; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS025479 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025479
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionrepetitive proline-rich cell wall protein-like
Genome locationscaffold13:651604..652017
RNA-Seq ExpressionMS025479
SyntenyMS025479
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAI52952.1 similar to Bile-salt-activated lipase precursor [Citrullus lanatus subsp. vulgaris]2.8e-3565.06Show/hide
Query:  SSSYLLA-LLALLTVVLTEPAVGDYVDKPEPPKPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVAPIYKPPKPPVAPVYKPPKPPVAPVYK----
        SS Y LA LL LLTVVLT P VGDY  K  PP+PPSVP YKPPKPPV PIYKPPKPPVAPIYKPPKP V PIYKPPKPPV P+ KPPKPPV P+YK    
Subjt:  SSSYLLA-LLALLTVVLTEPAVGDYVDKPEPPKPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVAPIYKPPKPPVAPVYKPPKPPVAPVYK----

Query:  ----------------------PVTPIYKPPKPPVAPIYKPPVQIPK---PPPYPYKPPYKPPASN
                              PV PIYKPPKPPV PI+KPP  I K   PP Y YKPPYKPP SN
Subjt:  ----------------------PVTPIYKPPKPPVAPIYKPPVQIPK---PPPYPYKPPYKPPASN

KAA0065668.1 repetitive proline-rich cell wall protein 1-like [Cucumis melo var. makuwa]2.0e-3369.66Show/hide
Query:  SSSYLLA-LLALLTVVLTEPAVGDYVDKPEPPKPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVAPIYKPPKPPVAPVYKPPKPPVAPVYK----
        SS+Y LA LLALL+VVLT+P + DY+  PE P PP  P Y+PPKPP VPIY+PPKPPV PIYKPPKP VAPIYKPPKPPVAP+YKPPKPPVAP+YK    
Subjt:  SSSYLLA-LLALLTVVLTEPAVGDYVDKPEPPKPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVAPIYKPPKPPVAPVYKPPKPPVAPVYK----

Query:  ---PVTPIYKPPKPPVAPIYKPP----VQIPKPPPYPYKPPYKPP
           PV PIYKPPKPPV PIYKPP      I KPP  P  P YKPP
Subjt:  ---PVTPIYKPPKPPVAPIYKPP----VQIPKPPPYPYKPPYKPP

XP_016902582.1 PREDICTED: repetitive proline-rich cell wall protein 1-like [Cucumis melo]9.5e-3670.07Show/hide
Query:  SSSYLLA-LLALLTVVLTEPAVGDYVDKPEPPKPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVAPIYKPPKPPVAPVYKPPKPPVAPVYK----
        SS+Y LA LLALL+VVLT+P + DY+  PE P PP  P Y+PPKPP VPIY+PPKPPV PIYKPPKP VAPIYKPPKPPVAP+YKPPKPPVAP+YK    
Subjt:  SSSYLLA-LLALLTVVLTEPAVGDYVDKPEPPKPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVAPIYKPPKPPVAPVYKPPKPPVAPVYK----

Query:  ---PVTPIYKPPKPPVAPIYKPPVQIPKP---PPYPYKPPYKPPASN
           PV PIYKPPKPPV PIYKPP     P   PP PY PPYKPP+ N
Subjt:  ---PVTPIYKPPKPPVAPIYKPPVQIPKP---PPYPYKPPYKPPASN

XP_022138628.1 repetitive proline-rich cell wall protein-like [Momordica charantia]1.0e-5089.78Show/hide
Query:  MSSSYLLALLALLTVVLTEPAVGDYVDKPEPPKPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVAPIYKPPKPPVAPVYKPPKPPVAPVYKPVTP
        MSSSYLLALLALLTVVLTEPAVGDYVDKPEPPKP  VPTYKPPKPPVVPIYKPPKPP           +APIYKPPKPPVAPVYKPPKPPVAPVYKPVTP
Subjt:  MSSSYLLALLALLTVVLTEPAVGDYVDKPEPPKPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVAPIYKPPKPPVAPVYKPPKPPVAPVYKPVTP

Query:  IYKPPKPPVAPIYKPPVQIPKPPPYPYKPPYKPPASN
        IYKPPKPPVAPIYKPPVQIPKPPPYPYKPPYKPPASN
Subjt:  IYKPPKPPVAPIYKPPVQIPKPPPYPYKPPYKPPASN

