CuGenDBv2

Gene ID	MS025748
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	photosynthetic NDH subunit of subcomplex B 1, chloroplastic
Genome location	scaffold813:748133..751303
RNA-Seq Expression	MS025748
Synteny	MS025748
Gene Ontology terms	GO:0009773 - photosynthetic electron transport in photosystem I (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0010598 - NAD(P)H dehydrogenase complex (plastoquinone) (cellular component) GO:0016757 - transferase activity, transferring glycosyl groups (molecular function)
InterPro domains	IPR044983 - Photosynthetic NDH subunit of subcomplex B 1, chloroplastic

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6575629.1 Photosynthetic NDH subunit of subcomplex B 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

8.4e-249

92.55

Show/hide

Query:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRT-AKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKP FLAPPDIS  +++ SP K HI + AKKNPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRT-AKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL
        GFLKFPQGYMVE+ASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPA+YTDMVGLL
Subjt:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL

Query:  KSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV
        K RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKE+V
Subjt:  KSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV

Query:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIAT
        +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ IRGFKPVFVIPHEKERENVEEEVGD+ASIVFITTPGQLAALINDSAG+IAT
Subjt:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIAT

Query:  NTAAIQLAIAREKPSIALFSSDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
        NTAAIQLAIAREKPSIALF S+EKAKLFVPDAEAKRCI VSS TGRLIDIDMGTVKRAIQSFEVPLALAF
Subjt:  NTAAIQLAIAREKPSIALFSSDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF

XP_022145001.1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Momordica charantia]

3.4e-266

98.94

Show/hide

Query:  MAMATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNP
        MAMATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHI TAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNP
Subjt:  MAMATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNP

Query:  YGFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGL
        YGFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGL
Subjt:  YGFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGL

Query:  LKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEV
        LKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKV ISRKLKEV
Subjt:  LKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEV

Query:  VEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIA
        VEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDA I+FITTPGQLAALINDSAGLIA
Subjt:  VEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIA

Query:  TNTAAIQLAIAREKPSIALFSSDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
        TNTAAIQLAIAREKPSIALFSSDEKAKLFVPDAE+KRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
Subjt:  TNTAAIQLAIAREKPSIALFSSDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF

XP_022953552.1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita moschata]

6.4e-249

92.55

Show/hide

Query:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRT-AKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKP FLAPPDIS  +++ SP K HI + AKKNPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRT-AKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL
        GFLKFPQGYMVE+ASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPA+YTDMVGLL
Subjt:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL

Query:  KSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV
        K RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKE+V
Subjt:  KSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV

Query:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIAT
        +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ IRGFKPVFVIPHEKERENVEEEVGD+ASIVFITTPGQLAALINDSAG+IAT
Subjt:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIAT

Query:  NTAAIQLAIAREKPSIALFSSDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
        NTAAIQLAIAREKPSIALF S+EKAKLFVPD+EAKRCI VSSATGRLIDIDMGTVKRAIQSFEVPLALAF
Subjt:  NTAAIQLAIAREKPSIALFSSDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF

XP_022992479.1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita maxima]

5.4e-248

92.34

Show/hide

Query:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRT-AKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKP FLAPPDIS  +++ SP K HI + AKKNPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRT-AKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL
        GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFP IQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPA+YTDMVGLL
Subjt:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL

Query:  KSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV
        K RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKP+SSNLSEGGFNMYHQM DWLGRPFRSVPRHPVPPLKVSISRKLKE+V
Subjt:  KSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV

Query:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIAT
        +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ IRGFKPVFVIPHEKERENVEEEVGD+ASIVFITTPGQLAALINDSAG+IAT
Subjt:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIAT

Query:  NTAAIQLAIAREKPSIALFSSDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
        NTAAIQLAIAREKPSIALF S+EKAKLFVPDAEAKRCI VSSATGRLIDIDMGTVKRAIQSFEVPLALAF
Subjt:  NTAAIQLAIAREKPSIALFSSDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF

XP_038896546.1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Benincasa hispida]

1.2e-247

92.54

Show/hide

Query:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG
        MATSSLPTKSLPPF P+S+  PSSPSTHFTKPLFLAPPDIS  +++ S  K  I ++KKN W DPFDDGDDP+MEYGSLFADGKQEEDPRPPDNPNNPYG
Subjt:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG

Query:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
        FLKFPQGYMVEIASLGLKLRGDVRRCCCV+SGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
Subjt:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK

Query:  SRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVE
         RYYDMVLSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV 
Subjt:  SRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVE

Query:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATN
        EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ +RGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAG+IATN
Subjt:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATN

Query:  TAAIQLAIAREKPSIALFSSDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
        TAA+QLAIAREKPSIALF S+EKAKLFVPDAEAKRCITVSSATGRL DID+GTVK+AIQSFEVPLALAF
Subjt:  TAAIQLAIAREKPSIALFSSDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CEK1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic

6.7e-244

91.47

Show/hide

Query:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG
        MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKPLFL+P  IS LST+    K  I  +KKNPWFDPFDDG+DP+MEYGSLF+DGKQEEDPRPPDNPNNPYG
Subjt:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG

Query:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
        FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVG+LK
Subjt:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK

Query:  SRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVE
         RYYDMVLSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKP+SSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSI+RKLKEV+ 
Subjt:  SRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVE

Query:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATN
        EKYKKAG EKGKYIVIHGIESDSKASMQSKGDTDSLLPI+AWAEIA+ IRGFKPVFVIP EKERENVEEEVG++ASIVFITTPGQLAALINDSAGLIATN
Subjt:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATN

Query:  TAAIQLAIAREKPSIALFSSDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
        TAA+QLAIAREKPSIALF S+EKAKLFVPDAEAKRCITVSS TGRLIDIDMGT+K+AIQSFEVPLALAF
Subjt:  TAAIQLAIAREKPSIALFSSDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF

A0A5A7UYW0 Photosynthetic NDH subunit of subcomplex B 1

7.9e-245

91.68

Show/hide

Query:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG
        MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKPLFL+P  IS LST+    K  I  +KKNPWFDPFDDG+DP+MEYGSLF+DGKQEEDPRPPDNPNNPYG
Subjt:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYG

Query:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK
        FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVG+LK
Subjt:  FLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLK

Query:  SRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVE
         RYYDMVLSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKP+SSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSI+RKLKEV+ 
Subjt:  SRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVE

Query:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATN
        EKYKKAG EKGKYIVIHGIESDSKASMQSKGDTDSLLPI+AWAEIA+ IRGFKPVFVIPHEKERENVEEEVG++ASIVFITTPGQLAALINDSAGLIATN
Subjt:  EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATN

Query:  TAAIQLAIAREKPSIALFSSDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
        TAA+QLAIAREKPSIALF S+EKAKLFVPDAEAKRCITVSS TGRLIDIDMGT+K+AIQSFEVPLALAF
Subjt:  TAAIQLAIAREKPSIALFSSDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF

A0A6J1CV27 photosynthetic NDH subunit of subcomplex B 1, chloroplastic

1.6e-266

98.94

Show/hide

Query:  MAMATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNP
        MAMATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHI TAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNP
Subjt:  MAMATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNP

Query:  YGFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGL
        YGFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGL
Subjt:  YGFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGL

Query:  LKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEV
        LKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKV ISRKLKEV
Subjt:  LKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEV

Query:  VEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIA
        VEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDA I+FITTPGQLAALINDSAGLIA
Subjt:  VEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIA

Query:  TNTAAIQLAIAREKPSIALFSSDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
        TNTAAIQLAIAREKPSIALFSSDEKAKLFVPDAE+KRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
Subjt:  TNTAAIQLAIAREKPSIALFSSDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF

A0A6J1GNJ2 photosynthetic NDH subunit of subcomplex B 1, chloroplastic

3.1e-249

92.55

Show/hide

Query:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRT-AKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKP FLAPPDIS  +++ SP K HI + AKKNPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRT-AKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL
        GFLKFPQGYMVE+ASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPA+YTDMVGLL
Subjt:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL

Query:  KSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV
        K RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKE+V
Subjt:  KSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV

Query:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIAT
        +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ IRGFKPVFVIPHEKERENVEEEVGD+ASIVFITTPGQLAALINDSAG+IAT
Subjt:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIAT

Query:  NTAAIQLAIAREKPSIALFSSDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
        NTAAIQLAIAREKPSIALF S+EKAKLFVPD+EAKRCI VSSATGRLIDIDMGTVKRAIQSFEVPLALAF
Subjt:  NTAAIQLAIAREKPSIALFSSDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF

A0A6J1JXN2 photosynthetic NDH subunit of subcomplex B 1, chloroplastic

2.6e-248

92.34

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Query:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRT-AKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKP FLAPPDIS  +++ SP K HI + AKKNPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRT-AKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL
        GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFP IQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPA+YTDMVGLL
Subjt:  GFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLL

Query:  KSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV
        K RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKP+SSNLSEGGFNMYHQM DWLGRPFRSVPRHPVPPLKVSISRKLKE+V
Subjt:  KSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV

Query:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIAT
        +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ IRGFKPVFVIPHEKERENVEEEVGD+ASIVFITTPGQLAALINDSAG+IAT
Subjt:  EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIAT

Query:  NTAAIQLAIAREKPSIALFSSDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
        NTAAIQLAIAREKPSIALF S+EKAKLFVPDAEAKRCI VSSATGRLIDIDMGTVKRAIQSFEVPLALAF
Subjt:  NTAAIQLAIAREKPSIALFSSDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF

SwissProt top hits

e value

%identity

Alignment

Q9S9N6 Photosynthetic NDH subunit of subcomplex B 1, chloroplastic

3.8e-188

72.96

Show/hide

Query:  SSLPTKSLP-PFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFL
        SSLP   LP P  P   +PP S S    KPL     +     T+ S   S     K NPW DPFD G+DPD EYGSLFADGKQ+EDPRPPDNP+NPYGFL
Subjt:  SSLPTKSLP-PFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFL

Query:  KFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKSR
        KFP+GY VE+ASL LK+RGDVRRCCCVISGGVYENLLFFP IQL+KDRYPGVQ+D++ + RGKQTYELNKNVRW+NVYDPDD++PEPAEYTDM+GLLK R
Subjt:  KFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKSR

Query:  YYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVEEK
        YYDMVLSTKLAG+GHA FLFMTTARDRVSYIYP+VN+AGAGL LSETF  +++NLSE G++MY QM DWLGRPFRSVPR P+ PL+VSISRK+KEVV  K
Subjt:  YYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVEEK

Query:  YKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTA
        Y+ AGA  GK+IVIHGIESDSKASMQSKGD DSLL ++ WA+I   +RGFKPVFVIPHEKERENVE+ VGDD SIVFITTPGQLAALINDSAG+IATNTA
Subjt:  YKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTA

Query:  AIQLAIAREKPSIALFSSDEKAKLFVPDAEAK-RCITVSSATGRLIDIDMGTVKRAIQSFEVPLAL
        AIQLA AR+KP I LFSS+EK KLFVP AE K  C+ ++S TG+L DID+GTVK A+Q FE  LAL
Subjt:  AIQLAIAREKPSIALFSSDEKAKLFVPDAEAK-RCITVSSATGRLIDIDMGTVKRAIQSFEVPLAL

Arabidopsis top hits

e value

%identity

Alignment

AT1G15980.1 NDH-dependent cyclic electron flow 1

2.7e-189

72.96

Show/hide

Query:  SSLPTKSLP-PFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFL
        SSLP   LP P  P   +PP S S    KPL     +     T+ S   S     K NPW DPFD G+DPD EYGSLFADGKQ+EDPRPPDNP+NPYGFL
Subjt:  SSLPTKSLP-PFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFL

Query:  KFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKSR
        KFP+GY VE+ASL LK+RGDVRRCCCVISGGVYENLLFFP IQL+KDRYPGVQ+D++ + RGKQTYELNKNVRW+NVYDPDD++PEPAEYTDM+GLLK R
Subjt:  KFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKSR

Query:  YYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVEEK
        YYDMVLSTKLAG+GHA FLFMTTARDRVSYIYP+VN+AGAGL LSETF  +++NLSE G++MY QM DWLGRPFRSVPR P+ PL+VSISRK+KEVV  K
Subjt:  YYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVEEK

Query:  YKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTA
        Y+ AGA  GK+IVIHGIESDSKASMQSKGD DSLL ++ WA+I   +RGFKPVFVIPHEKERENVE+ VGDD SIVFITTPGQLAALINDSAG+IATNTA
Subjt:  YKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTA

Query:  AIQLAIAREKPSIALFSSDEKAKLFVPDAEAK-RCITVSSATGRLIDIDMGTVKRAIQSFEVPLAL
        AIQLA AR+KP I LFSS+EK KLFVP AE K  C+ ++S TG+L DID+GTVK A+Q FE  LAL
Subjt:  AIQLAIAREKPSIALFSSDEKAKLFVPDAEAK-RCITVSSATGRLIDIDMGTVKRAIQSFEVPLAL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCATGGCTACTTCTTCTCTACCCACCAAATCCCTCCCGCCATTTCTCCCAAGCTCAGCCTCCCCACCTTCTTCTCCTTCAACCCACTTCACCAAGCCGCTCTTTCT
AGCCCCACCCGACATTTCTCCTCTCTCCACTACCCCATCACCACCAAAATCTCACATCCGCACTGCCAAAAAGAACCCATGGTTCGATCCTTTCGACGACGGAGACGATC
CGGACATGGAATACGGCTCTCTCTTCGCCGACGGCAAGCAGGAGGAGGACCCTCGGCCGCCCGACAACCCCAATAATCCCTATGGGTTCTTGAAATTTCCTCAGGGCTAC
ATGGTGGAGATCGCTTCTCTGGGTCTGAAACTCCGGGGAGATGTCCGGCGGTGCTGCTGCGTGATCTCCGGCGGCGTCTACGAGAACTTACTCTTCTTTCCGGCCATTCA
ATTGCTCAAGGATCGGTACCCGGGAGTCCAGATAGACGTGGTGGCTTCGGCCAGGGGAAAACAGACTTATGAACTGAACAAGAATGTGAGATGGTCTAATGTCTACGACC
CGGATGATTATTTTCCTGAACCAGCAGAGTACACTGACATGGTTGGATTGCTCAAGAGTAGGTACTATGACATGGTCTTGTCAACCAAGCTAGCAGGGGTTGGGCATGCA
GTGTTTTTGTTTATGACAACAGCCAGAGATAGAGTGAGCTACATTTACCCAGATGTGAATGCTGCTGGAGCAGGGCTTTTCTTGTCTGAAACATTTAAACCAGATAGCTC
CAATCTTTCTGAGGGAGGGTTCAACATGTATCATCAAATGGTTGATTGGTTGGGGAGGCCATTTCGCAGCGTTCCTAGGCATCCTGTACCTCCGCTCAAAGTTTCGATTT
CGAGAAAACTGAAGGAGGTTGTAGAGGAGAAGTATAAGAAAGCAGGTGCTGAGAAAGGAAAATATATTGTGATTCATGGGATAGAATCAGATTCCAAAGCCTCAATGCAG
TCCAAAGGTGATACTGATAGCTTGCTGCCCATTCAAGCCTGGGCTGAAATAGCCAGTACTATAAGGGGATTCAAACCAGTTTTTGTCATCCCACATGAAAAAGAAAGAGA
GAATGTCGAGGAAGAGGTTGGGGATGATGCTAGCATCGTATTTATCACAACCCCGGGACAGCTAGCTGCTCTCATTAACGACTCGGCTGGTCTAATAGCCACCAACACAG
CTGCTATCCAACTCGCCATTGCTCGCGAAAAACCGAGCATTGCTTTGTTTTCCTCTGATGAGAAAGCAAAACTATTCGTTCCCGATGCCGAGGCAAAGAGATGCATCACG
GTTTCATCAGCGACAGGACGACTAATCGACATCGATATGGGCACGGTTAAAAGGGCCATACAGAGTTTTGAAGTGCCGCTAGCTCTTGCTTTTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAMATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGY
MVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHA
VFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVEEKYKKAGAEKGKYIVIHGIESDSKASMQ
SKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFSSDEKAKLFVPDAEAKRCIT
VSSATGRLIDIDMGTVKRAIQSFEVPLALAF

MS025748 (gene) of Bitter gourd (TR) v1 genome