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MS025721 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025721
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProlamin_like domain-containing protein
Genome locationscaffold220:670858..671226
RNA-Seq ExpressionMS025721
SyntenyMS025721
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR008502 - Prolamin-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046835.1 hypothetical protein E6C27_scaffold216G001330 [Cucumis melo var. makuwa]1.0e-5277.87Show/hide
Query:  MVVLLLATNLATFLQPSVADDDYNSPIWDGWVDEDRGYTLRPCLDIMKSAKCQVELYNYYFNISKKELDLDCCIFVKAMGKICASAFAGWYQFPGLEVYE
        +V+LL A NL+  +Q S  D+DYNSPIWDGWVDEDRGYTLRPCLD M+SAKCQVELYNYYFNISKKELDL+CC+FVK MGK CA AF  WYQFPGLE+YE
Subjt:  MVVLLLATNLATFLQPSVADDDYNSPIWDGWVDEDRGYTLRPCLDIMKSAKCQVELYNYYFNISKKELDLDCCIFVKAMGKICASAFAGWYQFPGLEVYE

Query:  PNPMKVYQNCARRVDALPPAPF
        PNPMKVY NC  R+DA PPAPF
Subjt:  PNPMKVYQNCARRVDALPPAPF

KAA0046841.1 hypothetical protein E6C27_scaffold216G001410 [Cucumis melo var. makuwa]5.5e-5175.81Show/hide
Query:  MVVLLLATNLATFLQPSVA--DDDYNSPIWDGWVDEDRGYTLRPCLDIMKSAKCQVELYNYYFNISKKELDLDCCIFVKAMGKICASAFAGWYQFPGLEV
        + +LLLA NLA  + PS+A  DDDYNSPIW+GWVDEDR   LRPCLD+MKSAKCQV+LYNYYFNISKKELDL CC+FVK MGK CA AFAGWY+FPGLEV
Subjt:  MVVLLLATNLATFLQPSVA--DDDYNSPIWDGWVDEDRGYTLRPCLDIMKSAKCQVELYNYYFNISKKELDLDCCIFVKAMGKICASAFAGWYQFPGLEV

Query:  YEPNPMKVYQNCARRVDALPPAPF
        YEPNPM VY NC  R+ ALPP PF
Subjt:  YEPNPMKVYQNCARRVDALPPAPF

KAG6575249.1 hypothetical protein SDJN03_25888, partial [Cucurbita argyrosperma subsp. sororia]6.7e-4165.83Show/hide
Query:  MVVLLLATNLATFLQPSVADDDYNSPIWDGWVDEDRGYTLRPCLDIMKSAKCQVELYNYYFNISKKELDLDCCIFVKAMGKICASAFAGWYQFPGLEVYE
        MVVLLLA NL  F++ + AD DYNSPIWD W+DEDR Y LRPCL++MKSAKCQV+LYN YFN+SK+ELDL+CC+FVK MGK CA  FAGW+ +P  EVY+
Subjt:  MVVLLLATNLATFLQPSVADDDYNSPIWDGWVDEDRGYTLRPCLDIMKSAKCQVELYNYYFNISKKELDLDCCIFVKAMGKICASAFAGWYQFPGLEVYE

Query:  PNPMKVYQNC-ARRVDALPP
        PNPM +Y+ C AR   ++PP
Subjt:  PNPMKVYQNC-ARRVDALPP

KAG6575254.1 hypothetical protein SDJN03_25893, partial [Cucurbita argyrosperma subsp. sororia]1.8e-4163.93Show/hide
Query:  MVVLLLATNLATFLQPSVADDDYNSPIWDGWVDEDRGYTLRPCLDIMKSAKCQVELYNYYFNISKKELDLDCCIFVKAMGKICASAFAGWYQFPGLEVYE
        MVVLLL  NL  F++ + ADDDYNSPIWD W+DEDR Y LRPCL++MKSAKCQV+LYN YFN+SK+ELDL+CC+F++ MGK C   FAGW+ +P  EVY+
Subjt:  MVVLLLATNLATFLQPSVADDDYNSPIWDGWVDEDRGYTLRPCLDIMKSAKCQVELYNYYFNISKKELDLDCCIFVKAMGKICASAFAGWYQFPGLEVYE

