; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS025712 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025712
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMyb_DNA-bind_3 domain-containing protein
Genome locationscaffold220:406199..406723
RNA-Seq ExpressionMS025712
SyntenyMS025712
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140924.1 uncharacterized protein LOC101213668 [Cucumis sativus]1.8e-8493.68Show/hide
Query:  MYDELNIVCGNYQAPSRWAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA
        MYDELNIVCGNYQAPS+WAKMKDGNH LQVRNFEEESASFHSPSSEDLSETD+TESYTGP EYAELPNGSQ+PL NN  RQ PKRPRASEALQDAMLAVA
Subjt:  MYDELNIVCGNYQAPSRWAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA

Query:  SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK
        SSIRRLADAMELSKH+IDANELLEAVMEVDGLEEA+QMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK
Subjt:  SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK

XP_022134541.1 uncharacterized protein LOC111006759 [Momordica charantia]4.5e-9199.43Show/hide
Query:  MYDELNIVCGNYQAPSRWAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA
        MYDELNIVCGNYQAPS+WAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA
Subjt:  MYDELNIVCGNYQAPSRWAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA

Query:  SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK
        SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK
Subjt:  SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK

XP_022939736.1 uncharacterized protein LOC111445529 isoform X1 [Cucurbita moschata]8.3e-8593.68Show/hide
Query:  MYDELNIVCGNYQAPSRWAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA
        MYDELNIVCGNYQAPSRW KM+DGN PLQVRNF EESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQ+PL N+  RQHPKRPRASEALQDAMLAVA
Subjt:  MYDELNIVCGNYQAPSRWAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA

Query:  SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK
        SSIRRLADAMELSKH+IDANELLEAVMEVDGLEEA+QMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK
Subjt:  SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK

XP_023550438.1 uncharacterized protein LOC111808583 isoform X1 [Cucurbita pepo subsp. pepo]3.7e-8594.25Show/hide
Query:  MYDELNIVCGNYQAPSRWAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA
        MYDELNIVCGNYQAPSRW KMKDGN PLQVRNF EESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQ+PL N+  RQHPKRPRASEALQDAMLAVA
Subjt:  MYDELNIVCGNYQAPSRWAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA

Query:  SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK
        SSIRRLADAMELSKH+IDANELLEAVMEVDGLEEA+QMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK
Subjt:  SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK

XP_038885642.1 uncharacterized protein LOC120075957 [Benincasa hispida]2.6e-8695.4Show/hide
Query:  MYDELNIVCGNYQAPSRWAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA
        MYDELNIVCGNYQAPSRWAKMKDGNH LQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQ+PL NN  RQHPKRPRASEALQDAMLAVA
Subjt:  MYDELNIVCGNYQAPSRWAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA

Query:  SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK
        SSIRRLADAMELSKH+IDA ELLEAVMEVDGLEEA+QMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK
Subjt:  SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK

TrEMBL top hitse value%identityAlignment
A0A0A0K8L4 Myb_DNA-bind_3 domain-containing protein8.9e-8593.68Show/hide
Query:  MYDELNIVCGNYQAPSRWAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA
        MYDELNIVCGNYQAPS+WAKMKDGNH LQVRNFEEESASFHSPSSEDLSETD+TESYTGP EYAELPNGSQ+PL NN  RQ PKRPRASEALQDAMLAVA
Subjt:  MYDELNIVCGNYQAPSRWAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA

Query:  SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK
        SSIRRLADAMELSKH+IDANELLEAVMEVDGLEEA+QMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK
Subjt:  SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK

A0A1S3C4E4 uncharacterized protein LOC103496536 isoform X14.4e-8493.1Show/hide
Query:  MYDELNIVCGNYQAPSRWAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA
        MYDELNIVCGNYQAPS+WAKMKDGN  LQVRNFEEESASFHSPSSEDLSETD+TESYTGPSEYAELPNGSQ+PL NN  RQ PKRPR+SEALQDAMLAVA
Subjt:  MYDELNIVCGNYQAPSRWAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA

Query:  SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK
        SSIRRLADAMELSKH+IDANELLEAVMEVDGLEEA+QMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK
Subjt:  SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK

A0A6J1BY25 uncharacterized protein LOC1110067592.2e-9199.43Show/hide
Query:  MYDELNIVCGNYQAPSRWAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA
        MYDELNIVCGNYQAPS+WAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA
Subjt:  MYDELNIVCGNYQAPSRWAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA

Query:  SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK
        SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK
Subjt:  SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK

A0A6J1FGR7 uncharacterized protein LOC111445529 isoform X14.0e-8593.68Show/hide
Query:  MYDELNIVCGNYQAPSRWAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA
        MYDELNIVCGNYQAPSRW KM+DGN PLQVRNF EESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQ+PL N+  RQHPKRPRASEALQDAMLAVA
Subjt:  MYDELNIVCGNYQAPSRWAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA

Query:  SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK
        SSIRRLADAMELSKH+IDANELLEAVMEVDGLEEA+QMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK
Subjt:  SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK

A0A6J1JZW7 uncharacterized protein LOC111488942 isoform X18.9e-8593.1Show/hide
Query:  MYDELNIVCGNYQAPSRWAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA
        MYDELNIVCGNYQAPSRW KMKDGN PLQVRNF EESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQ+PL N+  RQHPKRPRASEALQDAMLAVA
Subjt:  MYDELNIVCGNYQAPSRWAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA

Query:  SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK
        SSIRRLADAMELSKH+IDANELLEAVME+DGLEEA+QMYAFEYLNA+PVKARAFLTYNARMRKIYLFRQFWWWK
Subjt:  SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02550.1 unknown protein5.6e-4758.52Show/hide
Query:  MYDELNIVCGNYQAPSRWAKMK--DGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLA
        MY+EL  VCG+YQ P ++ K+K    +H   V+ FEE+S SF   SSE+ S+TD TESY G SEY    +    P ++ L R+  KR R S+  Q+AML 
Subjt:  MYDELNIVCGNYQAPSRWAKMK--DGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLA

Query:  VASSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK
        VASSIRRLADA+  SK  I+  ELL+AVME+D LEEA+QMYAFEYLN DPVKARAF+ YN RMRK++LFRQFWWWK
Subjt:  VASSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK

AT4G02550.2 unknown protein5.6e-3953.45Show/hide
Query:  MYDELNIVCGNYQAPSRWAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA
        MY+EL  VCG+YQ P                            SSE+ S+TD TESY G SEY    +    P ++ L R+  KR R S+  Q+AML VA
Subjt:  MYDELNIVCGNYQAPSRWAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA

Query:  SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK
        SSIRRLADA+  SK  I+  ELL+AVME+D LEEA+QMYAFEYLN DPVKARAF+ YN RMRK++LFRQFWWWK
Subjt:  SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK

AT4G02550.3 unknown protein5.6e-4758.52Show/hide
Query:  MYDELNIVCGNYQAPSRWAKMK--DGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLA
        MY+EL  VCG+YQ P ++ K+K    +H   V+ FEE+S SF   SSE+ S+TD TESY G SEY    +    P ++ L R+  KR R S+  Q+AML 
Subjt:  MYDELNIVCGNYQAPSRWAKMK--DGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLA

Query:  VASSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK
        VASSIRRLADA+  SK  I+  ELL+AVME+D LEEA+QMYAFEYLN DPVKARAF+ YN RMRK++LFRQFWWWK
Subjt:  VASSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK

AT4G02550.4 unknown protein5.6e-3953.45Show/hide
Query:  MYDELNIVCGNYQAPSRWAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA
        MY+EL  VCG+YQ P                            SSE+ S+TD TESY G SEY    +    P ++ L R+  KR R S+  Q+AML VA
Subjt:  MYDELNIVCGNYQAPSRWAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVA

Query:  SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK
        SSIRRLADA+  SK  I+  ELL+AVME+D LEEA+QMYAFEYLN DPVKARAF+ YN RMRK++LFRQFWWWK
Subjt:  SSIRRLADAMELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGATGAACTGAACATTGTGTGTGGCAACTATCAGGCCCCGAGTCGATGGGCTAAGATGAAGGATGGAAACCATCCACTGCAGGTCAGGAATTTCGAAGAAGAGTC
TGCATCGTTTCACTCCCCTAGCTCTGAAGATCTTAGTGAAACAGATGATACAGAGTCATACACCGGACCATCTGAATATGCAGAACTACCCAATGGCAGTCAGGAACCTC
TGCAAAACAATCTACCGAGACAACATCCGAAGAGGCCAAGGGCATCTGAGGCTCTCCAGGATGCAATGCTGGCAGTGGCGTCCAGTATTCGTCGCCTGGCTGATGCAATG
GAACTAAGCAAACACACGATAGATGCCAACGAACTCTTAGAAGCCGTGATGGAGGTTGATGGTTTGGAGGAGGCCAGACAGATGTATGCCTTTGAATATTTAAATGCTGA
TCCGGTGAAAGCCCGAGCGTTCTTGACGTATAACGCTCGGATGAGGAAAATATATTTGTTTCGCCAGTTTTGGTGGTGGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATGATGAACTGAACATTGTGTGTGGCAACTATCAGGCCCCGAGTCGATGGGCTAAGATGAAGGATGGAAACCATCCACTGCAGGTCAGGAATTTCGAAGAAGAGTC
TGCATCGTTTCACTCCCCTAGCTCTGAAGATCTTAGTGAAACAGATGATACAGAGTCATACACCGGACCATCTGAATATGCAGAACTACCCAATGGCAGTCAGGAACCTC
TGCAAAACAATCTACCGAGACAACATCCGAAGAGGCCAAGGGCATCTGAGGCTCTCCAGGATGCAATGCTGGCAGTGGCGTCCAGTATTCGTCGCCTGGCTGATGCAATG
GAACTAAGCAAACACACGATAGATGCCAACGAACTCTTAGAAGCCGTGATGGAGGTTGATGGTTTGGAGGAGGCCAGACAGATGTATGCCTTTGAATATTTAAATGCTGA
TCCGGTGAAAGCCCGAGCGTTCTTGACGTATAACGCTCGGATGAGGAAAATATATTTGTTTCGCCAGTTTTGGTGGTGGAAGTGA
Protein sequenceShow/hide protein sequence
MYDELNIVCGNYQAPSRWAKMKDGNHPLQVRNFEEESASFHSPSSEDLSETDDTESYTGPSEYAELPNGSQEPLQNNLPRQHPKRPRASEALQDAMLAVASSIRRLADAM
ELSKHTIDANELLEAVMEVDGLEEARQMYAFEYLNADPVKARAFLTYNARMRKIYLFRQFWWWK