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MS025720 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025720
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProlamin_like domain-containing protein
Genome locationscaffold220:668545..668922
RNA-Seq ExpressionMS025720
SyntenyMS025720
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR008502 - Prolamin-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046835.1 hypothetical protein E6C27_scaffold216G001330 [Cucumis melo var. makuwa]7.3e-5173.6Show/hide
Query:  MRAVAVLLLATNLATLLQPSMSDDDYNSPIWNGWVDEDRGYNLRPCLDIMKNATCQVELYNYHFNISKKELDLNCCIFVKAMGKRCASNFASWYHFPGLE
        MRA+ +LL A NL+ L+Q S  D+DYNSPIW+GWVDEDRGY LRPCLD M++A CQVELYNY+FNISKKELDLNCC+FVK MGK+CA  F  WY FPGLE
Subjt:  MRAVAVLLLATNLATLLQPSMSDDDYNSPIWNGWVDEDRGYNLRPCLDIMKNATCQVELYNYHFNISKKELDLNCCIFVKAMGKRCASNFASWYHFPGLE

Query:  IYEPNPMKVYDNCARRLEALSPAPF
        IYEPNPMKVY+NC  RL+A  PAPF
Subjt:  IYEPNPMKVYDNCARRLEALSPAPF

KAA0046841.1 hypothetical protein E6C27_scaffold216G001410 [Cucumis melo var. makuwa]3.1e-4973.39Show/hide
Query:  VAVLLLATNLATLLQPSMS--DDDYNSPIWNGWVDEDRGYNLRPCLDIMKNATCQVELYNYHFNISKKELDLNCCIFVKAMGKRCASNFASWYHFPGLEI
        + +LLLA NLA L+ PSM+  DDDYNSPIWNGWVDEDR  NLRPCLD+MK+A CQV+LYNY+FNISKKELDL CC+FVK MGK CA  FA WY FPGLE+
Subjt:  VAVLLLATNLATLLQPSMS--DDDYNSPIWNGWVDEDRGYNLRPCLDIMKNATCQVELYNYHFNISKKELDLNCCIFVKAMGKRCASNFASWYHFPGLEI

Query:  YEPNPMKVYDNCARRLEALSPAPF
        YEPNPM VY+NC  RL+AL P PF
Subjt:  YEPNPMKVYDNCARRLEALSPAPF

KAE8646662.1 hypothetical protein Csa_004797, partial [Cucumis sativus]5.8e-4070.37Show/hide
Query:  MRAVAVLLLATNLATLLQPSMSDDDYNSPIWNGWVDEDRGYNLRPCLDIMKNATCQVELYNYHFNISKKELDLNCCIFVKAMGKRCASNFASWYHFPGLE
        MRA+ +LL   NLA L+QP   D+DYNS IWN W+DEDR + LRPCLD M++A CQVELYNY+FNISK+ELDLNCC+FVK MGK+CA  F  WY FPGLE
Subjt:  MRAVAVLLLATNLATLLQPSMSDDDYNSPIWNGWVDEDRGYNLRPCLDIMKNATCQVELYNYHFNISKKELDLNCCIFVKAMGKRCASNFASWYHFPGLE

Query:  IYEPNPMK
        IYEPNPMK
Subjt:  IYEPNPMK

KAG6575254.1 hypothetical protein SDJN03_25893, partial [Cucurbita argyrosperma subsp. sororia]2.4e-3857.14Show/hide
Query:  VAVLLLATNLATLLQPSMSDDDYNSPIWNGWVDEDRGYNLRPCLDIMKNATCQVELYNYHFNISKKELDLNCCIFVKAMGKRCASNFASWYHFPGLEIYE
        + VLLL  NL   ++ + +DDDYNSPIW+ W+DEDR Y LRPCL++MK+A CQV+LYN +FN+SK+ELDLNCC+F++ MGK+C  NFA W+++P  E+Y+
Subjt:  VAVLLLATNLATLLQPSMSDDDYNSPIWNGWVDEDRGYNLRPCLDIMKNATCQVELYNYHFNISKKELDLNCCIFVKAMGKRCASNFASWYHFPGLEIYE

