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MS025682 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025682
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold687:115249..116621
RNA-Seq ExpressionMS025682
SyntenyMS025682
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143616.1 uncharacterized protein LOC111013476 [Momordica charantia]2.5e-0939.69Show/hide
Query:  EKMVALVEQAKEEGRELSEEDAMEIALGKRSSYTKGMGYGPKPPSKKASAG-CSQEYVLTLEARVARN-EELLRSQREELLEAQRFQAEQQAMSTQDLLD
        E+M+ L      +G E +EE+ ME  LGKRS+Y  GMGYGPKP   K S+   S EYV +LEAR+ ++ EE+ R+ +E++               Q  L+
Subjt:  EKMVALVEQAKEEGRELSEEDAMEIALGKRSSYTKGMGYGPKPPSKKASAG-CSQEYVLTLEARVARN-EELLRSQREELLEAQRFQAEQQAMSTQDLLD

Query:  MQRHEYERRFSQMEEILNSFRGGGGSSSLSK
         Q  E+ R+  +M+++   F  GGGSSS SK
Subjt:  MQRHEYERRFSQMEEILNSFRGGGGSSSLSK

XP_022148911.1 uncharacterized protein LOC111017461 [Momordica charantia]8.5e-1040.15Show/hide
Query:  EKMVALVEQAKEEGRELSEEDAMEIALGKRSSYTKGMGYGPKPPSKKASAG-CSQEYVLTLEARVARN-EELLRSQREELLEAQRFQAEQQAMSTQDLLD
        E+M+ L      +G E +EE+ ME  LGKRS+Y  GMGYGPKP   K S+   S EYV +LEAR+ ++ EE+ R+ +E++               Q  L+
Subjt:  EKMVALVEQAKEEGRELSEEDAMEIALGKRSSYTKGMGYGPKPPSKKASAG-CSQEYVLTLEARVARN-EELLRSQREELLEAQRFQAEQQAMSTQDLLD

Query:  MQRHEYERRFSQMEEILNSFRGGGGSSSLSKV
         Q  E+ R+  +M+++   F  GGGSSS SKV
Subjt:  MQRHEYERRFSQMEEILNSFRGGGGSSSLSKV

XP_038895319.1 uncharacterized protein LOC120083572 isoform X1 [Benincasa hispida]2.3e-0742.05Show/hide
Query:  EPGVRRESRGVVLDKLIAPDGGNPIPISWIAEAGKPIGYLANLFNSEIGCLIRWNVPLEIKKNKDISDNVYNEIIQHLLEKMVALVEQ
        E  VR  SRGV L+K  A  G   I ++W    GKPIG +A+LFN EIG L+R  +PL+ +K KDI + +Y+ + + LL +    + Q
Subjt:  EPGVRRESRGVVLDKLIAPDGGNPIPISWIAEAGKPIGYLANLFNSEIGCLIRWNVPLEIKKNKDISDNVYNEIIQHLLEKMVALVEQ

XP_038895320.1 uncharacterized protein LOC120083572 isoform X2 [Benincasa hispida]2.3e-0742.05Show/hide
Query:  EPGVRRESRGVVLDKLIAPDGGNPIPISWIAEAGKPIGYLANLFNSEIGCLIRWNVPLEIKKNKDISDNVYNEIIQHLLEKMVALVEQ
        E  VR  SRGV L+K  A  G   I ++W    GKPIG +A+LFN EIG L+R  +PL+ +K KDI + +Y+ + + LL +    + Q
Subjt:  EPGVRRESRGVVLDKLIAPDGGNPIPISWIAEAGKPIGYLANLFNSEIGCLIRWNVPLEIKKNKDISDNVYNEIIQHLLEKMVALVEQ

XP_038895321.1 uncharacterized protein LOC120083572 isoform X3 [Benincasa hispida]2.3e-0742.05Show/hide
Query:  EPGVRRESRGVVLDKLIAPDGGNPIPISWIAEAGKPIGYLANLFNSEIGCLIRWNVPLEIKKNKDISDNVYNEIIQHLLEKMVALVEQ
        E  VR  SRGV L+K  A  G   I ++W    GKPIG +A+LFN EIG L+R  +PL+ +K KDI + +Y+ + + LL +    + Q
Subjt:  EPGVRRESRGVVLDKLIAPDGGNPIPISWIAEAGKPIGYLANLFNSEIGCLIRWNVPLEIKKNKDISDNVYNEIIQHLLEKMVALVEQ

