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MS025665 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025665
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description18.5 kDa class I heat shock protein-like
Genome locationscaffold446:100110..101423
RNA-Seq ExpressionMS025665
SyntenyMS025665
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAE1275008.1 unnamed protein product [Sepia pharaonis]5.6e-1223.33Show/hide
Query:  GYRSPYLSHAKRALYHLSYIPKQVTFMVNKNNGDAGYRSPYLSHAKRALYHLSYIPKQVTFMVNKNNGDAGYRSPYLSHAKRALYHLSYIPIHVKKFKRY
        G+ S  L H    L H++Y+P  +T++    +   G+ S  L H    L H++Y+P  +T++        GY S  L H    L H++Y+P H+     +
Subjt:  GYRSPYLSHAKRALYHLSYIPKQVTFMVNKNNGDAGYRSPYLSHAKRALYHLSYIPKQVTFMVNKNNGDAGYRSPYLSHAKRALYHLSYIPIHVKKFKRY

Query:  RSPYLSHAKRALYHLSYIPKQVTFMVNKNNGDAGYRSPYLSHAKRALYHLSYIPKQVTFMVNKNNGDAGYRSPYLSHAKRALYHLSYIPIHVKKFKNGLF
         +    +    L H+SY+P  + ++        G+ +    H      ++SY+P  +++++   +   G+ +  L H      H++Y+P HV      + 
Subjt:  RSPYLSHAKRALYHLSYIPKQVTFMVNKNNGDAGYRSPYLSHAKRALYHLSYIPKQVTFMVNKNNGDAGYRSPYLSHAKRALYHLSYIPIHVKKFKNGLF

Query:  YYEIKEYVIY
        Y  +  Y+ Y
Subjt:  YYEIKEYVIY

KCW65018.1 hypothetical protein EUGRSUZ_G02553 [Eucalyptus grandis]3.9e-0576.47Show/hide
Query:  NKNNGDAGYRSPYLSHAKRALYHLSYIPKQVTFM
        N+ +GDAGYRSPYLSHAKRALYHLSYIP  +T +
Subjt:  NKNNGDAGYRSPYLSHAKRALYHLSYIPKQVTFM

MBA0824263.1 hypothetical protein [Gossypium armourianum]6.6e-0560Show/hide
Query:  LSYIPK---QVTFMVNKNN-------GDAGYRSPYLSHAKRALYHLSYIP
        L ++P    Q+   +NKN+       GDAGYRSPYLSHAKRALYHLSYIP
Subjt:  LSYIPK---QVTFMVNKNN-------GDAGYRSPYLSHAKRALYHLSYIP

RDX82150.1 hypothetical protein CR513_37093, partial [Mucuna pruriens]1.3e-1650Show/hide
Query:  GDAGYRSPYLSHAKRALYHLSYIPKQVTFMVNKNNGDAGYRSPYLSHAKRALYHLSYIPKQVTFMVNKNNGDAGYRSPYLSHAKRALYHLSYIPIHVKKF
        GDAGYRSPYLSHAKRALYHLSYIP                   Y SH    L + SYI    TF+ +     AGYRSPYLSHAKRALYHLSYIP      
Subjt:  GDAGYRSPYLSHAKRALYHLSYIPKQVTFMVNKNNGDAGYRSPYLSHAKRALYHLSYIPKQVTFMVNKNNGDAGYRSPYLSHAKRALYHLSYIPIHVKKF

Query:  KRYRSPYLSHAKRALYHLSYIPKQVTFM
              Y SH    L + SYI    TF+
Subjt:  KRYRSPYLSHAKRALYHLSYIPKQVTFM

RZC78010.1 hypothetical protein C5167_002221 [Papaver somniferum]5.1e-0570.27Show/hide
Query:  KNNGDAGYRSPYLSHAKRALYHLSYIPKQVTFMVNKN
        K +GD GYRSPYLSHAKRALYHLSYIP   T++  K+
Subjt:  KNNGDAGYRSPYLSHAKRALYHLSYIPKQVTFMVNKN

TrEMBL top hitse value%identityAlignment
A0A059BFY8 Uncharacterized protein1.9e-0576.47Show/hide
Query:  NKNNGDAGYRSPYLSHAKRALYHLSYIPKQVTFM
        N+ +GDAGYRSPYLSHAKRALYHLSYIP  +T +
Subjt:  NKNNGDAGYRSPYLSHAKRALYHLSYIPKQVTFM