Query:  PNPMKVYDNCARRLEALSP
        PNPMK+Y  C  RL +  P
Subjt:  PNPMKVYDNCARRLEALSP

KAG6578867.1 hypothetical protein SDJN03_23315, partial [Cucurbita argyrosperma subsp. sororia]8.1e-5073.6Show/hide
Query:  MRAVAVLLLATNLATLLQPSMSDDDYNSPIWNGWVDEDRGYNLRPCLDIMKNATCQVELYNYHFNISKKELDLNCCIFVKAMGKRCASNFASWYHFPGLE
        M A+ +LLLA NLA L QPS +DDDYNSPIW+ WVDEDRG NLRPCLD+MK+A CQVELYNY+FNISKKELDLNCC+FVK MGKRCA  FA W+ FP  E
Subjt:  MRAVAVLLLATNLATLLQPSMSDDDYNSPIWNGWVDEDRGYNLRPCLDIMKNATCQVELYNYHFNISKKELDLNCCIFVKAMGKRCASNFASWYHFPGLE

Query:  IYEPNPMKVYDNCARRLEALSPAPF
        ++E NPMKVY NC  RL+AL PAPF
Subjt:  IYEPNPMKVYDNCARRLEALSPAPF

TrEMBL top hitse value%identityAlignment
A0A0A0KEB8 Prolamin_like domain-containing protein1.8e-4770.97Show/hide
Query:  MRAVAVLLLATNLATLLQPSMSDDDYNSPIWNGWVDEDRGYNLRPCLDIMKNATCQVELYNYHFNISKKELDLNCCIFVKAMGKRCASNFASWYHFPGLE
        MRA+ +LL A NLA L+Q S  D+DYNS IWN W+DEDR + LRPCLD M++A CQVELYNY+FNISKKELDLNCC+FVK MGK+CA  F  WY FPGLE
Subjt:  MRAVAVLLLATNLATLLQPSMSDDDYNSPIWNGWVDEDRGYNLRPCLDIMKNATCQVELYNYHFNISKKELDLNCCIFVKAMGKRCASNFASWYHFPGLE

Query:  IYEPNPMKVYDNCARRLEALSPAP
        IYEPNPMKVY+NCA RL A  P P
Subjt:  IYEPNPMKVYDNCARRLEALSPAP

A0A0A0KQ41 Prolamin_like domain-containing protein6.7e-3455.37Show/hide
Query:  VAVLLLATNLATLLQPSMSDDDYNSPIWNGWVDEDRGYNLRPCLDIMKNATCQVELYNYHFNISKKELDLNCCIFVKAMGKRCASNFASWYHFPGLEIYE
        V + LL  +   L+QPS  DD+  S IW+ W+DEDR   L PCL +M++  CQVELYNY+FNISKKELDL+CC++V  MGK+CA+ F  W+ FP LE  +
Subjt:  VAVLLLATNLATLLQPSMSDDDYNSPIWNGWVDEDRGYNLRPCLDIMKNATCQVELYNYHFNISKKELDLNCCIFVKAMGKRCASNFASWYHFPGLEIYE

Query:  PNPMKVYDNCARRLEALSPAP
        PNPMKVY+NC +RL   +P P
Subjt:  PNPMKVYDNCARRLEALSPAP

A0A0A0L535 Prolamin_like domain-containing protein1.4e-2848.74Show/hide
Query:  VAVLLLATNLATLLQPSMSDDDYNSPIWNGWVDEDRGYNLRPCLDIMKNATCQVELYNYHFNISKKELDLNCCIFVKAMGKRCASNFASWYHFPGLEIYE
        V + LL  +   L+ PS+ DD+  S IW+GW+D+DR   L  CL +MK+  CQVELYNY+FN SKKE+DL+CC++V  +G+ CA++F SW+   G +  +
Subjt:  VAVLLLATNLATLLQPSMSDDDYNSPIWNGWVDEDRGYNLRPCLDIMKNATCQVELYNYHFNISKKELDLNCCIFVKAMGKRCASNFASWYHFPGLEIYE