TrEMBL top hitse value%identityAlignment
A0A438D9A4 Uncharacterized protein2.0e-0433.33Show/hide
Query:  ADGEPGVRRESRGVVLDKLIAPDGGNPIPISWIAEAGKPIGYLANLFNSEIGCLIRWNVPLEIKKNKDISDNVYNEIIQHL
        A  +  VR ++RGV+LDKLI  +GG P+PI+     GK  G      ++EIG  +R + P+ ++K K +     N ++  +
Subjt:  ADGEPGVRRESRGVVLDKLIAPDGGNPIPISWIAEAGKPIGYLANLFNSEIGCLIRWNVPLEIKKNKDISDNVYNEIIQHL

A0A438D9A4 Uncharacterized protein1.7e-0334.92Show/hide
Query:  EKMVALVEQAKEEGR-ELSEEDAMEIALGKRSSYTKGMGYGPKPPSKKASAGCSQEYVLTLEARVARNEELLRSQREELLEAQRFQAEQQAMSTQDLLDM
        EKM+ L  Q   EG   ++E +  E  LG++S Y KG+G+GPKP S   S   S E  + LE R+   + L+ +Q+++ LE Q+ + +Q     + L+  
Subjt:  EKMVALVEQAKEEGR-ELSEEDAMEIALGKRSSYTKGMGYGPKPPSKKASAGCSQEYVLTLEARVARNEELLRSQREELLEAQRFQAEQQAMSTQDLLDM

Query:  QRHEYERRFSQMEEILNSFRGGGGSS
        Q  ++ ++F   EEIL   R   GSS
Subjt:  QRHEYERRFSQMEEILNSFRGGGGSS

A0A438I7V1 Uncharacterized protein2.5e-0725.27Show/hide
Query:  ADGEPGVRRESRGVVLDKLIAPDGGNPIPISWIAEAGKPIGYLANLFNSEIGCLIRWNVPLEIKK-----------------------------------
        A  +  VR ++RGV+LDKLI  +GG P+PI+     GK  G      ++EIG  +R + P+ ++K                                   
Subjt:  ADGEPGVRRESRGVVLDKLIAPDGGNPIPISWIAEAGKPIGYLANLFNSEIGCLIRWNVPLEIKK-----------------------------------

Query:  ------NKDISDNVYN---EIIQH-----------------------------------LLEKMVALVEQAKEEGR-ELSEEDAMEIALGKRSSYTKGMG
               K +SD   N   ++ +H                                     EKM+ L  Q   EG   ++E +  E  LG++S Y KG+G
Subjt:  ------NKDISDNVYN---EIIQH-----------------------------------LLEKMVALVEQAKEEGR-ELSEEDAMEIALGKRSSYTKGMG

Query:  YGPKPPSKKASAGCSQEYVLTLEARVARNEELLRSQREELLEAQRFQAEQQAMSTQDLLDMQRHEYERRFSQMEEIL
        +GPKP S   S   S E  + LE R+   + L+ +Q+++ LE Q+ + +Q     + L+  Q  ++ ++F   EEIL
Subjt:  YGPKPPSKKASAGCSQEYVLTLEARVARNEELLRSQREELLEAQRFQAEQQAMSTQDLLDMQRHEYERRFSQMEEIL

A0A438KK91 Uncharacterized protein2.0e-0433.33Show/hide
Query:  ADGEPGVRRESRGVVLDKLIAPDGGNPIPISWIAEAGKPIGYLANLFNSEIGCLIRWNVPLEIKKNKDISDNVYNEIIQHL
        A  +  VR ++RGV+LDKLI  +GG P+PI+     GK  G      ++EIG  +R + P+ ++K K +     N ++  +
Subjt:  ADGEPGVRRESRGVVLDKLIAPDGGNPIPISWIAEAGKPIGYLANLFNSEIGCLIRWNVPLEIKKNKDISDNVYNEIIQHL

A0A6J1CQT5 uncharacterized protein LOC1110134761.2e-0939.69Show/hide
Query:  EKMVALVEQAKEEGRELSEEDAMEIALGKRSSYTKGMGYGPKPPSKKASAG-CSQEYVLTLEARVARN-EELLRSQREELLEAQRFQAEQQAMSTQDLLD
        E+M+ L      +G E +EE+ ME  LGKRS+Y  GMGYGPKP   K S+   S EYV +LEAR+ ++ EE+ R+ +E++               Q  L+
Subjt:  EKMVALVEQAKEEGRELSEEDAMEIALGKRSSYTKGMGYGPKPPSKKASAG-CSQEYVLTLEARVARN-EELLRSQREELLEAQRFQAEQQAMSTQDLLD

