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MS025784 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025784
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLOB domain-containing protein
Genome locationscaffold813:2344868..2346368
RNA-Seq ExpressionMS025784
SyntenyMS025784
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059428.1 LOB domain-containing protein 22 [Cucumis melo var. makuwa]3.5e-2548.63Show/hide
Query:  QQAAAVQRHEAVAFNGEMVLLDPDPLNGYGQPQQQPPPPQHQFLQPYEVEVEAEAFAGQFGSNNDDNNFRESLDGEVEVEVWGMQDSLSSSSLHIKQGGA
        QQAAA     A A      +L+ DP++GY          +HQF++ YE E          G    +N   ESL+ + EVEVWG+QDS S SSL +KQ G+
Subjt:  QQAAAVQRHEAVAFNGEMVLLDPDPLNGYGQPQQQPPPPQHQFLQPYEVEVEAEAFAGQFGSNNDDNNFRESLDGEVEVEVWGMQDSLSSSSLHIKQGGA

Query:  GAGAPLNDFDDIKLHTDHHDHHQHHQHLKFHPHHHDLLHHSEEAMLKMDNVMLKEDSDPIQQAQEQDLKGAVDTLFTFSNSDT
             ++DF DIK+  D++  HQH Q LKF   H DL+H SEE MLKMDN++LKEDSDPIQQ Q+Q+LKGA+DTLFTF   DT
Subjt:  GAGAPLNDFDDIKLHTDHHDHHQHHQHLKFHPHHHDLLHHSEEAMLKMDNVMLKEDSDPIQQAQEQDLKGAVDTLFTFSNSDT

KAG7014013.1 LOB domain-containing protein 22, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-2445.92Show/hide
Query:  MQQAAAVQRHEAVAFNGEMVLLDPDPLNGYGQPQQQPPPPQHQFLQPYEVEVEAEAFAGQFGSNNDDNNFRESLDGEVEVEVWGMQDSLSSSSLHIKQGG
        + Q A  ++  A A    + +L+ DP++GYG         +HQF++ Y          G  G    +N  RE+L+ + EVEVWG+QD  S SSL +K  G
Subjt:  MQQAAAVQRHEAVAFNGEMVLLDPDPLNGYGQPQQQPPPPQHQFLQPYEVEVEAEAFAGQFGSNNDDNNFRESLDGEVEVEVWGMQDSLSSSSLHIKQGG

Query:  AGAGAPLNDFDDIKLHTDHHDHHQHHQH----------LKF---HPHHHDLLHHSEEAMLKMDNVMLKEDSDPIQQAQEQDLKGAVDTLFTFSNSD
        +     + DF DIK+ T++ +HH HHQ           L+F   H  HHDL+HHSEEAMLKMDNVMLKE SDPIQQAQ+Q+LKGAVDTLFTF   D
Subjt:  AGAGAPLNDFDDIKLHTDHHDHHQHHQH----------LKF---HPHHHDLLHHSEEAMLKMDNVMLKEDSDPIQQAQEQDLKGAVDTLFTFSNSD

XP_011659803.2 LOB domain-containing protein 22 [Cucumis sativus]3.2e-2649.73Show/hide
Query:  QQAAAVQRHEAVAFNGEMVLLDPDPLNGYGQPQQQPPPPQHQFLQPYEVEVEAEAFAGQFGSNNDDNNFRESLDGEVEVEVWGMQDSLSSSSLHIKQGGA
        QQAAA     A A      +L+ DP+ GYG         +HQF++ YE E          G    +N   ESL+ + EVEVWG+QD  S SSL +KQ G+
Subjt:  QQAAAVQRHEAVAFNGEMVLLDPDPLNGYGQPQQQPPPPQHQFLQPYEVEVEAEAFAGQFGSNNDDNNFRESLDGEVEVEVWGMQDSLSSSSLHIKQGGA

