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MS025760 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025760
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionserine-rich protein-related
Genome locationscaffold813:871646..871939
RNA-Seq ExpressionMS025760
SyntenyMS025760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY25961.1 Uncharacterized protein TCM_027325 [Theobroma cacao]1.1e-2259.09Show/hide
Query:  MATKTAPSSSASRLCLCAPTTHPGSFRCSFHRRPRKTSDKSKAAAASGGVD-----------WNKTDLVKAFLMQIIKPSSHDLQRRRNFQPKPSRFC--
        MATK + S S++R CLC+PTTHPGSFRCSFHR   K S KS AA  +  V+            +K  L+KAFLMQIIKPSSHDLQRRRNFQ KP+RFC  
Subjt:  MATKTAPSSSASRLCLCAPTTHPGSFRCSFHRRPRKTSDKSKAAAASGGVD-----------WNKTDLVKAFLMQIIKPSSHDLQRRRNFQPKPSRFC--

Query:  NVGSGGLAVS
        N  + G+AVS
Subjt:  NVGSGGLAVS

KAG6593379.1 hypothetical protein SDJN03_12855, partial [Cucurbita argyrosperma subsp. sororia]3.7e-2671Show/hide
Query:  MATKTAPSSSASRLCLCAPTTHPGSFRCSFHRRPRKTSDKSKAAAASGGVD--WNKTDLVKAFLMQIIKPSSHDLQRRRNFQPKPSRFCNVGSG-GLAVS
        MA KTAPSS   RLCLCAPTTHPGSFRCS HRR RK S+K       G      + TDLVKAFLMQ+IKPSS DLQRRRNFQPKPSRFCN  S  GLAVS
Subjt:  MATKTAPSSSASRLCLCAPTTHPGSFRCSFHRRPRKTSDKSKAAAASGGVD--WNKTDLVKAFLMQIIKPSSHDLQRRRNFQPKPSRFCNVGSG-GLAVS

KAG7014157.1 hypothetical protein SDJN02_24331, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-2267.68Show/hide
Query:  MATKTAPSSSASRLCLCAPTTHPGSFRCSFHRRPRKTSDK--------SKAAAASGGVDWNKTDLVKAFLMQIIKPSSHDLQRRRNFQPKPSRFCNVGS
        MA KTA   S+SRLCLCAPT+HPGSFRCS HRRPRK SDK        SKAA A+       T L K FLMQ IKPSSHDL RRRNFQPKPSRFCN  S
Subjt:  MATKTAPSSSASRLCLCAPTTHPGSFRCSFHRRPRKTSDK--------SKAAAASGGVDWNKTDLVKAFLMQIIKPSSHDLQRRRNFQPKPSRFCNVGS

KAG7025727.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-2570.41Show/hide
Query:  MATKTAPSSSASRLCLCAPTTHPGSFRCSFHRRPRKTSDKSKAAAASGGVD--WNKTDLVKAFLMQIIKPSSHDLQRRRNFQPKPSRFCNVGSG-GLA
        MA KTAPSS   RLCLCAPTTHPGSFRCS HRR RK S+K       G      + TDLVKAFLMQ+IKPSS DLQRRRNFQPKPSRFCN  S  GLA
Subjt:  MATKTAPSSSASRLCLCAPTTHPGSFRCSFHRRPRKTSDKSKAAAASGGVD--WNKTDLVKAFLMQIIKPSSHDLQRRRNFQPKPSRFCNVGSG-GLA

XP_022151454.1 uncharacterized protein LOC111019381 [Momordica charantia]6.1e-4596.94Show/hide
Query:  MATKTAPSS-SASRLCLCAPTTHPGSFRCSFHRRPRKTSDKSKAAAASGGVDWNKTDLVKAFLMQIIKPSSHDLQRRRNFQPKPSRFCNVGSGGLAVS
        MATKTAPSS SASRLCLCAPTTHPGSFRCS HRRPRK SDKSKAAAASGGVDWNKTDLVKAFLMQIIKPSSHDLQRRRNFQPKPSRFCNVGSGGLAVS
Subjt:  MATKTAPSS-SASRLCLCAPTTHPGSFRCSFHRRPRKTSDKSKAAAASGGVDWNKTDLVKAFLMQIIKPSSHDLQRRRNFQPKPSRFCNVGSGGLAVS