Query:  PNPMKVYQNC-ARRVDALPPAP
        PNPMK+Y+ C AR   ++PP P
Subjt:  PNPMKVYQNC-ARRVDALPPAP

KAG6578867.1 hypothetical protein SDJN03_23315, partial [Cucurbita argyrosperma subsp. sororia]1.0e-5279.51Show/hide
Query:  MVVLLLATNLATFLQPSVADDDYNSPIWDGWVDEDRGYTLRPCLDIMKSAKCQVELYNYYFNISKKELDLDCCIFVKAMGKICASAFAGWYQFPGLEVYE
        MV+LLLA NLA   QPS ADDDYNSPIWD WVDEDRG  LRPCLD+MKSAKCQVELYNYYFNISKKELDL+CC+FVK MGK CA AFAGW++FP  EV+E
Subjt:  MVVLLLATNLATFLQPSVADDDYNSPIWDGWVDEDRGYTLRPCLDIMKSAKCQVELYNYYFNISKKELDLDCCIFVKAMGKICASAFAGWYQFPGLEVYE

Query:  PNPMKVYQNCARRVDALPPAPF
         NPMKVY+NC  R+DALPPAPF
Subjt:  PNPMKVYQNCARRVDALPPAPF

TrEMBL top hitse value%identityAlignment
A0A0A0KEB8 Prolamin_like domain-containing protein1.6e-4873.55Show/hide
Query:  MVVLLLATNLATFLQPSVADDDYNSPIWDGWVDEDRGYTLRPCLDIMKSAKCQVELYNYYFNISKKELDLDCCIFVKAMGKICASAFAGWYQFPGLEVYE
        MV+LL A NLA  +Q S  D+DYNS IW+ W+DEDR +TLRPCLD M+SAKCQVELYNYYFNISKKELDL+CC+FVK MGK CA AF  WYQFPGLE+YE
Subjt:  MVVLLLATNLATFLQPSVADDDYNSPIWDGWVDEDRGYTLRPCLDIMKSAKCQVELYNYYFNISKKELDLDCCIFVKAMGKICASAFAGWYQFPGLEVYE

Query:  PNPMKVYQNCARRVDALPPAP
        PNPMKVY NCA R+ A PP P
Subjt:  PNPMKVYQNCARRVDALPPAP

A0A0A0KQ41 Prolamin_like domain-containing protein2.7e-3559.5Show/hide
Query:  MVVLLLATNLATFLQPSVADDDYNSPIWDGWVDEDRGYTLRPCLDIMKSAKCQVELYNYYFNISKKELDLDCCIFVKAMGKICASAFAGWYQFPGLEVYE
        M+ LL+  +LA  +QPS  DD+  S IW  W+DEDR  TL PCL +M+S KCQVELYNYYFNISKKELDL CC++V  MGK CA+AF  W+ FP LE  +
Subjt:  MVVLLLATNLATFLQPSVADDDYNSPIWDGWVDEDRGYTLRPCLDIMKSAKCQVELYNYYFNISKKELDLDCCIFVKAMGKICASAFAGWYQFPGLEVYE

Query:  PNPMKVYQNCARRVDALPPAP
        PNPMKVY NC +R+    P P
Subjt:  PNPMKVYQNCARRVDALPPAP

A0A0A0L535 Prolamin_like domain-containing protein6.3e-2951.24Show/hide
Query:  MVVLLLATNLATFLQPSVADDDYNSPIWDGWVDEDRGYTLRPCLDIMKSAKCQVELYNYYFNISKKELDLDCCIFVKAMGKICASAFAGWYQFPGLEVYE
        M+ LL+  +LA  + PS+ DD+  S IW GW+D+DR   L  CL +MKS KCQVELYNYYFN SKKE+DL CC++V  +G+ CA++F  W+   G +  +
Subjt:  MVVLLLATNLATFLQPSVADDDYNSPIWDGWVDEDRGYTLRPCLDIMKSAKCQVELYNYYFNISKKELDLDCCIFVKAMGKICASAFAGWYQFPGLEVYE

