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MS025678 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025678
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold1036:209758..210261
RNA-Seq ExpressionMS025678
SyntenyMS025678
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648167.1 hypothetical protein Csa_018435 [Cucumis sativus]1.1e-4151.85Show/hide
Query:  LLLALLLVALSDISTVESKAPKRKKSSKPLQPKQGESVIVLRKFRVEIHNELNMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWE
        L L L+++ L+ + T  +K   + KS  P        V++  +F VEIHN+L MF+LDSHCYSKDDDLGLH+LFPDE+QDWSFKGNW  TT+FHCRLEWE
Subjt:  LLLALLLVALSDISTVESKAPKRKKSSKPLQPKQGESVIVLRKFRVEIHNELNMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWE

Query:  RGFVNFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDGIYLTRYDGELVFLLHWNVIR
         G++ FD+F + P+FV  YCG            CIW+ RQDG+YL    GE VF  +W +IR
Subjt:  RGFVNFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDGIYLTRYDGELVFLLHWNVIR

KAG6600848.1 S-protein-like 1, partial [Cucurbita argyrosperma subsp. sororia]5.0e-3951.83Show/hide
Query:  RRILLLALLLVALSDISTVESKAPKRKKSSKPLQPKQGESVIVLRKFRVEIHNELNMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRL
        RR+ LL LLL  L  +S   S A K+K  + P QP   +  I LRKF V I N L M+LLDSHC SKDDDLG+ V++PD++Q WSF+GNW G+TNFHC+L
Subjt:  RRILLLALLLVALSDISTVESKAPKRKKSSKPLQPKQGESVIVLRKFRVEIHNELNMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRL

Query:  EWERGFVNFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDGIYLTRYDGELVFLLHWNVI
        EW  GFV FDAF +D NFV  +CG          S C+W  +QDG+YL   +G+LVF  HW ++
Subjt:  EWERGFVNFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDGIYLTRYDGELVFLLHWNVI

KAG7031483.1 S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3852.15Show/hide
Query:  RRILLLALLLVALSDISTVESKAPKRKKSSKPLQPKQGESVIVLRKFRVEIHNELNMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRL
        RR+ LL LLL  L  +S   S A K+K  + P QP   +  I LRKF V I N L M+LLDSHC SKDDDLG+ V++PD++Q WSF+GNW G+TNFHC+L
Subjt:  RRILLLALLLVALSDISTVESKAPKRKKSSKPLQPKQGESVIVLRKFRVEIHNELNMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRL

Query:  EWERGFVNFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDGIYLTRYDGELVFLLHWNV
        EW  GFV FDAF +D NFV  +CG          S C+W  +QDG+YL   +G+LVF  HW +
Subjt:  EWERGFVNFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDGIYLTRYDGELVFLLHWNV

XP_022942056.1 S-protein homolog 1-like [Cucurbita moschata]2.3e-3951.83Show/hide
Query:  RRILLLALLLVALSDISTVESKAPKRKKSSKPLQPKQGESVIVLRKFRVEIHNELNMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRL
        RR+ LL LLL  L  +S   S A K+K  + P QP   +  I LRKF V I N L M+LLDSHC SKDDDLG+ V++PD++Q WSF+GNW G+TNFHC+L
Subjt:  RRILLLALLLVALSDISTVESKAPKRKKSSKPLQPKQGESVIVLRKFRVEIHNELNMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRL

Query:  EWERGFVNFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDGIYLTRYDGELVFLLHWNVI
        EW  GFV FDAF +D NFV  +CG          S C+W  +QDG+YL   +G+LVF  HW ++
Subjt:  EWERGFVNFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDGIYLTRYDGELVFLLHWNVI

XP_023546843.1 S-protein homolog 1-like [Cucurbita pepo subsp. pepo]1.8e-4152.44Show/hide
Query:  RRILLLALLLVALSDISTVESKAPKRKKSSKPLQPKQGESVIVLRKFRVEIHNELNMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRL
        RR+ LL LLL+ L  +S   S A K+K  + P QP   +  I LRKF V I N L M+LLDSHC SKDDDLG+HV++PD++Q WSF+GNW G+TNFHC+L
Subjt:  RRILLLALLLVALSDISTVESKAPKRKKSSKPLQPKQGESVIVLRKFRVEIHNELNMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRL

Query:  EWERGFVNFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDGIYLTRYDGELVFLLHWNVI
        EW  GFV FDAF +D NFV  +CG          S C+W  +QDG+YL   +G+LVF  HW ++
Subjt:  EWERGFVNFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDGIYLTRYDGELVFLLHWNVI

TrEMBL top hitse value%identityAlignment
A0A0A0KIQ4 S-protein homolog5.8e-3359.17Show/hide
Query:  LLLALLLVALSDISTVESKAPKRKKSSKPLQPKQGESVIVLRKFRVEIHNELNMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWE
        LLL LLL+   ++S  + K  K  K+ KP  P     ++   KFRVEIHN+LNM+LLDS CYSKDD+ GLHVLFPDEQQ+WSFKGNW  TT FHCRLEWE
Subjt:  LLLALLLVALSDISTVESKAPKRKKSSKPLQPKQGESVIVLRKFRVEIHNELNMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWE

Query:  RGFVNFDAFYNDPNFVVYYC
         G++ FD+F +DP FV  +C
Subjt:  RGFVNFDAFYNDPNFVVYYC

A0A0A0KL79 S-protein homolog1.3e-4054.48Show/hide
Query:  SKAPKRKKSSKPLQPKQGESVIVLRKFRVEIHNELNMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWERGFVNFDAFYNDPNFVV
        +K   + KS  P        V++  +F VEIHN+L MF+LDSHCYSKDDDLGLH+LFPDE+QDWSFKGNW  TT+FHCRLEWE G++ FD+F + P+FV 
Subjt:  SKAPKRKKSSKPLQPKQGESVIVLRKFRVEIHNELNMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWERGFVNFDAFYNDPNFVV

Query:  YYCGVDPIDESSDVSVCIWNIRQDGIYLTRYDGELVFLLHWNVIR
         YCG            CIW+ RQDG+YL    GE VF  +W +IR
Subjt:  YYCGVDPIDESSDVSVCIWNIRQDGIYLTRYDGELVFLLHWNVIR

A0A1S3BUQ9 S-protein homolog1.3e-3750.71Show/hide
Query:  RKKSSKPLQPKQGESVIVLRKFRVEIHNELNMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWERGFVNFDAFYNDPNFVVYYCGV
        + + + P  PK  E ++   KF + I+NEL M+LLDSHCYSKDDDLG  VL+P+++Q WSF+GNW GTTNFHC+LEWE G++ FDAF ND  F+  +C  
Subjt:  RKKSSKPLQPKQGESVIVLRKFRVEIHNELNMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWERGFVNFDAFYNDPNFVVYYCGV

Query:  DPIDESSDVSVCIWNIRQDGIYLTRYDGELVFLLHWNVIR
                 S C W+ RQDG+YLT  +G++VF  +W +IR
Subjt:  DPIDESSDVSVCIWNIRQDGIYLTRYDGELVFLLHWNVIR

A0A6J1F5H5 S-protein homolog3.5e-3849.42Show/hide
Query:  MNRRILLLALLLVALSDISTV-----ESKAPKRKKSSKPLQPKQGESVIVLRKFRVEIHNELNMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGT
        M R +LLL L+L+A S  S +      +K PK KK +KP   K         +F VEIHN+L MF+LD+HC SKDDDLGLH+LFPDE+QDWSF  NW GT
Subjt:  MNRRILLLALLLVALSDISTV-----ESKAPKRKKSSKPLQPKQGESVIVLRKFRVEIHNELNMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGT

Query:  TNFHCRLEWERGFVNFDAFY-NDPNFVVYYCGVDPIDESSDVSVCIWNIRQDGIYLTRYDGELVFLLHWNVI
        T FHCRLEW+ G + FDAF+ N  N ++ YC           + CIW+ RQDG+YL   D +LVF  +W+++
Subjt:  TNFHCRLEWERGFVNFDAFY-NDPNFVVYYCGVDPIDESSDVSVCIWNIRQDGIYLTRYDGELVFLLHWNVI