TrEMBL top hitse value%identityAlignment
A0A061G8R4 Uncharacterized protein5.4e-2359.09Show/hide
Query:  MATKTAPSSSASRLCLCAPTTHPGSFRCSFHRRPRKTSDKSKAAAASGGVD-----------WNKTDLVKAFLMQIIKPSSHDLQRRRNFQPKPSRFC--
        MATK + S S++R CLC+PTTHPGSFRCSFHR   K S KS AA  +  V+            +K  L+KAFLMQIIKPSSHDLQRRRNFQ KP+RFC  
Subjt:  MATKTAPSSSASRLCLCAPTTHPGSFRCSFHRRPRKTSDKSKAAAASGGVD-----------WNKTDLVKAFLMQIIKPSSHDLQRRRNFQPKPSRFC--

Query:  NVGSGGLAVS
        N  + G+AVS
Subjt:  NVGSGGLAVS

A0A1Q3BSF8 Uncharacterized protein (Fragment)7.8e-2260.42Show/hide
Query:  SSSASRLCLCAPTTHPGSFRCSFHRRPRKTSDKSKAAAA-------SGGVDWNKTDLVKAFLMQIIKPSSHDLQRRRNFQPKPSRFCNVGSGGLAV
        SSS+SR CLC+PTTHPGSFRC+ HR  +K S KS + +        S  +  +KT++VKAFLMQIIKPSS DLQRRRNFQPKP+RFC + S G  V
Subjt:  SSSASRLCLCAPTTHPGSFRCSFHRRPRKTSDKSKAAAA-------SGGVDWNKTDLVKAFLMQIIKPSSHDLQRRRNFQPKPSRFCNVGSGGLAV

A0A5B7BSA6 Uncharacterized protein (Fragment)9.2e-2361.39Show/hide
Query:  MATKTAPSSSASRLCLCAPTTHPGSFRCSFHRRPRKTSDKSKA--AAASGGVDWNKTDLVKAFLMQIIKPSSHDLQRRRNFQPKPSRFC--NVGSGGLAV
        MA++ + SSS++R CLC+PTTHPGSFRCS HR  RK S +S A           +KT L+KAFLM IIKPSSHDLQRRRNFQPKP+RFC  N    G+AV
Subjt:  MATKTAPSSSASRLCLCAPTTHPGSFRCSFHRRPRKTSDKSKA--AAASGGVDWNKTDLVKAFLMQIIKPSSHDLQRRRNFQPKPSRFC--NVGSGGLAV

Query:  S
        S
Subjt:  S

A0A6J1DD51 uncharacterized protein LOC1110193812.9e-4596.94Show/hide
Query:  MATKTAPSS-SASRLCLCAPTTHPGSFRCSFHRRPRKTSDKSKAAAASGGVDWNKTDLVKAFLMQIIKPSSHDLQRRRNFQPKPSRFCNVGSGGLAVS
        MATKTAPSS SASRLCLCAPTTHPGSFRCS HRRPRK SDKSKAAAASGGVDWNKTDLVKAFLMQIIKPSSHDLQRRRNFQPKPSRFCNVGSGGLAVS
Subjt:  MATKTAPSS-SASRLCLCAPTTHPGSFRCSFHRRPRKTSDKSKAAAASGGVDWNKTDLVKAFLMQIIKPSSHDLQRRRNFQPKPSRFCNVGSGGLAVS

A0A6P6BJ71 uncharacterized protein LOC1113185187.8e-2254.7Show/hide
Query:  MATKTAPSSSASRLCLCAPTTHPGSFRCSFHRRPRKTSDK------------SKAA------AASGGVDWNKTDLVKAFLMQIIKPSSHDLQRRRNFQPK
        MATK++ S S++R CLC+PT HPGSFRCS HR   K S K            SKAA      A+      +KT L+KAFLMQIIKPSSHD+QRRRNF PK
Subjt:  MATKTAPSSSASRLCLCAPTTHPGSFRCSFHRRPRKTSDK------------SKAA------AASGGVDWNKTDLVKAFLMQIIKPSSHDLQRRRNFQPK

Query:  PSRFC--NVGSGGLAVS
        P+RFC  N  + G+AVS
Subjt:  PSRFC--NVGSGGLAVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13227.1 serine-rich protein-related4.5e-0654.17Show/hide
Query:  SSSASRLCLCAPTTHPGSFRCSFHRR------PRKTSDKSKAAAASGG
        SSS  + CLCAPTTHPGSFRC +HRR       R TS  S  +  +GG
Subjt:  SSSASRLCLCAPTTHPGSFRCSFHRR------PRKTSDKSKAAAASGG

