; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS025674 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025674
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold399:174403..174669
RNA-Seq ExpressionMS025674
SyntenyMS025674
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]1.0e-1444.32Show/hide
Query:  MYWRQWSKDDWLLKGDRNTKWFHLRASQRKKANRIWGLYGESGNWCSREEDVERIASYYFTQIFLSSNPSSQDMGPILDSISPKLSEE
        +YW+Q S+ DWL +GD+NTK+FH +AS R++ N+IWG+  + GNW    E +E     +F Q+F SSNPS   +   L  + PK+S+E
Subjt:  MYWRQWSKDDWLLKGDRNTKWFHLRASQRKKANRIWGLYGESGNWCSREEDVERIASYYFTQIFLSSNPSSQDMGPILDSISPKLSEE

XP_012831565.1 PREDICTED: uncharacterized protein LOC105952547 [Erythranthe guttata]2.0e-1550Show/hide
Query:  MYWRQWSKDDWLLKGDRNTKWFHLRASQRKKANRIWGLYGESGNWCSREEDVERIASYYFTQIFLSSNPSSQDMGPILDSISPKLSEE
        MYWRQ SK  W+  GDRNTK+FH RA+ RKK NR+  +  + GNW S E  +ER+   YF  IF SSNPS  +M  IL+   P++  E
Subjt:  MYWRQWSKDDWLLKGDRNTKWFHLRASQRKKANRIWGLYGESGNWCSREEDVERIASYYFTQIFLSSNPSSQDMGPILDSISPKLSEE

XP_015382608.1 uncharacterized protein LOC107175577 [Citrus sinensis]1.7e-1748.86Show/hide
Query:  MYWRQWSKDDWLLKGDRNTKWFHLRASQRKKANRIWGLYGESGNWCSREEDVERIASYYFTQIFLSSNPSSQDMGPILDSISPKLSEE
        +YW+Q S+ DWL +GD+NTK+FH +AS RKK NRIWG+   SG+W  R +DVE     YFT++F ++ PS   M  +L  I+P++SE+
Subjt:  MYWRQWSKDDWLLKGDRNTKWFHLRASQRKKANRIWGLYGESGNWCSREEDVERIASYYFTQIFLSSNPSSQDMGPILDSISPKLSEE

XP_024033484.1 uncharacterized protein LOC112095607 [Citrus clementina]1.6e-1545.35Show/hide
Query:  YWRQWSKDDWLLKGDRNTKWFHLRASQRKKANRIWGLYGESGNWCSREEDVERIASYYFTQIFLSSNPSSQDMGPILDSISPKLSE
        +W+Q S+ +WL  GD+NTK+FH +AS RKK NRIWG+   SG+W  + E+VE     YF ++F +S PS +++   L+ I+P++SE
Subjt:  YWRQWSKDDWLLKGDRNTKWFHLRASQRKKANRIWGLYGESGNWCSREEDVERIASYYFTQIFLSSNPSSQDMGPILDSISPKLSE

XP_024038343.1 uncharacterized protein LOC112097373 [Citrus clementina]1.3e-1446.59Show/hide
Query:  MYWRQWSKDDWLLKGDRNTKWFHLRASQRKKANRIWGLYGESGNWCSREEDVERIASYYFTQIFLSSNPSSQDMGPILDSISPKLSEE
        +YW+Q S+ DWL  GD+NTK+FH +AS RKK NRIWG+   +GNW    E VE   + YFT +F +S P+   +   L  IS ++S E
Subjt:  MYWRQWSKDDWLLKGDRNTKWFHLRASQRKKANRIWGLYGESGNWCSREEDVERIASYYFTQIFLSSNPSSQDMGPILDSISPKLSEE

TrEMBL top hitse value%identityAlignment
A0A2N9GC56 Reverse transcriptase domain-containing protein5.8e-1645.35Show/hide
Query:  WRQWSKDDWLLKGDRNTKWFHLRASQRKKANRIWGLYGESGNWCSREEDVERIASYYFTQIFLSSNPSSQDMGPILDSISPKLSEE
        WRQ S+  WL +GDRNTK+FH+RA+QRK+ N + GL+  +G W + ++D+ ++   YF  IF +S+P+  +M  +LD +SPK++EE
Subjt:  WRQWSKDDWLLKGDRNTKWFHLRASQRKKANRIWGLYGESGNWCSREEDVERIASYYFTQIFLSSNPSSQDMGPILDSISPKLSEE

