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MS025740 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025740
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionarabinogalactan peptide 23-like
Genome locationscaffold813:223874..226035
RNA-Seq ExpressionMS025740
SyntenyMS025740
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004672 - protein kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR044702 - Arabinogalactan protein 23/40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025661.1 Arabinogalactan peptide 23, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-0977.59Show/hide
Query:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGASLVAYL
        MEMKKIACA LFAAA+V A VA+D SLSP AAP P+SAASAALPALGSL+GASLV+++
Subjt:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGASLVAYL
XP_022933008.1 arabinogalactan peptide 23-like [Cucurbita moschata]2.6e-0976.19Show/hide
Query:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGA---SLVAYLFN
        MEMKKIACA LFAAA+V A VA+D SLSP AAP P+SAASA LPALGSL+GA   SLVAY FN
Subjt:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGA---SLVAYLFN
XP_022960230.1 arabinogalactan peptide 23-like [Cucurbita moschata]5.7e-0975.86Show/hide
Query:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGASLVAYL
        MEMKKIACA LFAAA++ A VA+D SLSP AAP P+SAASAALPALGSL+GASLV+++
Subjt:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGASLVAYL
XP_023004714.1 arabinogalactan peptide 23-like [Cucurbita maxima]8.8e-1077.78Show/hide
Query:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGASL---VAYLFN
        MEMKKIACA LFAAA+V A VA+D SLSP AAP P+SAASAALPALGSL+GASL   VAY FN
Subjt:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGASL---VAYLFN
XP_038899473.1 arabinogalactan protein 23-like [Benincasa hispida]6.8e-1079.31Show/hide
Query:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGASLVAYL
        MEMKKIACA LFAAA+V +AVAAD SLSP AAP P+SAASAALPALGSL+GASLV ++
Subjt:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGASLVAYL
TrEMBL top hitse value%identityAlignment
A0A1S3CDX5 arabinogalactan peptide 23-like1.5e-0768.33Show/hide
Query:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGASLVAYLFN
        MEMKKIACA LFAAA+V AAVAAD S+SP AAP P+SAASAALP LG+ + + + AY  N
Subjt:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGASLVAYLFN
A0A6J1F3F5 arabinogalactan peptide 23-like1.2e-0976.19Show/hide
Query:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGA---SLVAYLFN
        MEMKKIACA LFAAA+V A VA+D SLSP AAP P+SAASA LPALGSL+GA   SLVAY FN
Subjt:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGA---SLVAYLFN
A0A6J1H8I1 arabinogalactan peptide 23-like2.8e-0975.86Show/hide
Query:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGASLVAYL
        MEMKKIACA LFAAA++ A VA+D SLSP AAP P+SAASAALPALGSL+GASLV+++
Subjt:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGASLVAYL
A0A6J1IYE9 arabinogalactan peptide 23-like2.0e-0770.69Show/hide
Query:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGASLVAYL
        MEMK IAC  LF AA+V A VA+D S SP AAP P+SAASAALPALGSL+GASLV+++
Subjt:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGASLVAYL
A0A6J1KX42 arabinogalactan peptide 23-like4.3e-1077.78Show/hide
Query:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGASL---VAYLFN
        MEMKKIACA LFAAA+V A VA+D SLSP AAP P+SAASAALPALGSL+GASL   VAY FN
Subjt:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGASL---VAYLFN
SwissProt top hitse value%identityAlignment
Q8S2W4 Arabinogalactan protein 231.5e-0771.43Show/hide
Query:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGASLVA
        MEMKKIAC VLFAAAS+ A +AA+   +P  AP P SAASAALPALGSL+GASLV+
Subjt:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGASLVA
Arabidopsis top hitse value%identityAlignment
AT2G41905.1 BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1)1.1e-0560.32Show/hide
Query:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGASLV---AYLFN
        MEMKKIAC V+FAAAS+ A +AA+   +P   PA  S AS A+PALGSL+GASLV   AY  N
Subjt:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGASLV---AYLFN
AT3G57690.1 arabinogalactan protein 231.0e-0871.43Show/hide
Query:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGASLVA
        MEMKKIAC VLFAAAS+ A +AA+   +P  AP P SAASAALPALGSL+GASLV+
Subjt:  MEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGASLVA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTAGAGCCGCTGACGATAAACCTAGCAGTTTTCAGCCGGAGAACGCCGCCGCAATGGAAATGAAGAAGATCGCCTGCGCCGTCCTCTTCGCCGCCGCTTCCGTCGG
CGCTGCCGTGGCCGCCGATGCGTCACTCTCCCCCACCGCCGCGCCGGCACCCACCAGCGCCGCCTCCGCTGCTCTCCCCGCCCTCGGATCGCTCCTCGGCGCCTCCCTCG
TCGCCTACCTCTTCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTAGAGCCGCTGACGATAAACCTAGCAGTTTTCAGCCGGAGAACGCCGCCGCAATGGAAATGAAGAAGATCGCCTGCGCCGTCCTCTTCGCCGCCGCTTCCGTCGG
CGCTGCCGTGGCCGCCGATGCGTCACTCTCCCCCACCGCCGCGCCGGCACCCACCAGCGCCGCCTCCGCTGCTCTCCCCGCCCTCGGATCGCTCCTCGGCGCCTCCCTCG
TCGCCTACCTCTTCAACTGA
Protein sequenceShow/hide protein sequence
MCRAADDKPSSFQPENAAAMEMKKIACAVLFAAASVGAAVAADASLSPTAAPAPTSAASAALPALGSLLGASLVAYLFN