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MS025482 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025482
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold13:723785..724585
RNA-Seq ExpressionMS025482
SyntenyMS025482
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD21825.1 TPA_asm: hypothetical protein HUJ06_023288 [Nelumbo nucifera]3.9e-0934.31Show/hide
Query:  PKPNLFGGVRGQRIKVDSHMIVVGVVEFLIGKHIKFNSKDVVVGVPIERKFEKTQILDRASPFDSRHRDEDENEAMTGQNVLVGSHGKDEGDGEGVNTRR
        P  +  GG+R +++ VD+ ++++ +VE LI +HIKF+++ V++ V ++   ++ ++  R    DS  R +DE+  M G+ V+V S G+DEG  EG +  R
Subjt:  PKPNLFGGVRGQRIKVDSHMIVVGVVEFLIGKHIKFNSKDVVVGVPIERKFEKTQILDRASPFDSRHRDEDENEAMTGQNVLVGSHGKDEGDGEGVNTRR

Query:  IG
        +G
Subjt:  IG
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCGACGATCAAAATCCACGAAATCGCTGCGAGGAAACAAAGGATGAGGAAATGCTGACTGTCACTCGGGCGATGAACCACTTCGATTTGGTGATCGGGTCTTTTGG
GAGGACGAATGAGAGCAAACCAGTGGTGATCAAACTCTCGCTTAACGAAAAATTGGTGTTAAATCTTGTGGCTCTGTACCAACTGCCCGGTGGCGCTCGTGAACCCCACA
AACATTTCGTCGATGAAAATTTCAGAAAGATTGACAGAGACATTAAACAATGGCCGCCACGGCCTTCTCATCCCCGCCGGCGCCATGGTGACGTTCATGAGAAAATCGGA
ATAGTCGATCCAAACTTGGTAATTTTCGCCGCTATTAAGCTTGAGTCTATTGAACGAATCCCCTCCACTACGGCCGCCGTCCGACCAAAACCCAACCTCTTCGGTGGAGT
TCGAGGTCAGAGAATTAAAGTTGATTCCCACATGATTGTCGTTGGGGTCGTTGAATTCTTGATTGGCAAACACATCAAATTCAATTCCAAAGACGTGGTTGTTGGGGTTC
CTATTGAGCGTAAATTTGAGAAAACCCAGATTCTGGACAGAGCTAGTCCTTTCGATTCCCGCCACCGGGACGAAGATGAAAACGAGGCCATGACCGGGCAAAATGTCCTT
GTAGGGAGCCATGGCAAAGATGAAGGAGATGGAGAAGGGGTAAACACGAGAAGAATTGGGGTCCTTGGTGGGGATTTTGGATCGGTACAGAGCGACCACGGTCCTTGGTG
GGGATTTTGGGGTCCTTGGTGGTTAATATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCGACGATCAAAATCCACGAAATCGCTGCGAGGAAACAAAGGATGAGGAAATGCTGACTGTCACTCGGGCGATGAACCACTTCGATTTGGTGATCGGGTCTTTTGG
GAGGACGAATGAGAGCAAACCAGTGGTGATCAAACTCTCGCTTAACGAAAAATTGGTGTTAAATCTTGTGGCTCTGTACCAACTGCCCGGTGGCGCTCGTGAACCCCACA
AACATTTCGTCGATGAAAATTTCAGAAAGATTGACAGAGACATTAAACAATGGCCGCCACGGCCTTCTCATCCCCGCCGGCGCCATGGTGACGTTCATGAGAAAATCGGA
ATAGTCGATCCAAACTTGGTAATTTTCGCCGCTATTAAGCTTGAGTCTATTGAACGAATCCCCTCCACTACGGCCGCCGTCCGACCAAAACCCAACCTCTTCGGTGGAGT
TCGAGGTCAGAGAATTAAAGTTGATTCCCACATGATTGTCGTTGGGGTCGTTGAATTCTTGATTGGCAAACACATCAAATTCAATTCCAAAGACGTGGTTGTTGGGGTTC
CTATTGAGCGTAAATTTGAGAAAACCCAGATTCTGGACAGAGCTAGTCCTTTCGATTCCCGCCACCGGGACGAAGATGAAAACGAGGCCATGACCGGGCAAAATGTCCTT
GTAGGGAGCCATGGCAAAGATGAAGGAGATGGAGAAGGGGTAAACACGAGAAGAATTGGGGTCCTTGGTGGGGATTTTGGATCGGTACAGAGCGACCACGGTCCTTGGTG
GGGATTTTGGGGTCCTTGGTGGTTAATATAA
Protein sequenceShow/hide protein sequence
MPDDQNPRNRCEETKDEEMLTVTRAMNHFDLVIGSFGRTNESKPVVIKLSLNEKLVLNLVALYQLPGGAREPHKHFVDENFRKIDRDIKQWPPRPSHPRRRHGDVHEKIG
IVDPNLVIFAAIKLESIERIPSTTAAVRPKPNLFGGVRGQRIKVDSHMIVVGVVEFLIGKHIKFNSKDVVVGVPIERKFEKTQILDRASPFDSRHRDEDENEAMTGQNVL
VGSHGKDEGDGEGVNTRRIGVLGGDFGSVQSDHGPWWGFWGPWWLI