Query:  PNPMKVYQNCARRVDALPPAP
        PNPMK+Y NC +R+    PAP
Subjt:  PNPMKVYQNCARRVDALPPAP

A0A5A7TZR1 Prolamin_like domain-containing protein2.6e-5175.81Show/hide
Query:  MVVLLLATNLATFLQPSVA--DDDYNSPIWDGWVDEDRGYTLRPCLDIMKSAKCQVELYNYYFNISKKELDLDCCIFVKAMGKICASAFAGWYQFPGLEV
        + +LLLA NLA  + PS+A  DDDYNSPIW+GWVDEDR   LRPCLD+MKSAKCQV+LYNYYFNISKKELDL CC+FVK MGK CA AFAGWY+FPGLEV
Subjt:  MVVLLLATNLATFLQPSVA--DDDYNSPIWDGWVDEDRGYTLRPCLDIMKSAKCQVELYNYYFNISKKELDLDCCIFVKAMGKICASAFAGWYQFPGLEV

Query:  YEPNPMKVYQNCARRVDALPPAPF
        YEPNPM VY NC  R+ ALPP PF
Subjt:  YEPNPMKVYQNCARRVDALPPAPF

A0A5D3C280 Prolamin_like domain-containing protein4.8e-5377.87Show/hide
Query:  MVVLLLATNLATFLQPSVADDDYNSPIWDGWVDEDRGYTLRPCLDIMKSAKCQVELYNYYFNISKKELDLDCCIFVKAMGKICASAFAGWYQFPGLEVYE
        +V+LL A NL+  +Q S  D+DYNSPIWDGWVDEDRGYTLRPCLD M+SAKCQVELYNYYFNISKKELDL+CC+FVK MGK CA AF  WYQFPGLE+YE
Subjt:  MVVLLLATNLATFLQPSVADDDYNSPIWDGWVDEDRGYTLRPCLDIMKSAKCQVELYNYYFNISKKELDLDCCIFVKAMGKICASAFAGWYQFPGLEVYE

Query:  PNPMKVYQNCARRVDALPPAPF
        PNPMKVY NC  R+DA PPAPF
Subjt:  PNPMKVYQNCARRVDALPPAPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGTTCTCTTATTGGCAACAAACTTGGCAACTTTTCTTCAACCTTCAGTGGCAGACGACGACTACAATTCACCGATATGGGATGGATGGGTTGATGAAGATAGAGG
ATACACTCTAAGACCGTGTTTAGATATAATGAAGAGTGCAAAATGCCAGGTGGAACTTTATAATTATTACTTCAATATAAGCAAGAAGGAATTGGATTTGGATTGTTGTA
TCTTCGTTAAAGCCATGGGAAAGATATGTGCTTCTGCTTTTGCGGGTTGGTACCAATTTCCTGGTTTGGAAGTTTACGAGCCTAATCCTATGAAGGTTTACCAAAATTGT
GCAAGAAGAGTTGATGCTCTCCCACCAGCACCATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGTTCTCTTATTGGCAACAAACTTGGCAACTTTTCTTCAACCTTCAGTGGCAGACGACGACTACAATTCACCGATATGGGATGGATGGGTTGATGAAGATAGAGG
ATACACTCTAAGACCGTGTTTAGATATAATGAAGAGTGCAAAATGCCAGGTGGAACTTTATAATTATTACTTCAATATAAGCAAGAAGGAATTGGATTTGGATTGTTGTA
TCTTCGTTAAAGCCATGGGAAAGATATGTGCTTCTGCTTTTGCGGGTTGGTACCAATTTCCTGGTTTGGAAGTTTACGAGCCTAATCCTATGAAGGTTTACCAAAATTGT
GCAAGAAGAGTTGATGCTCTCCCACCAGCACCATTTTAA
Protein sequenceShow/hide protein sequence
MVVLLLATNLATFLQPSVADDDYNSPIWDGWVDEDRGYTLRPCLDIMKSAKCQVELYNYYFNISKKELDLDCCIFVKAMGKICASAFAGWYQFPGLEVYEPNPMKVYQNC
ARRVDALPPAPF