XP_031736707.1 repetitive proline-rich cell wall protein 2 [Cucumis sativus]4.0e-3469.18Show/hide
Query:  SSSYLLA-LLALLTVVLTEPAVGDYVDKPEPPKPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVAPIYKPPKPPVAPVYKPPKPPVAPVYK----
        SS+YLLA LL LL+VVLT+P VGDY+  P+PP PP +P Y+PPKPPV PIY+PP PP+ PIY+PPKP VAPIYKPPKPPV+P+YKPPKPPVAP+YK    
Subjt:  SSSYLLA-LLALLTVVLTEPAVGDYVDKPEPPKPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVAPIYKPPKPPVAPVYKPPKPPVAPVYK----

Query:  PVTPIYKPPKPPVAPIYKPPVQIPKPPPYP-YKPP-------YKPP
        PV PIYKPPKPP+API+KPP + PKPP  P YKPP       YKPP
Subjt:  PVTPIYKPPKPPVAPIYKPPVQIPKPPPYP-YKPP-------YKPP

TrEMBL top hitse value%identityAlignment
A0A0A0LLJ1 Uncharacterized protein4.3e-3469.01Show/hide
Query:  SSSYLLA-LLALLTVVLTEPAVGDYVDKPEPPKPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVAPIYKPPKPPVAPVYKPPKPPVAPVYK----
        SS+YLLA LL LL+VVLT+P VGDY+  P+PP PP +P Y+PPKPPV PIY+PP PP+ PIY+PPKP VAPI+KPPKPPV P+YKPPKPPV P+YK    
Subjt:  SSSYLLA-LLALLTVVLTEPAVGDYVDKPEPPKPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVAPIYKPPKPPVAPVYKPPKPPVAPVYK----

Query:  PVTPIYKPPKPPVAPIYKPP----VQIPKPPPYPYKPPYKPP
        PV PIYKPPKPPV PIYKPP    V I KPP  P  P YKPP
Subjt:  PVTPIYKPPKPPVAPIYKPP----VQIPKPPPYPYKPPYKPP

A0A1S4E2Y1 repetitive proline-rich cell wall protein 1-like4.6e-3670.07Show/hide
Query:  SSSYLLA-LLALLTVVLTEPAVGDYVDKPEPPKPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVAPIYKPPKPPVAPVYKPPKPPVAPVYK----
        SS+Y LA LLALL+VVLT+P + DY+  PE P PP  P Y+PPKPP VPIY+PPKPPV PIYKPPKP VAPIYKPPKPPVAP+YKPPKPPVAP+YK    
Subjt:  SSSYLLA-LLALLTVVLTEPAVGDYVDKPEPPKPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVAPIYKPPKPPVAPVYKPPKPPVAPVYK----

Query:  ---PVTPIYKPPKPPVAPIYKPPVQIPKP---PPYPYKPPYKPPASN
           PV PIYKPPKPPV PIYKPP     P   PP PY PPYKPP+ N
Subjt:  ---PVTPIYKPPKPPVAPIYKPPVQIPKP---PPYPYKPPYKPPASN

A0A5D3CUA2 Repetitive proline-rich cell wall protein 1-like9.6e-3469.66Show/hide
Query:  SSSYLLA-LLALLTVVLTEPAVGDYVDKPEPPKPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVAPIYKPPKPPVAPVYKPPKPPVAPVYK----
        SS+Y LA LLALL+VVLT+P + DY+  PE P PP  P Y+PPKPP VPIY+PPKPPV PIYKPPKP VAPIYKPPKPPVAP+YKPPKPPVAP+YK    
Subjt:  SSSYLLA-LLALLTVVLTEPAVGDYVDKPEPPKPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVAPIYKPPKPPVAPVYKPPKPPVAPVYK----

Query:  ---PVTPIYKPPKPPVAPIYKPP----VQIPKPPPYPYKPPYKPP
           PV PIYKPPKPPV PIYKPP      I KPP  P  P YKPP
Subjt:  ---PVTPIYKPPKPPVAPIYKPP----VQIPKPPPYPYKPPYKPP

A0A6J1CDI7 repetitive proline-rich cell wall protein-like5.1e-5189.78Show/hide
Query:  MSSSYLLALLALLTVVLTEPAVGDYVDKPEPPKPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVAPIYKPPKPPVAPVYKPPKPPVAPVYKPVTP
        MSSSYLLALLALLTVVLTEPAVGDYVDKPEPPKP  VPTYKPPKPPVVPIYKPPKPP           +APIYKPPKPPVAPVYKPPKPPVAPVYKPVTP
Subjt:  MSSSYLLALLALLTVVLTEPAVGDYVDKPEPPKPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVAPIYKPPKPPVAPVYKPPKPPVAPVYKPVTP