Query:  GAGAPLNDFDDIKLH-TDHHDHHQHHQHLKFH-PHHHDLLHHSEEAMLKMDNVMLKEDSDPIQQAQEQDLKGAVDTLFTFSNSDT
             ++DF DIK+H  +HH HH   Q LKF   HH DL+H SEE MLKMDN++LKEDSDPIQQ Q+Q+LKGAVDTLFTF + DT
Subjt:  GAGAPLNDFDDIKLH-TDHHDHHQHHQHLKFH-PHHHDLLHHSEEAMLKMDNVMLKEDSDPIQQAQEQDLKGAVDTLFTFSNSDT

XP_022149482.1 uncharacterized protein LOC111017897 [Momordica charantia]1.9e-47100Show/hide
Query:  MQDSLSSSSLHIKQGGAGAGAPLNDFDDIKLHTDHHDHHQHHQHLKFHPHHHDLLHHSEEAMLKMDNVMLKEDSDPIQQAQEQDLKGAVDTLFTFSNSDT
        MQDSLSSSSLHIKQGGAGAGAPLNDFDDIKLHTDHHDHHQHHQHLKFHPHHHDLLHHSEEAMLKMDNVMLKEDSDPIQQAQEQDLKGAVDTLFTFSNSDT
Subjt:  MQDSLSSSSLHIKQGGAGAGAPLNDFDDIKLHTDHHDHHQHHQHLKFHPHHHDLLHHSEEAMLKMDNVMLKEDSDPIQQAQEQDLKGAVDTLFTFSNSDT

XP_038899918.1 LOB domain-containing protein 22 [Benincasa hispida]8.3e-2750.81Show/hide
Query:  QQAAAVQRHEAVAFNGEMVLLDPDPLNGYGQPQQQPPPPQHQFLQPYEVEVEAEAFAGQFGSNNDDNNFRESLDGEVEVEVWGMQDSLSSSSLHIKQGGA
        QQAAA     A A      +L+ DP++GYG         +HQF++ YE E          G    +N   ESL+ + +VEVWG+QD  S SSL +KQ G+
Subjt:  QQAAAVQRHEAVAFNGEMVLLDPDPLNGYGQPQQQPPPPQHQFLQPYEVEVEAEAFAGQFGSNNDDNNFRESLDGEVEVEVWGMQDSLSSSSLHIKQGGA

Query:  GAGAPLNDFDDIKLHTDHHDHHQHHQHLKF-HPHHHDLLHHSEEAMLKMDNVMLKEDSDPIQQAQEQDLKGA-VDTLFTFSNSDT
             ++DF DIK+ +++H HHQH + LKF H HHHDL+H SEE MLKMDNV+LKEDSDPIQQAQ+Q+LKGA VDTLFTF   DT
Subjt:  GAGAPLNDFDDIKLHTDHHDHHQHHQHLKF-HPHHHDLLHHSEEAMLKMDNVMLKEDSDPIQQAQEQDLKGA-VDTLFTFSNSDT

TrEMBL top hitse value%identityAlignment
A0A0A0K9M3 LOB domain-containing protein1.5e-2649.73Show/hide
Query:  QQAAAVQRHEAVAFNGEMVLLDPDPLNGYGQPQQQPPPPQHQFLQPYEVEVEAEAFAGQFGSNNDDNNFRESLDGEVEVEVWGMQDSLSSSSLHIKQGGA
        QQAAA     A A      +L+ DP+ GYG         +HQF++ YE E          G    +N   ESL+ + EVEVWG+QD  S SSL +KQ G+
Subjt:  QQAAAVQRHEAVAFNGEMVLLDPDPLNGYGQPQQQPPPPQHQFLQPYEVEVEAEAFAGQFGSNNDDNNFRESLDGEVEVEVWGMQDSLSSSSLHIKQGGA

Query:  GAGAPLNDFDDIKLH-TDHHDHHQHHQHLKFH-PHHHDLLHHSEEAMLKMDNVMLKEDSDPIQQAQEQDLKGAVDTLFTFSNSDT
             ++DF DIK+H  +HH HH   Q LKF   HH DL+H SEE MLKMDN++LKEDSDPIQQ Q+Q+LKGAVDTLFTF + DT
Subjt:  GAGAPLNDFDDIKLH-TDHHDHHQHHQHLKFH-PHHHDLLHHSEEAMLKMDNVMLKEDSDPIQQAQEQDLKGAVDTLFTFSNSDT