A0A6J1FMU2 S-protein homolog1.1e-3951.83Show/hide
Query:  RRILLLALLLVALSDISTVESKAPKRKKSSKPLQPKQGESVIVLRKFRVEIHNELNMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRL
        RR+ LL LLL  L  +S   S A K+K  + P QP   +  I LRKF V I N L M+LLDSHC SKDDDLG+ V++PD++Q WSF+GNW G+TNFHC+L
Subjt:  RRILLLALLLVALSDISTVESKAPKRKKSSKPLQPKQGESVIVLRKFRVEIHNELNMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRL

Query:  EWERGFVNFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDGIYLTRYDGELVFLLHWNVI
        EW  GFV FDAF +D NFV  +CG          S C+W  +QDG+YL   +G+LVF  HW ++
Subjt:  EWERGFVNFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDGIYLTRYDGELVFLLHWNVI

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 61.0e-0532Show/hide
Query:  RVEIHNELNMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWERGFVNFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDGIY
        RV I+N+ N +LL  HC S+DDD G H+L       W F  N+  +T + C    E+             F +Y      + +SS    C W  ++DGIY
Subjt:  RVEIHNELNMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWERGFVNFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDGIY

F4JLQ5 S-protein homolog 21.9e-0931.16Show/hide
Query:  LLVALSDISTVESKAPKRKKSSKPLQPKQGESVIVLRKFRVEIHNEL-NMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWERGFV
        L + +  I+T  S+A  +     P  P    SV    K  VEI+N+L N   L  HC SKDDDLG   L P E   +SF   + G T + C   W     
Subjt:  LLVALSDISTVESKAPKRKKSSKPLQPKQGESVIVLRKFRVEIHNEL-NMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWERGFV

Query:  NFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDG
        +FD + +  +           D   +   C+W IR++G
Subjt:  NFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDG

F4JLS0 S-protein homolog 15.8e-0632.35Show/hide
Query:  HCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWERGFVNFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDGIYL-TRYDGELVFLLHW
        HC SK+DDLG   L    +  W+F  N   +T F C +  + G +N + F++D   + + CG            CIW  + DG+YL     GE V    W
Subjt:  HCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWERGFVNFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDGIYL-TRYDGELVFLLHW

Query:  NV
         V
Subjt:  NV

Q40975 Self-incompatibility protein S11.3e-0529.41Show/hide
Query:  HCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWERGFVNFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDGIY
        HC SKD+DL    +       +SF+ ++  TT+F+C L+W++          +  F  Y       D+    S C+W I  DG+Y
Subjt:  HCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWERGFVNFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDGIY

Q9FMQ4 S-protein homolog 33.4e-0633.67Show/hide
Query:  VEIHNELNMFL-LDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWERGFVNFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDG
        V I N L   L L+ HC S DDDLGL +L P+    + F+ +  GTT F+C   W      FD + +D          D +        CIW+I   G
Subjt:  VEIHNELNMFL-LDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWERGFVNFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDG

Arabidopsis top hitse value%identityAlignment
AT1G26797.1 Plant self-incompatibility protein S1 family1.1e-0733Show/hide
Query:  HCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWERGFVNFDAFYNDPNFVVYYCGVDPIDESSDV-SVCIWNIRQDGIYLTRYDGELVFLLHW
        HC +K +DLGLH +   EQ D+ F+ N   TT + C+  W      FD F  D +        D    +S +   CIW I + G    R DG   F   W
Subjt:  HCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWERGFVNFDAFYNDPNFVVYYCGVDPIDESSDV-SVCIWNIRQDGIYLTRYDGELVFLLHW

AT1G26798.1 Plant self-incompatibility protein S1 family1.7e-0834Show/hide
Query:  HCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWERGFVNFDAFYND-PNFVVYYCGVDPIDESSDVSVCIWNIRQDGIYLTRYDGELVFLLHW
        HC +K  DLG+H L P EQ D+ F+ N   TT + C   W      FD F  D  +     CG+           CIW I + G    R DG   F   W
Subjt:  HCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWERGFVNFDAFYND-PNFVVYYCGVDPIDESSDVSVCIWNIRQDGIYLTRYDGELVFLLHW