Query:  PNPMKVYDNCARRLEALSP
        PNPMK+Y+NC +RL   +P
Subjt:  PNPMKVYDNCARRLEALSP

A0A5A7TZR1 Prolamin_like domain-containing protein1.5e-4973.39Show/hide
Query:  VAVLLLATNLATLLQPSMS--DDDYNSPIWNGWVDEDRGYNLRPCLDIMKNATCQVELYNYHFNISKKELDLNCCIFVKAMGKRCASNFASWYHFPGLEI
        + +LLLA NLA L+ PSM+  DDDYNSPIWNGWVDEDR  NLRPCLD+MK+A CQV+LYNY+FNISKKELDL CC+FVK MGK CA  FA WY FPGLE+
Subjt:  VAVLLLATNLATLLQPSMS--DDDYNSPIWNGWVDEDRGYNLRPCLDIMKNATCQVELYNYHFNISKKELDLNCCIFVKAMGKRCASNFASWYHFPGLEI

Query:  YEPNPMKVYDNCARRLEALSPAPF
        YEPNPM VY+NC  RL+AL P PF
Subjt:  YEPNPMKVYDNCARRLEALSPAPF

A0A5D3C280 Prolamin_like domain-containing protein3.5e-5173.6Show/hide
Query:  MRAVAVLLLATNLATLLQPSMSDDDYNSPIWNGWVDEDRGYNLRPCLDIMKNATCQVELYNYHFNISKKELDLNCCIFVKAMGKRCASNFASWYHFPGLE
        MRA+ +LL A NL+ L+Q S  D+DYNSPIW+GWVDEDRGY LRPCLD M++A CQVELYNY+FNISKKELDLNCC+FVK MGK+CA  F  WY FPGLE
Subjt:  MRAVAVLLLATNLATLLQPSMSDDDYNSPIWNGWVDEDRGYNLRPCLDIMKNATCQVELYNYHFNISKKELDLNCCIFVKAMGKRCASNFASWYHFPGLE

Query:  IYEPNPMKVYDNCARRLEALSPAPF
        IYEPNPMKVY+NC  RL+A  PAPF
Subjt:  IYEPNPMKVYDNCARRLEALSPAPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGCAGTGGCGGTTCTCTTATTGGCAACAAACTTGGCAACTTTACTTCAACCTTCAATGTCTGACGACGACTACAATTCACCAATATGGAATGGATGGGTTGATGA
GGATAGAGGATACAATCTAAGACCGTGTTTAGATATAATGAAGAATGCAACCTGTCAAGTGGAACTTTATAATTACCACTTCAATATAAGCAAGAAGGAATTGGATCTGA
ATTGTTGCATCTTCGTTAAAGCCATGGGGAAGAGATGTGCTTCTAATTTTGCTAGTTGGTACCATTTTCCTGGTTTGGAAATCTACGAGCCTAATCCTATGAAAGTTTAC
GACAATTGTGCTAGAAGGCTCGAAGCTCTTTCGCCCGCGCCATTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGCAGTGGCGGTTCTCTTATTGGCAACAAACTTGGCAACTTTACTTCAACCTTCAATGTCTGACGACGACTACAATTCACCAATATGGAATGGATGGGTTGATGA
GGATAGAGGATACAATCTAAGACCGTGTTTAGATATAATGAAGAATGCAACCTGTCAAGTGGAACTTTATAATTACCACTTCAATATAAGCAAGAAGGAATTGGATCTGA
ATTGTTGCATCTTCGTTAAAGCCATGGGGAAGAGATGTGCTTCTAATTTTGCTAGTTGGTACCATTTTCCTGGTTTGGAAATCTACGAGCCTAATCCTATGAAAGTTTAC
GACAATTGTGCTAGAAGGCTCGAAGCTCTTTCGCCCGCGCCATTCTAG
Protein sequenceShow/hide protein sequence
MRAVAVLLLATNLATLLQPSMSDDDYNSPIWNGWVDEDRGYNLRPCLDIMKNATCQVELYNYHFNISKKELDLNCCIFVKAMGKRCASNFASWYHFPGLEIYEPNPMKVY
DNCARRLEALSPAPF