; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS025707 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025707
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionpentatricopeptide repeat-containing protein At5g04780
Genome locationscaffold220:256182..258310
RNA-Seq ExpressionMS025707
SyntenyMS025707
Gene Ontology termsGO:0005515 - protein binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016352.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]8.0e-11679.29Show/hide
Query:  MGFLHVRNFAANSGRNRERRLFLLLRVRLRTCQFSAASSFIVESGKGTSEDFYATHFSYVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILIN
        MGFLHV +FA NSG     ++F  L +R+   +F A+SS I+E  KGT+EDF +TH SYV ELLKLCAKRRL +QGKACHA+ILLMGLQ +TSTSNILIN
Subjt:  MGFLHVRNFAANSGRNRERRLFLLLRVRLRTCQFSAASSFIVESGKGTSEDFYATHFSYVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILIN

Query:  MYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALL
        MYSKCG VD AR+VFDEMP+R+LVSWSTMIGSLTQNGEENEALGLLLQM+REG PFSEFTISSVLCACAAKCAL ECQLLHAFA+KAAMNLNVFVATALL
Subjt:  MYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALL

Query:  DVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ
        DVYAKCGLMNDAA VFESM ERS VTWSSMAAGYVQN +YEEALALFRKA   GL+ DQF MSS++CACA LAAMIEGNQ
Subjt:  DVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ

XP_004140992.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial [Cucumis sativus]5.8e-11477Show/hide
Query:  MGFLHVRNFAANSGRNRE----RRLFLLLRVRLRTCQFSA---ASSFIVESGKGTSEDFYATHFSYVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTS
        MGFLHV +FA+NSGR RE    +R+F  L +R+ T QF A   +SS IVE  K T++DF ATH S+VHE+LKLCAKR+L +QGKACHAQILLMGL+ D  
Subjt:  MGFLHVRNFAANSGRNRE----RRLFLLLRVRLRTCQFSA---ASSFIVESGKGTSEDFYATHFSYVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTS

Query:  TSNILINMYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNV
        TSNILINMYSKCG VDFAR+VFDEMP+R+LVSW+TMIGSLTQNGEENEAL LLLQM+REG PFSEFTISSVLCACAAKCAL ECQLLHAFAIKAAM+LNV
Subjt:  TSNILINMYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNV

Query:  FVATALLDVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ
        FVATALLDVYAKCGLM DA  VFESMP+RS VTWSSMAAGYVQNE+YE+ALALFRKA   GL+ DQF MSS++CACA LAAMIEG Q
Subjt:  FVATALLDVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ

XP_022134327.1 pentatricopeptide repeat-containing protein At5g04780 [Momordica charantia]9.1e-15298.93Show/hide
Query:  MGFLHVRNFAANSGRNRERRLFLLLRVRLRTCQFSAASSFIVESGKGTSEDFYATHFSYVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILIN
        MGFLHVRNFAANSGRNRERRLFLLLRVRLRTCQFSAASSFIVESGKGTSEDFYATHFSYVHELLKLCA+RRLPIQGKACHAQILLMGLQKDTSTSNILIN
Subjt:  MGFLHVRNFAANSGRNRERRLFLLLRVRLRTCQFSAASSFIVESGKGTSEDFYATHFSYVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILIN

Query:  MYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALL
        MYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEEN+ALGLL+QMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALL
Subjt:  MYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALL

Query:  DVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ
        DVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ
Subjt:  DVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ

XP_022938551.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X1 [Cucurbita moschata]5.2e-11578.57Show/hide
Query:  MGFLHVRNFAANSGRNRERRLFLLLRVRLRTCQFSAASSFIVESGKGTSEDFYATHFSYVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILIN
        MGFLHV +FA NSG     ++F  L +R+   +F A+SS I+E  KGT+EDF +TH SYV ELLKLCAKRRL +QGKACHA+ILLMGLQ +TSTSNILIN
Subjt:  MGFLHVRNFAANSGRNRERRLFLLLRVRLRTCQFSAASSFIVESGKGTSEDFYATHFSYVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILIN

Query:  MYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALL
        MY+KCG VD AR+VFDEMP+R+LVSWSTMIGSLTQNGEENEALGL LQM+REG PFSEFTISSVLCACAAKCAL ECQLLHAFA+KAAMNLNVFVATALL
Subjt:  MYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALL

Query:  DVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ
        DVYAKCGLMNDAA VFESM ERS VTWSSMAAGYVQN +YEEALALFRKA   GL+ DQF MSS++CACA LAAMIEGNQ
Subjt:  DVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ

XP_023550933.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo]1.2e-11478.93Show/hide
Query:  MGFLHVRNFAANSGRNRERRLFLLLRVRLRTCQFSAASSFIVESGKGTSEDFYATHFSYVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILIN
        MGFLHV +FA NSG     ++F  L +R+   +F A+SS I+E  KGT+EDF  TH SYV ELLKLCAKRRL +QGKACHA+ILLMGLQ +T TSNILIN
Subjt:  MGFLHVRNFAANSGRNRERRLFLLLRVRLRTCQFSAASSFIVESGKGTSEDFYATHFSYVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILIN

Query:  MYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALL
        MYSKCG VD AR+VFDEMP+R+LVSWSTMIGSLTQNGEENEALGLLLQM+REG PFSEFTISSVLCACAAKCAL ECQLLHAFA+KAAMNLNVFVATALL
Subjt:  MYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALL

Query:  DVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ
        DVYAKCGLMNDAA VFESM ERS VTWSSMAAGYVQN +YEEALALFRKA   GL+ DQF MSS++CACA LAAMIEGNQ
Subjt:  DVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ

TrEMBL top hitse value%identityAlignment
A0A1S3C4B6 pentatricopeptide repeat-containing protein At5g047804.0e-11375.95Show/hide
Query:  MGFLHVRNFAANSGRNRE--------RRLFLLLRVRLRTCQF---SAASSFIVESGKGTSEDFYATHFSYVHELLKLCAKRRLPIQGKACHAQILLMGLQ
        MGFLHV +FA+NSGR RE        + +F  L +RL T QF   S+ SS IVE  K TS+DF ATH SYVHE+LKLCAKR+L +QGKACHAQILLMGL+
Subjt:  MGFLHVRNFAANSGRNRE--------RRLFLLLRVRLRTCQF---SAASSFIVESGKGTSEDFYATHFSYVHELLKLCAKRRLPIQGKACHAQILLMGLQ

Query:  KDTSTSNILINMYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAM
         D  TSNILIN YSKCG VD AR+VFDEMP+R+LVSW+TMIGSLTQNG+ENEALGLLLQM+REG PFSEFTISSVLCACAAKCAL ECQLLHAF IKAAM
Subjt:  KDTSTSNILINMYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAM

Query:  NLNVFVATALLDVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ
        +LNVFVATALLDVYAKCGLM DA  VFESMP+RS VTWSSMAAGYVQNE+YEEALALFRKA   GL+ DQF MSS++CACA LAAMIEG Q
Subjt:  NLNVFVATALLDVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ

A0A6J1BZB9 pentatricopeptide repeat-containing protein At5g047804.4e-15298.93Show/hide
Query:  MGFLHVRNFAANSGRNRERRLFLLLRVRLRTCQFSAASSFIVESGKGTSEDFYATHFSYVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILIN
        MGFLHVRNFAANSGRNRERRLFLLLRVRLRTCQFSAASSFIVESGKGTSEDFYATHFSYVHELLKLCA+RRLPIQGKACHAQILLMGLQKDTSTSNILIN
Subjt:  MGFLHVRNFAANSGRNRERRLFLLLRVRLRTCQFSAASSFIVESGKGTSEDFYATHFSYVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILIN

Query:  MYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALL
        MYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEEN+ALGLL+QMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALL
Subjt:  MYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALL

Query:  DVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ
        DVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ
Subjt:  DVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ

A0A6J1FDG7 pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X12.5e-11578.57Show/hide
Query:  MGFLHVRNFAANSGRNRERRLFLLLRVRLRTCQFSAASSFIVESGKGTSEDFYATHFSYVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILIN
        MGFLHV +FA NSG     ++F  L +R+   +F A+SS I+E  KGT+EDF +TH SYV ELLKLCAKRRL +QGKACHA+ILLMGLQ +TSTSNILIN
Subjt:  MGFLHVRNFAANSGRNRERRLFLLLRVRLRTCQFSAASSFIVESGKGTSEDFYATHFSYVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILIN

Query:  MYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALL
        MY+KCG VD AR+VFDEMP+R+LVSWSTMIGSLTQNGEENEALGL LQM+REG PFSEFTISSVLCACAAKCAL ECQLLHAFA+KAAMNLNVFVATALL
Subjt:  MYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALL

Query:  DVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ
        DVYAKCGLMNDAA VFESM ERS VTWSSMAAGYVQN +YEEALALFRKA   GL+ DQF MSS++CACA LAAMIEGNQ
Subjt:  DVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ

A0A6J1FED4 pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X21.2e-9368.93Show/hide
Query:  MGFLHVRNFAANSGRNRERRLFLLLRVRLRTCQFSAASSFIVESGKGTSEDFYATHFSYVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILIN
        MGFLHV +FA NSG     ++F  L +R+   +F A+SS I+E  KGT+EDF +TH SYV ELLKLCAKRRL +Q                         
Subjt:  MGFLHVRNFAANSGRNRERRLFLLLRVRLRTCQFSAASSFIVESGKGTSEDFYATHFSYVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILIN

Query:  MYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALL
               VD AR+VFDEMP+R+LVSWSTMIGSLTQNGEENEALGL LQM+REG PFSEFTISSVLCACAAKCAL ECQLLHAFA+KAAMNLNVFVATALL
Subjt:  MYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALL

Query:  DVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ
        DVYAKCGLMNDAA VFESM ERS VTWSSMAAGYVQN +YEEALALFRKA   GL+ DQF MSS++CACA LAAMIEGNQ
Subjt:  DVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ

A0A6J1JWF9 pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X16.2e-11478.21Show/hide
Query:  MGFLHVRNFAANSGRNRERRLFLLLRVRLRTCQFSAASSFIVESGKGTSEDFYATHFSYVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILIN
        MGFLHV +FA NSG     ++F  L +R+   +F A+SS I+E  KGT+EDF +TH SYV ELLKLCAKRRL +QGKACHA+ILLMGLQ +T TSNILIN
Subjt:  MGFLHVRNFAANSGRNRERRLFLLLRVRLRTCQFSAASSFIVESGKGTSEDFYATHFSYVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILIN

Query:  MYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALL
        MYSKCG VD AR+VFDEMP+R+LVSW+TMIGSLTQNGEENEAL LLLQM+R G PFSEFTISSVLCACAAKCAL ECQLLHAFAIKAAMNLNVFVATALL
Subjt:  MYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALL

Query:  DVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ
        DVYAKCGLMNDAA VFESM ERS VTWSSMAAGYVQN +YEEALALFRKA   GL+ DQF MSS++CACA LAAMIEGNQ
Subjt:  DVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ

SwissProt top hitse value%identityAlignment
P0C898 Putative pentatricopeptide repeat-containing protein At3g151303.0e-3337.73Show/hide
Query:  LLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILINMYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEFTIS
        +L++C ++ L  QG   H  +L  G   +  TSN LI+MY KC     A KVFD MP RN+VSWS ++     NG+   +L L  +M R+GI  +EFT S
Subjt:  LLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILINMYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEFTIS

Query:  SVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQ--GIGLRQDQF
        + L AC    AL +   +H F +K    + V V  +L+D+Y+KCG +N+A +VF  + +RS ++W++M AG+V      +AL  F   Q   I  R D+F
Subjt:  SVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQ--GIGLRQDQF

Query:  FMSSLVCACARLAAMIEGNQ
         ++SL+ AC+    +  G Q
Subjt:  FMSSLVCACARLAAMIEGNQ

P93005 Pentatricopeptide repeat-containing protein At2g336801.2e-3436.93Show/hide
Query:  FIVESGKGTSEDFYATHFSYVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILINMYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEE
        F+ E  +G+  D+  T       +L   A       G+  H   +  GL    + SN L+ MYSKC  ++ A K+FD   +RN ++WS M+   +QNGE 
Subjt:  FIVESGKGTSEDFYATHFSYVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILINMYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEE

Query:  NEALGLLLQMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNEL
         EA+ L  +M   GI  SE+TI  VL AC+  C L E + LH+F +K     ++F  TAL+D+YAK G + DA + F+ + ER    W+S+ +GYVQN  
Subjt:  NEALGLLLQMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNEL

Query:  YEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ
         EEAL L+R+ +  G+  +   M+S++ AC+ LA +  G Q
Subjt:  YEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ

Q0WNP3 Pentatricopeptide repeat-containing protein At4g18520, chloroplastic2.3e-3336.67Show/hide
Query:  VHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILINMYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEF
        V  +L+ C      + GK  HAQI+   ++K+    + L+ +Y KCG    A  V  ++P+R++VSW+ MI   +  G E+EAL  L +M +EG+  + F
Subjt:  VHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILINMYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEF

Query:  TISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQ
        T SS L ACA   +L   + +H+ A K     NVFV +AL+ +YAKCG +++A RVF+SMPE++ V+W +M  GY +N    EAL L  + +  G   D 
Subjt:  TISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQ

Query:  FFMSSLVCAC
        +  ++++  C
Subjt:  FFMSSLVCAC

Q9LIQ7 Pentatricopeptide repeat-containing protein At3g24000, mitochondrial2.5e-3539.09Show/hide
Query:  YVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILINMYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSE
        + + LLK C   +L IQG+  HA IL    + D    N L+NMY+KCG ++ ARKVF++MP R+ V+W+T+I   +Q+    +AL    QM R G   +E
Subjt:  YVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILINMYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSE

Query:  FTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQD
        FT+SSV+ A AA+        LH F +K   + NV V +ALLD+Y + GLM+DA  VF+++  R+ V+W+++ AG+ +    E+AL LF+     G R  
Subjt:  FTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQD

Query:  QFFMSSLVCACARLAAMIEG
         F  +SL  AC+    + +G
Subjt:  QFFMSSLVCACARLAAMIEG

Q9LZ19 Pentatricopeptide repeat-containing protein At5g04780, mitochondrial1.5e-6954.18Show/hide
Query:  YATHFS---YVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILINMYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQM
        Y+  FS    VHE+L+LCA+    ++ KACH +I+ + L+ D +  N+LIN YSKCG V+ AR+VFD M  R+LVSW+TMIG  T+N  E+EAL + L+M
Subjt:  YATHFS---YVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILINMYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQM

Query:  KREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRK
        + EG  FSEFTISSVL AC   C   EC+ LH  ++K  ++LN++V TALLD+YAKCG++ DA +VFESM ++S+VTWSSM AGYVQN+ YEEAL L+R+
Subjt:  KREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRK

Query:  AQGIGLRQDQFFMSSLVCACARLAAMIEGNQFVKRASAVKS-FGSLEFKLS
        AQ + L Q+QF +SS++CAC+ LAA+IEG Q    A   KS FGS  F  S
Subjt:  AQGIGLRQDQFFMSSLVCACARLAAMIEGNQFVKRASAVKS-FGSLEFKLS

Arabidopsis top hitse value%identityAlignment
AT2G33680.1 Tetratricopeptide repeat (TPR)-like superfamily protein8.8e-3636.93Show/hide
Query:  FIVESGKGTSEDFYATHFSYVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILINMYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEE
        F+ E  +G+  D+  T       +L   A       G+  H   +  GL    + SN L+ MYSKC  ++ A K+FD   +RN ++WS M+   +QNGE 
Subjt:  FIVESGKGTSEDFYATHFSYVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILINMYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEE

Query:  NEALGLLLQMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNEL
         EA+ L  +M   GI  SE+TI  VL AC+  C L E + LH+F +K     ++F  TAL+D+YAK G + DA + F+ + ER    W+S+ +GYVQN  
Subjt:  NEALGLLLQMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNEL

Query:  YEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ
         EEAL L+R+ +  G+  +   M+S++ AC+ LA +  G Q
Subjt:  YEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQ

AT3G15130.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.2e-3437.73Show/hide
Query:  LLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILINMYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEFTIS
        +L++C ++ L  QG   H  +L  G   +  TSN LI+MY KC     A KVFD MP RN+VSWS ++     NG+   +L L  +M R+GI  +EFT S
Subjt:  LLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILINMYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEFTIS

Query:  SVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQ--GIGLRQDQF
        + L AC    AL +   +H F +K    + V V  +L+D+Y+KCG +N+A +VF  + +RS ++W++M AG+V      +AL  F   Q   I  R D+F
Subjt:  SVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQ--GIGLRQDQF

Query:  FMSSLVCACARLAAMIEGNQ
         ++SL+ AC+    +  G Q
Subjt:  FMSSLVCACARLAAMIEGNQ

AT3G24000.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.8e-3639.09Show/hide
Query:  YVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILINMYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSE
        + + LLK C   +L IQG+  HA IL    + D    N L+NMY+KCG ++ ARKVF++MP R+ V+W+T+I   +Q+    +AL    QM R G   +E
Subjt:  YVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILINMYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSE

Query:  FTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQD
        FT+SSV+ A AA+        LH F +K   + NV V +ALLD+Y + GLM+DA  VF+++  R+ V+W+++ AG+ +    E+AL LF+     G R  
Subjt:  FTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQD

Query:  QFFMSSLVCACARLAAMIEG
         F  +SL  AC+    + +G
Subjt:  QFFMSSLVCACARLAAMIEG

AT4G18520.1 Pentatricopeptide repeat (PPR) superfamily protein1.7e-3436.67Show/hide
Query:  VHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILINMYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEF
        V  +L+ C      + GK  HAQI+   ++K+    + L+ +Y KCG    A  V  ++P+R++VSW+ MI   +  G E+EAL  L +M +EG+  + F
Subjt:  VHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILINMYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEF

Query:  TISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQ
        T SS L ACA   +L   + +H+ A K     NVFV +AL+ +YAKCG +++A RVF+SMPE++ V+W +M  GY +N    EAL L  + +  G   D 
Subjt:  TISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQ

Query:  FFMSSLVCAC
        +  ++++  C
Subjt:  FFMSSLVCAC

AT5G04780.1 Pentatricopeptide repeat (PPR) superfamily protein1.1e-7054.18Show/hide
Query:  YATHFS---YVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILINMYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQM
        Y+  FS    VHE+L+LCA+    ++ KACH +I+ + L+ D +  N+LIN YSKCG V+ AR+VFD M  R+LVSW+TMIG  T+N  E+EAL + L+M
Subjt:  YATHFS---YVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILINMYSKCGLVDFARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQM

Query:  KREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRK
        + EG  FSEFTISSVL AC   C   EC+ LH  ++K  ++LN++V TALLD+YAKCG++ DA +VFESM ++S+VTWSSM AGYVQN+ YEEAL L+R+
Subjt:  KREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQNELYEEALALFRK

Query:  AQGIGLRQDQFFMSSLVCACARLAAMIEGNQFVKRASAVKS-FGSLEFKLS
        AQ + L Q+QF +SS++CAC+ LAA+IEG Q    A   KS FGS  F  S
Subjt:  AQGIGLRQDQFFMSSLVCACARLAAMIEGNQFVKRASAVKS-FGSLEFKLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTTCTCCATGTTCGCAATTTCGCAGCAAATTCAGGAAGAAACAGAGAGAGGCGGCTCTTTTTACTTCTCAGAGTTCGTCTTCGCACCTGCCAATTTTCTGCAGC
ATCATCATTCATTGTTGAATCTGGGAAAGGAACCTCAGAGGATTTCTACGCTACCCATTTCTCGTATGTGCACGAGCTACTGAAATTATGTGCCAAAAGAAGATTGCCCA
TACAAGGGAAGGCTTGCCATGCCCAAATTCTGCTTATGGGGTTGCAGAAAGACACTTCAACGTCAAACATTCTTATCAACATGTACTCGAAATGTGGGTTAGTTGACTTT
GCCCGCAAGGTGTTTGATGAAATGCCCAACCGAAATTTGGTATCGTGGAGCACCATGATTGGGTCGCTTACACAGAACGGAGAGGAGAATGAGGCTCTTGGTCTTTTGCT
TCAGATGAAAAGAGAAGGAATCCCTTTTAGTGAGTTCACCATTTCGAGTGTTCTTTGTGCCTGTGCGGCAAAATGTGCTCTCTATGAATGCCAGCTGCTCCATGCCTTTG
CTATTAAGGCCGCGATGAATCTGAATGTTTTTGTTGCAACTGCATTGCTTGATGTTTATGCAAAATGTGGTTTGATGAACGATGCGGCTCGTGTTTTCGAGTCCATGCCT
GAGAGGAGTGCTGTCACGTGGAGTTCGATGGCGGCGGGGTACGTGCAGAATGAGCTATATGAGGAAGCTTTGGCATTGTTTCGCAAAGCTCAGGGAATCGGGTTGAGACA
GGACCAGTTTTTTATGTCATCTTTGGTTTGTGCTTGTGCTAGATTGGCAGCCATGATTGAAGGGAACCAGTTTGTCAAACGTGCAAGTGCAGTAAAAAGCTTTGGAAGTT
TAGAGTTTAAACTCTCTCTCCCTAATGTCAACCTCAATGCATTTGATCATCCAAACTCATCCTTGAAGATTGACCCCTGCCACCAGTTTCTTGCTCATAGCACGACGAAA
TTCTCAGATTGTGGTCCGACATGCTGCGTCGATGGCTCGATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTTCTCCATGTTCGCAATTTCGCAGCAAATTCAGGAAGAAACAGAGAGAGGCGGCTCTTTTTACTTCTCAGAGTTCGTCTTCGCACCTGCCAATTTTCTGCAGC
ATCATCATTCATTGTTGAATCTGGGAAAGGAACCTCAGAGGATTTCTACGCTACCCATTTCTCGTATGTGCACGAGCTACTGAAATTATGTGCCAAAAGAAGATTGCCCA
TACAAGGGAAGGCTTGCCATGCCCAAATTCTGCTTATGGGGTTGCAGAAAGACACTTCAACGTCAAACATTCTTATCAACATGTACTCGAAATGTGGGTTAGTTGACTTT
GCCCGCAAGGTGTTTGATGAAATGCCCAACCGAAATTTGGTATCGTGGAGCACCATGATTGGGTCGCTTACACAGAACGGAGAGGAGAATGAGGCTCTTGGTCTTTTGCT
TCAGATGAAAAGAGAAGGAATCCCTTTTAGTGAGTTCACCATTTCGAGTGTTCTTTGTGCCTGTGCGGCAAAATGTGCTCTCTATGAATGCCAGCTGCTCCATGCCTTTG
CTATTAAGGCCGCGATGAATCTGAATGTTTTTGTTGCAACTGCATTGCTTGATGTTTATGCAAAATGTGGTTTGATGAACGATGCGGCTCGTGTTTTCGAGTCCATGCCT
GAGAGGAGTGCTGTCACGTGGAGTTCGATGGCGGCGGGGTACGTGCAGAATGAGCTATATGAGGAAGCTTTGGCATTGTTTCGCAAAGCTCAGGGAATCGGGTTGAGACA
GGACCAGTTTTTTATGTCATCTTTGGTTTGTGCTTGTGCTAGATTGGCAGCCATGATTGAAGGGAACCAGTTTGTCAAACGTGCAAGTGCAGTAAAAAGCTTTGGAAGTT
TAGAGTTTAAACTCTCTCTCCCTAATGTCAACCTCAATGCATTTGATCATCCAAACTCATCCTTGAAGATTGACCCCTGCCACCAGTTTCTTGCTCATAGCACGACGAAA
TTCTCAGATTGTGGTCCGACATGCTGCGTCGATGGCTCGATATGA
Protein sequenceShow/hide protein sequence
MGFLHVRNFAANSGRNRERRLFLLLRVRLRTCQFSAASSFIVESGKGTSEDFYATHFSYVHELLKLCAKRRLPIQGKACHAQILLMGLQKDTSTSNILINMYSKCGLVDF
ARKVFDEMPNRNLVSWSTMIGSLTQNGEENEALGLLLQMKREGIPFSEFTISSVLCACAAKCALYECQLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAARVFESMP
ERSAVTWSSMAAGYVQNELYEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQFVKRASAVKSFGSLEFKLSLPNVNLNAFDHPNSSLKIDPCHQFLAHSTTK
FSDCGPTCCVDGSI