----

Query:  ---------FCIVMERQYDFMPWGFGVPVAAMWS
                 FCI+ +R YDF P+ +GVPVAA+ S
Subjt:  ---------FCIVMERQYDFMPWGFGVPVAAMWS

Sequences

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CDS sequence

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ATGATCAGCGCGTACCAATCACGCAACAACTTCACTTACGACTTGATTGTCCGGACTCGGGTTGACTGGTTCTGGAACGGCCCGCTCCGACCGAAAACTTCTTCCCGGGC
CACTACGTGGTACTGCCGGGATCGTCATACGACAGACCTAAACACCTCGACCGTCGCTCTCTCGCGGCTGGCTCTGATTCCGAAACTGGACGCCACCGGGCTCCAGCAGC
TGAGCAGCGTAGGGGTGGCGTTTCGGGCGATACGGCAGTTGTTCTGTATAGTGATGGAGCGGCAGTATGATTTTATGCCGTGGGGATTCGGAGTGCCGGTGGCGGCGATG
TGGAGTGCGTGGGGAAGGTGA

mRNA sequence

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Protein sequence

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MISAYQSRNNFTYDLIVRTRVDWFWNGPLRPKTSSRATTWYCRDRHTTDLNTSTVALSRLALIPKLDATGLQQLSSVGVAFRAIRQLFCIVMERQYDFMPWGFGVPVAAM
WSAWGR

MS025463 (gene) of Bitter gourd (TR) v1 genome