AT2G06090.1 Plant self-incompatibility protein S1 family7.6e-0933.94Show/hide
Query:  NMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWERG---FVNFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDGIYLTRYD
        N  +L  HC SKDDDLG+H +    + ++ F+ +  G T F C L    G    V F A+   P FV           +S   + IW+   DGIYLT  D
Subjt:  NMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWERG---FVNFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDGIYLTRYD

Query:  GELVFLLHW
         + V +  W
Subjt:  GELVFLLHW

AT4G16195.1 Plant self-incompatibility protein S1 family1.4e-1031.16Show/hide
Query:  LLVALSDISTVESKAPKRKKSSKPLQPKQGESVIVLRKFRVEIHNEL-NMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWERGFV
        L + +  I+T  S+A  +     P  P    SV    K  VEI+N+L N   L  HC SKDDDLG   L P E   +SF   + G T + C   W     
Subjt:  LLVALSDISTVESKAPKRKKSSKPLQPKQGESVIVLRKFRVEIHNEL-NMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWERGFV

Query:  NFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDG
        +FD + +  +           D   +   C+W IR++G
Subjt:  NFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDG

AT5G12060.1 Plant self-incompatibility protein S1 family2.4e-0733.67Show/hide
Query:  VEIHNELNMFL-LDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWERGFVNFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDG
        V I N L   L L+ HC S DDDLGL +L P+    + F+ +  GTT F+C   W      FD + +D          D +        CIW+I   G
Subjt:  VEIHNELNMFL-LDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWERGFVNFDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCGACGTATATTATTGCTAGCGCTCTTGCTGGTCGCGCTCTCCGACATATCAACGGTTGAAAGCAAGGCCCCTAAAAGGAAAAAATCATCAAAGCCTCTCCAACC
GAAACAAGGTGAATCCGTTATTGTCTTGCGAAAGTTCCGCGTGGAGATTCACAACGAGTTGAATATGTTTTTGTTGGACAGTCATTGCTACTCGAAAGACGACGATTTGG
GGTTGCACGTGTTGTTCCCCGACGAGCAACAAGATTGGTCATTCAAAGGAAATTGGGCTGGGACAACAAATTTTCATTGTAGATTGGAGTGGGAAAGAGGGTTTGTAAAT
TTTGATGCGTTTTATAATGATCCTAACTTCGTGGTTTACTACTGTGGCGTAGACCCAATCGACGAGTCAAGCGATGTCTCAGTTTGTATTTGGAACATCAGACAAGATGG
AATTTATTTGACTAGATATGATGGTGAACTTGTTTTTCTCCTACACTGGAATGTGATTAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATCGACGTATATTATTGCTAGCGCTCTTGCTGGTCGCGCTCTCCGACATATCAACGGTTGAAAGCAAGGCCCCTAAAAGGAAAAAATCATCAAAGCCTCTCCAACC
GAAACAAGGTGAATCCGTTATTGTCTTGCGAAAGTTCCGCGTGGAGATTCACAACGAGTTGAATATGTTTTTGTTGGACAGTCATTGCTACTCGAAAGACGACGATTTGG
GGTTGCACGTGTTGTTCCCCGACGAGCAACAAGATTGGTCATTCAAAGGAAATTGGGCTGGGACAACAAATTTTCATTGTAGATTGGAGTGGGAAAGAGGGTTTGTAAAT
TTTGATGCGTTTTATAATGATCCTAACTTCGTGGTTTACTACTGTGGCGTAGACCCAATCGACGAGTCAAGCGATGTCTCAGTTTGTATTTGGAACATCAGACAAGATGG
AATTTATTTGACTAGATATGATGGTGAACTTGTTTTTCTCCTACACTGGAATGTGATTAGGTAA
Protein sequenceShow/hide protein sequence
MNRRILLLALLLVALSDISTVESKAPKRKKSSKPLQPKQGESVIVLRKFRVEIHNELNMFLLDSHCYSKDDDLGLHVLFPDEQQDWSFKGNWAGTTNFHCRLEWERGFVN
FDAFYNDPNFVVYYCGVDPIDESSDVSVCIWNIRQDGIYLTRYDGELVFLLHWNVIR