A0A5D3BWM0 LOB domain-containing protein 221.7e-2548.63Show/hide
Query:  QQAAAVQRHEAVAFNGEMVLLDPDPLNGYGQPQQQPPPPQHQFLQPYEVEVEAEAFAGQFGSNNDDNNFRESLDGEVEVEVWGMQDSLSSSSLHIKQGGA
        QQAAA     A A      +L+ DP++GY          +HQF++ YE E          G    +N   ESL+ + EVEVWG+QDS S SSL +KQ G+
Subjt:  QQAAAVQRHEAVAFNGEMVLLDPDPLNGYGQPQQQPPPPQHQFLQPYEVEVEAEAFAGQFGSNNDDNNFRESLDGEVEVEVWGMQDSLSSSSLHIKQGGA

Query:  GAGAPLNDFDDIKLHTDHHDHHQHHQHLKFHPHHHDLLHHSEEAMLKMDNVMLKEDSDPIQQAQEQDLKGAVDTLFTFSNSDT
             ++DF DIK+  D++  HQH Q LKF   H DL+H SEE MLKMDN++LKEDSDPIQQ Q+Q+LKGA+DTLFTF   DT
Subjt:  GAGAPLNDFDDIKLHTDHHDHHQHHQHLKFHPHHHDLLHHSEEAMLKMDNVMLKEDSDPIQQAQEQDLKGAVDTLFTFSNSDT

A0A6J1D829 uncharacterized protein LOC1110178979.2e-48100Show/hide
Query:  MQDSLSSSSLHIKQGGAGAGAPLNDFDDIKLHTDHHDHHQHHQHLKFHPHHHDLLHHSEEAMLKMDNVMLKEDSDPIQQAQEQDLKGAVDTLFTFSNSDT
        MQDSLSSSSLHIKQGGAGAGAPLNDFDDIKLHTDHHDHHQHHQHLKFHPHHHDLLHHSEEAMLKMDNVMLKEDSDPIQQAQEQDLKGAVDTLFTFSNSDT
Subjt:  MQDSLSSSSLHIKQGGAGAGAPLNDFDDIKLHTDHHDHHQHHQHLKFHPHHHDLLHHSEEAMLKMDNVMLKEDSDPIQQAQEQDLKGAVDTLFTFSNSDT

A0A6J1GR11 LOB domain-containing protein 29-like4.6e-2346.15Show/hide
Query:  MQQAAAVQRHEAVAFNGEMVLLDPDPLNGYGQPQQQPPPPQHQFLQPYEVEVEAEAFAGQFGSNNDDNNFRESLDGEVEVEVWGMQDSLSSSSLHIKQGG
        + Q A  ++  A A    + +L+ DP++GYG         +HQF++ Y          G  G    +N  RE+L+ + EVEVWG+QD  S SSL +K  G
Subjt:  MQQAAAVQRHEAVAFNGEMVLLDPDPLNGYGQPQQQPPPPQHQFLQPYEVEVEAEAFAGQFGSNNDDNNFRESLDGEVEVEVWGMQDSLSSSSLHIKQGG

Query:  AGAGAPLNDFDDIKLHTD----HHDHHQHHQH-----LKF---HPHHHDLLHHSEEAMLKMDNVMLKEDSDPIQQAQEQDLKGAVDTLFTFSNSD
        +     + DF DIK+ T+    HH HHQ  Q      L+F   H  HHDL+HHSEEA+LKMDNVMLKE SDPIQQAQ+Q+LKGAVDTLFTF   D
Subjt:  AGAGAPLNDFDDIKLHTD----HHDHHQHHQH-----LKF---HPHHHDLLHHSEEAMLKMDNVMLKEDSDPIQQAQEQDLKGAVDTLFTFSNSD

