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MS025785 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025785
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionIntegrase_H2C2 domain-containing protein
Genome locationscaffold813:2346449..2346862
RNA-Seq ExpressionMS025785
SyntenyMS025785
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN78640.1 hypothetical protein VITISV_031739 [Vitis vinifera]1.0e-2161.32Show/hide
Query:  ADGELVEDDVELGLAILDLTLEVADDAVAAADGVEGADVGLEDDGTHGLFLLEGVEVLDDLGDVADAEELVGVQELALPVVGEVWGKNAVRGALPALVFA
        A G+++ED VEL L +LDL LEV DD VA ADGV GADV LE+DG HGL L+  VEV DDLGDVAD ++ + V+ELAL  V ++ G+NAVRGA   LVFA
Subjt:  ADGELVEDDVELGLAILDLTLEVADDAVAAADGVEGADVGLEDDGTHGLFLLEGVEVLDDLGDVADAEELVGVQELALPVVGEVWGKNAVRGALPALVFA

Query:  GGAGLG
          A LG
Subjt:  GGAGLG

PON48152.1 hypothetical protein PanWU01x14_239400 [Parasponia andersonii]1.1e-2369.9Show/hide
Query:  ELVEDDVELGLAILDLTLEVADDAVAAADGVEGADVGLEDDGTHGLFLLE-GVEVLDDLGDVADAEELVGVQELALPVVGEVWGKNAVRGALPALVFAGG
        E++E++VELGL  ++L LEV DDAVAAA+GV GA VGLEDDG HG+ L + GVE+ DDLGDVADAEELV V+EL L VVGEV G+NAVRGALPALV A  
Subjt:  ELVEDDVELGLAILDLTLEVADDAVAAADGVEGADVGLEDDGTHGLFLLE-GVEVLDDLGDVADAEELVGVQELALPVVGEVWGKNAVRGALPALVFAGG

Query:  AGL
        A L
Subjt:  AGL

PON96154.1 hypothetical protein TorRG33x02_080840 [Trema orientale]1.3e-2167.96Show/hide
Query:  ELVEDDVELGLAILDLTLEVADDAVAAADGVEGADVGLEDDGTHGLFL-LEGVEVLDDLGDVADAEELVGVQELALPVVGEVWGKNAVRGALPALVFAGG
        E++ED+VELGL  ++L LEV DDAVAAA+GV GA VGLEDDG HG+     GVE+ DDLGDVADAEELV V+EL L VVGEV G+NAV G LPALV A  
Subjt:  ELVEDDVELGLAILDLTLEVADDAVAAADGVEGADVGLEDDGTHGLFL-LEGVEVLDDLGDVADAEELVGVQELALPVVGEVWGKNAVRGALPALVFAGG

Query:  AGL
        A L
Subjt:  AGL

RWV86912.1 hypothetical protein GW17_00051143, partial [Ensete ventricosum]1.3e-2156.3Show/hide
Query:  SVDLADGELVEDDVELGLAILDLTLEVADDAVAAADGVEGADVGLEDDGTHGLFLLEGVEVLDDLGDVADAEELVGVQELALPVVGEVWGKNAVRGALPA
        S+  ADGEL + + EL    LDL LEVADDAVA ADG+E   +GL  DG HG  +L G+EV DD  DVADAE+ VGV+EL L V  +V G+ AV  AL A
Subjt:  SVDLADGELVEDDVELGLAILDLTLEVADDAVAAADGVEGADVGLEDDGTHGLFLLEGVEVLDDLGDVADAEELVGVQELALPVVGEVWGKNAVRGALPA

Query:  LVFAGGAGLG----GGGGRRGGGRRRVGSAVVVGA
        LVFAGGAGLG    GGGG  GGG R+ G  V+  +
Subjt:  LVFAGGAGLG----GGGGRRGGGRRRVGSAVVVGA

RWW56882.1 hypothetical protein BHE74_00036373 [Ensete ventricosum]1.3e-2156.3Show/hide
Query:  SVDLADGELVEDDVELGLAILDLTLEVADDAVAAADGVEGADVGLEDDGTHGLFLLEGVEVLDDLGDVADAEELVGVQELALPVVGEVWGKNAVRGALPA
        S+  ADGEL + + EL    LDL LEVADDAVA ADG+E   +GL  DG HG  +L G+EV DD  DVADAE+ VGV+EL L V  +V G+ AV  AL A
Subjt:  SVDLADGELVEDDVELGLAILDLTLEVADDAVAAADGVEGADVGLEDDGTHGLFLLEGVEVLDDLGDVADAEELVGVQELALPVVGEVWGKNAVRGALPA