Query:  IYKPPKPPVAPIYKPPVQIPKPPPYPYKPPYKPPASN
        IYKPPKPPVAPIYKPPVQIPKPPPYPYKPPYKPPASN
Subjt:  IYKPPKPPVAPIYKPPVQIPKPPPYPYKPPYKPPASN

D1MWZ2 Similar to Bile-salt-activated lipase1.3e-3565.06Show/hide
Query:  SSSYLLA-LLALLTVVLTEPAVGDYVDKPEPPKPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVAPIYKPPKPPVAPVYKPPKPPVAPVYK----
        SS Y LA LL LLTVVLT P VGDY  K  PP+PPSVP YKPPKPPV PIYKPPKPPVAPIYKPPKP V PIYKPPKPPV P+ KPPKPPV P+YK    
Subjt:  SSSYLLA-LLALLTVVLTEPAVGDYVDKPEPPKPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVAPIYKPPKPPVAPVYKPPKPPVAPVYK----

Query:  ----------------------PVTPIYKPPKPPVAPIYKPPVQIPK---PPPYPYKPPYKPPASN
                              PV PIYKPPKPPV PI+KPP  I K   PP Y YKPPYKPP SN
Subjt:  ----------------------PVTPIYKPPKPPVAPIYKPPVQIPK---PPPYPYKPPYKPPASN

SwissProt top hitse value%identityAlignment
Q9T0I5 Proline-rich protein 41.3e-0642.86Show/hide
Query:  PEPPKPPSVPTYKPP----KPPVVPIYKPP----KPPVAPIYKPPK---------PSVAPIYKPP----------KPPVAPVYKPP-----------KPP
        P+   PP VP YKPP    KPP VP+YKPP     PP  P++K PK         P   P++KPP           PP  PV+KPP            PP
Subjt:  PEPPKPPSVPTYKPP----KPPVVPIYKPP----KPPVAPIYKPPK---------PSVAPIYKPP----------KPPVAPVYKPP-----------KPP

Query:  VAPVYKP----------VTPIYKPPKPPVAPIYKPPVQIPKPPPYPYKPPYKPP
          PVYKP          + PI K P PP  PIYKPPV IPK P  P  P YKPP
Subjt:  VAPVYKP----------VTPIYKPPKPPVAPIYKPPVQIPKPPPYPYKPPYKPP

Q9XIL9 Pollen-specific leucine-rich repeat extensin-like protein 32.4e-0542.97Show/hide
Query:  VDKPEPP----KPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVA-----PIYKPPKP---PVAPVYKPPKP---PVAPVYKPVTPIYKPPKPPV-
        V  P PP     PP  P Y PP PP  P+Y PP PP  P+Y PP P        P++ PP P   P  PV+ PP P   P  PV+ P  P+Y PP PPV 
Subjt:  VDKPEPP----KPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVA-----PIYKPPKP---PVAPVYKPPKP---PVAPVYKPVTPIYKPPKPPV-

Query:  ---APIYKPPVQIPKPPPYPYKPPYKPP
            P++ PP  +  PPP  Y PP  PP
Subjt:  ---APIYKPPVQIPKPPPYPYKPPYKPP

Arabidopsis top hitse value%identityAlignment
AT2G15880.1 Leucine-rich repeat (LRR) family protein1.7e-0642.97Show/hide
Query:  VDKPEPP----KPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVA-----PIYKPPKP---PVAPVYKPPKP---PVAPVYKPVTPIYKPPKPPV-
        V  P PP     PP  P Y PP PP  P+Y PP PP  P+Y PP P        P++ PP P   P  PV+ PP P   P  PV+ P  P+Y PP PPV 
Subjt:  VDKPEPP----KPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVA-----PIYKPPKP---PVAPVYKPPKP---PVAPVYKPVTPIYKPPKPPV-

Query:  ---APIYKPPVQIPKPPPYPYKPPYKPP
            P++ PP  +  PPP  Y PP  PP
Subjt:  ---APIYKPPVQIPKPPPYPYKPPYKPP

AT4G13340.1 Leucine-rich repeat (LRR) family protein1.2e-0443.86Show/hide
Query:  YVDKPEPPKPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVAPIYKPPKPPVAPVYKPPKPPVAPVYK-PVTPIYKPPKPPVAPIYKPPVQIPKPP
        Y   P PP PP  P Y PP PP      PP PP  P+Y PP PS  P   PP P  +P   PP PP  PVY  P  P+Y  P PP +P   P      PP
Subjt:  YVDKPEPPKPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVAPIYKPPKPPVAPVYKPPKPPVAPVYK-PVTPIYKPPKPPVAPIYKPPVQIPKPP