A0A6J1JXA6 LOB domain-containing protein 29-like7.9e-2345.6Show/hide
Query:  MQQAAAVQRHEAVAFNGEMVLLDPDPLNGYGQPQQQPPPPQHQFLQPYEVEVEAEAFAGQFGSNNDDNNFRESLDGEVEVEVWGMQDSLSSSSLHIKQGG
        + Q A  ++  A A    + +L+ DP++GYG         +HQF++ Y          G  G    +N  RE+L+ + EVEVWG+QD  S SSL +K  G
Subjt:  MQQAAAVQRHEAVAFNGEMVLLDPDPLNGYGQPQQQPPPPQHQFLQPYEVEVEAEAFAGQFGSNNDDNNFRESLDGEVEVEVWGMQDSLSSSSLHIKQGG

Query:  AGAGAPLNDFDDIKLHTDHHDHHQHHQH--------LKFHPHHH--DLLHHSEEAMLKMDNVMLKEDSDPIQQAQEQDLKGAVDTLFTFSNSD
        +     + DF DIK+ T++ +HH HHQ         L+F   HH  DL+H SEEAMLKMDNVMLKE SDPIQQAQ+Q+LKGAVDTLFTF   D
Subjt:  AGAGAPLNDFDDIKLHTDHHDHHQHHQH--------LKFHPHHH--DLLHHSEEAMLKMDNVMLKEDSDPIQQAQEQDLKGAVDTLFTFSNSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCAAGCTGCGGCCGTGCAGCGGCACGAGGCGGTGGCGTTCAATGGGGAGATGGTGCTGTTGGATCCGGATCCGTTGAACGGGTACGGGCAGCCACAGCAGCAGCC
ACCGCCACCGCAGCACCAGTTTCTGCAGCCGTATGAGGTGGAGGTGGAGGCGGAGGCGTTTGCGGGGCAATTTGGGAGTAATAACGATGATAATAATTTTAGAGAGAGTT
TGGATGGAGAAGTAGAAGTTGAAGTGTGGGGAATGCAGGATTCTCTTTCTTCCTCTTCTTTGCATATCAAACAGGGCGGCGCCGGCGCCGGCGCCCCTCTTAACGATTTT
GATGATATCAAACTTCACACGGATCACCATGATCATCATCAGCATCATCAACATCTTAAGTTTCACCCTCATCATCATGACCTACTTCATCACAGTGAAGAAGCTATGCT
GAAGATGGACAATGTGATGTTGAAAGAAGACTCTGACCCAATACAACAGGCTCAAGAGCAAGACCTTAAAGGTGCAGTAGACACTTTATTTACCTTCTCAAATTCTGATA
CTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGCAAGCTGCGGCCGTGCAGCGGCACGAGGCGGTGGCGTTCAATGGGGAGATGGTGCTGTTGGATCCGGATCCGTTGAACGGGTACGGGCAGCCACAGCAGCAGCC
ACCGCCACCGCAGCACCAGTTTCTGCAGCCGTATGAGGTGGAGGTGGAGGCGGAGGCGTTTGCGGGGCAATTTGGGAGTAATAACGATGATAATAATTTTAGAGAGAGTT
TGGATGGAGAAGTAGAAGTTGAAGTGTGGGGAATGCAGGATTCTCTTTCTTCCTCTTCTTTGCATATCAAACAGGGCGGCGCCGGCGCCGGCGCCCCTCTTAACGATTTT
GATGATATCAAACTTCACACGGATCACCATGATCATCATCAGCATCATCAACATCTTAAGTTTCACCCTCATCATCATGACCTACTTCATCACAGTGAAGAAGCTATGCT
GAAGATGGACAATGTGATGTTGAAAGAAGACTCTGACCCAATACAACAGGCTCAAGAGCAAGACCTTAAAGGTGCAGTAGACACTTTATTTACCTTCTCAAATTCTGATA
CTTAG
Protein sequenceShow/hide protein sequence
MQQAAAVQRHEAVAFNGEMVLLDPDPLNGYGQPQQQPPPPQHQFLQPYEVEVEAEAFAGQFGSNNDDNNFRESLDGEVEVEVWGMQDSLSSSSLHIKQGGAGAGAPLNDF
DDIKLHTDHHDHHQHHQHLKFHPHHHDLLHHSEEAMLKMDNVMLKEDSDPIQQAQEQDLKGAVDTLFTFSNSDT