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MS025492 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025492
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold13:1383826..1384080
RNA-Seq ExpressionMS025492
SyntenyMS025492
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574868.1 CLAVATA3/ESR (CLE)-related protein TDIF, partial [Cucurbita argyrosperma subsp. sororia]1.2e-0956.41Show/hide
Query:  TKSLASFFLFLLLLPFVVAVPYRISSPPGSATATPDPRHASISLAMAERSLYNRRRSLQQFEAAMHEVPSGPNPTSNK
        TKS A FFLFLL+L  ++AVPYR S+ P S  +T +P     S AMAE++         QFEA+MHEVPSGPNPTSNK
Subjt:  TKSLASFFLFLLLLPFVVAVPYRISSPPGSATATPDPRHASISLAMAERSLYNRRRSLQQFEAAMHEVPSGPNPTSNK

KAG6593788.1 hypothetical protein SDJN03_13264, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1157.65Show/hide
Query:  TISPTKSLASFFLFLLLLPFVVAVPYRISSPPGSATATPDPRHASISLAMAER---SLYNRRRSLQQFEAAMHEVPSGPNPTSNK
        +++ TKS A FFLFLLLL      PY  S+ P SA+A+   R  S SLAM E+   S Y+ +R+LQQFEAAMHEVPSGPNPT+NK
Subjt:  TISPTKSLASFFLFLLLLPFVVAVPYRISSPPGSATATPDPRHASISLAMAER---SLYNRRRSLQQFEAAMHEVPSGPNPTSNK

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACAATTTCTCCTACCAAATCTCTAGCTTCCTTCTTCCTCTTTCTCCTCCTCCTCCCCTTCGTCGTCGCCGTTCCTTATCGCATCTCGAGCCCCCCGGGCTCGGC
CACGGCGACTCCCGATCCTCGTCATGCTTCGATTTCTTTGGCCATGGCAGAAAGAAGTCTCTATAATAGGAGGAGATCATTGCAGCAATTTGAAGCAGCTATGCATGAAG
TTCCTAGTGGTCCAAATCCCACATCCAACAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACAATTTCTCCTACCAAATCTCTAGCTTCCTTCTTCCTCTTTCTCCTCCTCCTCCCCTTCGTCGTCGCCGTTCCTTATCGCATCTCGAGCCCCCCGGGCTCGGC
CACGGCGACTCCCGATCCTCGTCATGCTTCGATTTCTTTGGCCATGGCAGAAAGAAGTCTCTATAATAGGAGGAGATCATTGCAGCAATTTGAAGCAGCTATGCATGAAG
TTCCTAGTGGTCCAAATCCCACATCCAACAAGTAA
Protein sequenceShow/hide protein sequence
MATISPTKSLASFFLFLLLLPFVVAVPYRISSPPGSATATPDPRHASISLAMAERSLYNRRRSLQQFEAAMHEVPSGPNPTSNK