Query:  PYPYKPP---YKPP
        P P+ PP   + PP
Subjt:  PYPYKPP---YKPP

AT4G38770.1 proline-rich protein 49.0e-0842.86Show/hide
Query:  PEPPKPPSVPTYKPP----KPPVVPIYKPP----KPPVAPIYKPPK---------PSVAPIYKPP----------KPPVAPVYKPP-----------KPP
        P+   PP VP YKPP    KPP VP+YKPP     PP  P++K PK         P   P++KPP           PP  PV+KPP            PP
Subjt:  PEPPKPPSVPTYKPP----KPPVVPIYKPP----KPPVAPIYKPPK---------PSVAPIYKPP----------KPPVAPVYKPP-----------KPP

Query:  VAPVYKP----------VTPIYKPPKPPVAPIYKPPVQIPKPPPYPYKPPYKPP
          PVYKP          + PI K P PP  PIYKPPV IPK P  P  P YKPP
Subjt:  VAPVYKP----------VTPIYKPPKPPVAPIYKPPVQIPKPPPYPYKPPYKPP

AT5G56330.1 alpha carbonic anhydrase 84.6e-0444.09Show/hide
Query:  LLALLALLTVVLTEPAVGDYVDKPEPPKPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVAPIYKPPKPPVAPVYKPPKP-----PVAPVYKPVTP
        L+ +   +T+V + PA       P+PPKP   P   PPKP   P   PPKP   P   PPKP  AP   PPKP  AP   PPKP     P  P  KP TP
Subjt:  LLALLALLTVVLTEPAVGDYVDKPEPPKPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVAPIYKPPKPPVAPVYKPPKP-----PVAPVYKPVTP

Query:  IYKPPKPPVAPIYKP-PVQIPKPPPYP
           PPKP  AP   P P   PKP P P
Subjt:  IYKPPKPPVAPIYKP-PVQIPKPPPYP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCTCCTACTTGTTAGCTCTCCTTGCGCTGCTCACGGTGGTTCTCACCGAACCCGCGGTTGGAGATTACGTCGATAAGCCTGAACCTCCAAAACCGCCATCCGT
TCCAACATACAAGCCACCCAAGCCTCCGGTGGTTCCCATATACAAACCACCCAAGCCTCCAGTGGCTCCAATCTACAAACCACCCAAGCCTTCGGTGGCTCCGATCTACA
AACCACCCAAGCCTCCGGTGGCTCCGGTATACAAACCACCCAAGCCTCCAGTAGCTCCGGTGTACAAACCGGTGACTCCGATATACAAACCGCCCAAGCCTCCGGTGGCT
CCAATATACAAACCACCGGTTCAAATTCCCAAACCACCACCTTACCCATACAAGCCTCCCTACAAGCCACCAGCATCCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCCTCCTACTTGTTAGCTCTCCTTGCGCTGCTCACGGTGGTTCTCACCGAACCCGCGGTTGGAGATTACGTCGATAAGCCTGAACCTCCAAAACCGCCATCCGT
TCCAACATACAAGCCACCCAAGCCTCCGGTGGTTCCCATATACAAACCACCCAAGCCTCCAGTGGCTCCAATCTACAAACCACCCAAGCCTTCGGTGGCTCCGATCTACA
AACCACCCAAGCCTCCGGTGGCTCCGGTATACAAACCACCCAAGCCTCCAGTAGCTCCGGTGTACAAACCGGTGACTCCGATATACAAACCGCCCAAGCCTCCGGTGGCT
CCAATATACAAACCACCGGTTCAAATTCCCAAACCACCACCTTACCCATACAAGCCTCCCTACAAGCCACCAGCATCCAACTGA
Protein sequenceShow/hide protein sequence
MSSSYLLALLALLTVVLTEPAVGDYVDKPEPPKPPSVPTYKPPKPPVVPIYKPPKPPVAPIYKPPKPSVAPIYKPPKPPVAPVYKPPKPPVAPVYKPVTPIYKPPKPPVA
PIYKPPVQIPKPPPYPYKPPYKPPASN