Query:  MQRHEYERRFSQMEEILNSFRGGGGSSSLSK
         Q  E+ R+  +M+++   F  GGGSSS SK
Subjt:  MQRHEYERRFSQMEEILNSFRGGGGSSSLSK

A0A6J1D6S9 uncharacterized protein LOC1110174614.1e-1040.15Show/hide
Query:  EKMVALVEQAKEEGRELSEEDAMEIALGKRSSYTKGMGYGPKPPSKKASAG-CSQEYVLTLEARVARN-EELLRSQREELLEAQRFQAEQQAMSTQDLLD
        E+M+ L      +G E +EE+ ME  LGKRS+Y  GMGYGPKP   K S+   S EYV +LEAR+ ++ EE+ R+ +E++               Q  L+
Subjt:  EKMVALVEQAKEEGRELSEEDAMEIALGKRSSYTKGMGYGPKPPSKKASAG-CSQEYVLTLEARVARN-EELLRSQREELLEAQRFQAEQQAMSTQDLLD

Query:  MQRHEYERRFSQMEEILNSFRGGGGSSSLSKV
         Q  E+ R+  +M+++   F  GGGSSS SKV
Subjt:  MQRHEYERRFSQMEEILNSFRGGGGSSSLSKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCAGATAGCGATGCTGATGGAGAACCAGGAGTTCGTAGAGAATCGCGAGGAGTGGTATTAGATAAGTTGATAGCTCCAGATGGAGGTAATCCGATACCAATTTC
ATGGATTGCAGAAGCAGGCAAACCTATTGGGTATCTAGCCAATCTATTCAATAGCGAAATTGGTTGTTTGATACGTTGGAATGTTCCTTTAGAAATAAAGAAGAATAAGG
ACATCTCAGACAATGTTTATAATGAAATTATTCAACATTTGTTGGAAAAAATGGTGGCATTAGTAGAACAGGCAAAAGAAGAAGGTCGAGAATTAAGTGAAGAAGATGCT
ATGGAAATAGCCCTCGGGAAAAGATCATCATACACTAAAGGGATGGGATATGGTCCGAAGCCACCCAGTAAAAAAGCGTCGGCAGGATGCTCACAAGAATACGTTCTGAC
ATTGGAGGCCAGAGTTGCAAGAAATGAAGAATTATTACGGAGCCAACGAGAGGAATTATTAGAAGCACAGCGTTTTCAGGCTGAACAACAAGCAATGTCAACACAAGACT
TACTTGATATGCAACGACATGAATATGAGAGAAGATTTAGCCAAATGGAAGAAATTCTCAATAGCTTTAGAGGAGGAGGAGGAAGTTCATCGTTGAGCAAGGTACGAACA
ATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCAGATAGCGATGCTGATGGAGAACCAGGAGTTCGTAGAGAATCGCGAGGAGTGGTATTAGATAAGTTGATAGCTCCAGATGGAGGTAATCCGATACCAATTTC
ATGGATTGCAGAAGCAGGCAAACCTATTGGGTATCTAGCCAATCTATTCAATAGCGAAATTGGTTGTTTGATACGTTGGAATGTTCCTTTAGAAATAAAGAAGAATAAGG
ACATCTCAGACAATGTTTATAATGAAATTATTCAACATTTGTTGGAAAAAATGGTGGCATTAGTAGAACAGGCAAAAGAAGAAGGTCGAGAATTAAGTGAAGAAGATGCT
ATGGAAATAGCCCTCGGGAAAAGATCATCATACACTAAAGGGATGGGATATGGTCCGAAGCCACCCAGTAAAAAAGCGTCGGCAGGATGCTCACAAGAATACGTTCTGAC
ATTGGAGGCCAGAGTTGCAAGAAATGAAGAATTATTACGGAGCCAACGAGAGGAATTATTAGAAGCACAGCGTTTTCAGGCTGAACAACAAGCAATGTCAACACAAGACT
TACTTGATATGCAACGACATGAATATGAGAGAAGATTTAGCCAAATGGAAGAAATTCTCAATAGCTTTAGAGGAGGAGGAGGAAGTTCATCGTTGAGCAAGGTACGAACA
ATTTGA
Protein sequenceShow/hide protein sequence
MPSDSDADGEPGVRRESRGVVLDKLIAPDGGNPIPISWIAEAGKPIGYLANLFNSEIGCLIRWNVPLEIKKNKDISDNVYNEIIQHLLEKMVALVEQAKEEGRELSEEDA
MEIALGKRSSYTKGMGYGPKPPSKKASAGCSQEYVLTLEARVARNEELLRSQREELLEAQRFQAEQQAMSTQDLLDMQRHEYERRFSQMEEILNSFRGGGGSSSLSKVRT
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