AT5G11090.1 serine-rich protein-related7.2e-1237.5Show/hide
Query:  SRLCLCAPTTHPGSFRCSFHRRPRKTSDKSKAAAASGGVDWNKT--------------DLVKAFLMQIIKPSSHDLQRRRNFQPKPSR
        SR C+C+PTTHPGSFRCS H+       +  A+  + G++  ++              + V+  L  +I+PSSH L+RR  +QP+PSR
Subjt:  SRLCLCAPTTHPGSFRCSFHRRPRKTSDKSKAAAASGGVDWNKT--------------DLVKAFLMQIIKPSSHDLQRRRNFQPKPSR

AT5G20370.1 serine-rich protein-related3.7e-0834.31Show/hide
Query:  RLCLCAPTTHPGSFRCSFHRRPRKTSDKSKAAA-------------ASGGVDWNKTDLV---------------KAFLMQIIKPSSHDLQRRRNFQPKPS
        R CLC+PTTHPGSFRCSFHRR      K+ A++              + G++  K  L+               ++    + KPSS    RR  F+P+ S
Subjt:  RLCLCAPTTHPGSFRCSFHRRPRKTSDKSKAAA-------------ASGGVDWNKTDLV---------------KAFLMQIIKPSSHDLQRRRNFQPKPS

Query:  RF
        RF
Subjt:  RF

AT5G25280.1 serine-rich protein-related1.4e-1032.97Show/hide
Query:  RLCLCAPTTHPGSFRCSFHRRPRKTSDKSKAAAASGGVDWNKT--------------DLVKAFLMQIIKPSSHDLQRRRNFQPKPSRFCNV
        R C+C+PTTHPGSFRCS H+       +  A+  + G++  ++              + V+  L  +I+PSSH L+RR  ++P+ SR  ++
Subjt:  RLCLCAPTTHPGSFRCSFHRRPRKTSDKSKAAAASGGVDWNKT--------------DLVKAFLMQIIKPSSHDLQRRRNFQPKPSRFCNV

AT5G25280.2 serine-rich protein-related1.4e-1032.97Show/hide
Query:  RLCLCAPTTHPGSFRCSFHRRPRKTSDKSKAAAASGGVDWNKT--------------DLVKAFLMQIIKPSSHDLQRRRNFQPKPSRFCNV
        R C+C+PTTHPGSFRCS H+       +  A+  + G++  ++              + V+  L  +I+PSSH L+RR  ++P+ SR  ++
Subjt:  RLCLCAPTTHPGSFRCSFHRRPRKTSDKSKAAAASGGVDWNKT--------------DLVKAFLMQIIKPSSHDLQRRRNFQPKPSRFCNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCAAAACCGCTCCCTCCTCCTCCGCCTCCCGCCTCTGCCTCTGTGCTCCGACCACCCATCCCGGCTCTTTCCGGTGCAGCTTCCACCGCCGTCCGCGTAAGAC
CTCAGACAAATCCAAGGCCGCAGCCGCGAGCGGCGGCGTCGATTGGAACAAGACCGATCTCGTTAAGGCGTTTCTGATGCAGATCATCAAACCGTCGAGTCACGATCTCC
AGAGGAGGAGGAATTTCCAGCCGAAACCCTCCCGATTCTGTAATGTCGGCTCCGGTGGATTGGCGGTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACCAAAACCGCTCCCTCCTCCTCCGCCTCCCGCCTCTGCCTCTGTGCTCCGACCACCCATCCCGGCTCTTTCCGGTGCAGCTTCCACCGCCGTCCGCGTAAGAC
CTCAGACAAATCCAAGGCCGCAGCCGCGAGCGGCGGCGTCGATTGGAACAAGACCGATCTCGTTAAGGCGTTTCTGATGCAGATCATCAAACCGTCGAGTCACGATCTCC
AGAGGAGGAGGAATTTCCAGCCGAAACCCTCCCGATTCTGTAATGTCGGCTCCGGTGGATTGGCGGTTTCTTGA
Protein sequenceShow/hide protein sequence
MATKTAPSSSASRLCLCAPTTHPGSFRCSFHRRPRKTSDKSKAAAASGGVDWNKTDLVKAFLMQIIKPSSHDLQRRRNFQPKPSRFCNVGSGGLAVS