A0A2N9HAL6 Reverse transcriptase domain-containing protein8.4e-1544.19Show/hide
Query:  WRQWSKDDWLLKGDRNTKWFHLRASQRKKANRIWGLYGESGNWCSREEDVERIASYYFTQIFLSSNPSSQDMGPILDSISPKLSEE
        WRQ S+  WL +GDRNTK+FH RA+ RK  N I G+  ++G W +++ D+ ++A  YF  IF +SNP+ +D+  +L+ I+P ++EE
Subjt:  WRQWSKDDWLLKGDRNTKWFHLRASQRKKANRIWGLYGESGNWCSREEDVERIASYYFTQIFLSSNPSSQDMGPILDSISPKLSEE

A0A2P5AEV8 Endonuclease/exonuclease/phosphatase (Fragment)9.3e-1444.05Show/hide
Query:  YWRQWSKDDWLLKGDRNTKWFHLRASQRKKANRIWGLYGESGNWCSREEDVERIASYYFTQIFLSSNPSSQDMGPILDSISPKL
        YWRQ  + DWL  GD NTK+FH +A  RKK N I G+  E+G WC+  ED+ R+   YF+ IF + +PS ++M  +   I P++
Subjt:  YWRQWSKDDWLLKGDRNTKWFHLRASQRKKANRIWGLYGESGNWCSREEDVERIASYYFTQIFLSSNPSSQDMGPILDSISPKL

A0A6P6U810 uncharacterized protein LOC1137084774.6e-1344.05Show/hide
Query:  WRQWSKDDWLLKGDRNTKWFHLRASQRKKANRIWGLYGESGNWCSREEDVERIASYYFTQIFLSSNPSSQDMGPILDSISPKLS
        W+Q SK  W  +GDRNT +FH +AS+R+K N+I GL+ ++G WC+  +D+E I   +F  IF SS PS + +  +L  + PK+S
Subjt:  WRQWSKDDWLLKGDRNTKWFHLRASQRKKANRIWGLYGESGNWCSREEDVERIASYYFTQIFLSSNPSSQDMGPILDSISPKLS

A0A803P9R9 Uncharacterized protein2.7e-1342.05Show/hide
Query:  MYWRQWSKDDWLLKGDRNTKWFHLRASQRKKANRIWGLYGESGNWCSREEDVERIASYYFTQIFLSSNPSSQDMGPILDSISPKLSEE
        + W+Q S+  WL  GDRNTK+FH +ASQRKK N+I GL+ ++  WC++EE++E I  + +T++F SS P+   M  +   +S ++S +
Subjt:  MYWRQWSKDDWLLKGDRNTKWFHLRASQRKKANRIWGLYGESGNWCSREEDVERIASYYFTQIFLSSNPSSQDMGPILDSISPKLSEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACTGGAGACAATGGTCCAAGGATGATTGGTTACTGAAGGGCGACAGGAACACAAAGTGGTTTCATCTGAGAGCCAGTCAGAGGAAGAAGGCTAATAGAATATGGGG
GTTGTACGGTGAGTCAGGCAACTGGTGCAGTCGGGAGGAGGATGTTGAGAGGATTGCCTCTTATTATTTCACTCAGATCTTTTTGTCGAGCAATCCTAGTTCCCAAGATA
TGGGCCCAATTCTAGACTCCATCTCGCCAAAGCTATCGGAGGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTACTGGAGACAATGGTCCAAGGATGATTGGTTACTGAAGGGCGACAGGAACACAAAGTGGTTTCATCTGAGAGCCAGTCAGAGGAAGAAGGCTAATAGAATATGGGG
GTTGTACGGTGAGTCAGGCAACTGGTGCAGTCGGGAGGAGGATGTTGAGAGGATTGCCTCTTATTATTTCACTCAGATCTTTTTGTCGAGCAATCCTAGTTCCCAAGATA
TGGGCCCAATTCTAGACTCCATCTCGCCAAAGCTATCGGAGGAGTAG
Protein sequenceShow/hide protein sequence
MYWRQWSKDDWLLKGDRNTKWFHLRASQRKKANRIWGLYGESGNWCSREEDVERIASYYFTQIFLSSNPSSQDMGPILDSISPKLSEE