A0A371FVG4 Uncharacterized protein (Fragment)6.2e-1750Show/hide
Query:  GDAGYRSPYLSHAKRALYHLSYIPKQVTFMVNKNNGDAGYRSPYLSHAKRALYHLSYIPKQVTFMVNKNNGDAGYRSPYLSHAKRALYHLSYIPIHVKKF
        GDAGYRSPYLSHAKRALYHLSYIP                   Y SH    L + SYI    TF+ +     AGYRSPYLSHAKRALYHLSYIP      
Subjt:  GDAGYRSPYLSHAKRALYHLSYIPKQVTFMVNKNNGDAGYRSPYLSHAKRALYHLSYIPKQVTFMVNKNNGDAGYRSPYLSHAKRALYHLSYIPIHVKKF

Query:  KRYRSPYLSHAKRALYHLSYIPKQVTFM
              Y SH    L + SYI    TF+
Subjt:  KRYRSPYLSHAKRALYHLSYIPKQVTFM

A0A4Y7L040 Uncharacterized protein2.4e-0570.27Show/hide
Query:  KNNGDAGYRSPYLSHAKRALYHLSYIPKQVTFMVNKN
        K +GD GYRSPYLSHAKRALYHLSYIP   T++  K+
Subjt:  KNNGDAGYRSPYLSHAKRALYHLSYIPKQVTFMVNKN

A0A7J9IQW9 Uncharacterized protein3.2e-0560Show/hide
Query:  LSYIPK---QVTFMVNKNN-------GDAGYRSPYLSHAKRALYHLSYIP
        L ++P    Q+   +NKN+       GDAGYRSPYLSHAKRALYHLSYIP
Subjt:  LSYIPK---QVTFMVNKNN-------GDAGYRSPYLSHAKRALYHLSYIP

G7IRE1 Uncharacterized protein4.2e-0589.29Show/hide
Query:  GDAGYRSPYLSHAKRALYHLSYIPIHVK
        GDAGYRSPYLSHAKRALYHLSYIPI+++
Subjt:  GDAGYRSPYLSHAKRALYHLSYIPIHVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAATAAAAATAATGGAGATGCAGGGTATCGATCCCCGTACCTCTCACATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCAAACAGGTTACTTTCATGGT
GAATAAAAATAATGGAGATGCAGGGTATCGATCCCCGTACCTCTCACATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCAAACAGGTTACTTTCATGGTGAATA
AAAATAATGGAGATGCAGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCATACATGTTAAAAAATTTAAGAGGTATCGA
TCCCCGTACCTCTCACATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCAAACAGGTTACTTTCATGGTGAATAAAAATAATGGAGATGCAGGGTATCGATCCCC
GTACCTCTCACATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCAAACAGGTTACTTTCATGGTGAATAAAAATAATGGAGATGCAGGGTATCGATCCCCGTACC
TCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCATACATGTTAAAAAATTTAAGAATGGGTTATTCTATTATGAAATTAAAGAGTACGTTATTTATCCC
CGTACCTCTCACATGCTAAGCGAACGCTCTACCATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAATAAAAATAATGGAGATGCAGGGTATCGATCCCCGTACCTCTCACATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCAAACAGGTTACTTTCATGGT
GAATAAAAATAATGGAGATGCAGGGTATCGATCCCCGTACCTCTCACATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCAAACAGGTTACTTTCATGGTGAATA
AAAATAATGGAGATGCAGGGTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCATACATGTTAAAAAATTTAAGAGGTATCGA
TCCCCGTACCTCTCACATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCAAACAGGTTACTTTCATGGTGAATAAAAATAATGGAGATGCAGGGTATCGATCCCC
GTACCTCTCACATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCAAACAGGTTACTTTCATGGTGAATAAAAATAATGGAGATGCAGGGTATCGATCCCCGTACC
TCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCATACATGTTAAAAAATTTAAGAATGGGTTATTCTATTATGAAATTAAAGAGTACGTTATTTATCCC
CGTACCTCTCACATGCTAAGCGAACGCTCTACCATCTGA
Protein sequenceShow/hide protein sequence
MVNKNNGDAGYRSPYLSHAKRALYHLSYIPKQVTFMVNKNNGDAGYRSPYLSHAKRALYHLSYIPKQVTFMVNKNNGDAGYRSPYLSHAKRALYHLSYIPIHVKKFKRYR
SPYLSHAKRALYHLSYIPKQVTFMVNKNNGDAGYRSPYLSHAKRALYHLSYIPKQVTFMVNKNNGDAGYRSPYLSHAKRALYHLSYIPIHVKKFKNGLFYYEIKEYVIYP
RTSHMLSERSTI