Query:  LVFAGGAGLG----GGGGRRGGGRRRVGSAVVVGA
        LVFAGGAGLG    GGGG  GGG R+ G  V+  +
Subjt:  LVFAGGAGLG----GGGGRRGGGRRRVGSAVVVGA

TrEMBL top hitse value%identityAlignment
A0A2P5BH77 Uncharacterized protein5.3e-2469.9Show/hide
Query:  ELVEDDVELGLAILDLTLEVADDAVAAADGVEGADVGLEDDGTHGLFLLE-GVEVLDDLGDVADAEELVGVQELALPVVGEVWGKNAVRGALPALVFAGG
        E++E++VELGL  ++L LEV DDAVAAA+GV GA VGLEDDG HG+ L + GVE+ DDLGDVADAEELV V+EL L VVGEV G+NAVRGALPALV A  
Subjt:  ELVEDDVELGLAILDLTLEVADDAVAAADGVEGADVGLEDDGTHGLFLLE-GVEVLDDLGDVADAEELVGVQELALPVVGEVWGKNAVRGALPALVFAGG

Query:  AGL
        A L
Subjt:  AGL

A0A2P5FEG2 Uncharacterized protein6.5e-2267.96Show/hide
Query:  ELVEDDVELGLAILDLTLEVADDAVAAADGVEGADVGLEDDGTHGLFL-LEGVEVLDDLGDVADAEELVGVQELALPVVGEVWGKNAVRGALPALVFAGG
        E++ED+VELGL  ++L LEV DDAVAAA+GV GA VGLEDDG HG+     GVE+ DDLGDVADAEELV V+EL L VVGEV G+NAV G LPALV A  
Subjt:  ELVEDDVELGLAILDLTLEVADDAVAAADGVEGADVGLEDDGTHGLFL-LEGVEVLDDLGDVADAEELVGVQELALPVVGEVWGKNAVRGALPALVFAGG

Query:  AGL
        A L
Subjt:  AGL

A0A427AK94 Uncharacterized protein8.4e-2255.56Show/hide
Query:  SVDLADGELVEDDVELGLAILDLTLEVADDAVAAADGVEGADVGLEDDGTHGLFLLEGVEVLDDLGDVADAEELVGVQELALPVVGEVWGKNAVRGALPA
        S+  ADGEL + + EL    LDL LEVADDAVA ADG+E   +GL  DG HG  +L G+EV DD  D+ADAE+ VGV+EL L V  +V G+ AV  AL A
Subjt:  SVDLADGELVEDDVELGLAILDLTLEVADDAVAAADGVEGADVGLEDDGTHGLFLLEGVEVLDDLGDVADAEELVGVQELALPVVGEVWGKNAVRGALPA

Query:  LVFAGGAGLG----GGGGRRGGGRRRVGSAVVVGA
        LVFAGGAGLG    GGGG  GGG R+ G  V+  +
Subjt:  LVFAGGAGLG----GGGGRRGGGRRRVGSAVVVGA

A0A444CM14 Uncharacterized protein (Fragment)6.5e-2256.3Show/hide
Query:  SVDLADGELVEDDVELGLAILDLTLEVADDAVAAADGVEGADVGLEDDGTHGLFLLEGVEVLDDLGDVADAEELVGVQELALPVVGEVWGKNAVRGALPA
        S+  ADGEL + + EL    LDL LEVADDAVA ADG+E   +GL  DG HG  +L G+EV DD  DVADAE+ VGV+EL L V  +V G+ AV  AL A
Subjt:  SVDLADGELVEDDVELGLAILDLTLEVADDAVAAADGVEGADVGLEDDGTHGLFLLEGVEVLDDLGDVADAEELVGVQELALPVVGEVWGKNAVRGALPA

Query:  LVFAGGAGLG----GGGGRRGGGRRRVGSAVVVGA
        LVFAGGAGLG    GGGG  GGG R+ G  V+  +
Subjt:  LVFAGGAGLG----GGGGRRGGGRRRVGSAVVVGA

A5B4B4 Uncharacterized protein4.9e-2261.32Show/hide
Query:  ADGELVEDDVELGLAILDLTLEVADDAVAAADGVEGADVGLEDDGTHGLFLLEGVEVLDDLGDVADAEELVGVQELALPVVGEVWGKNAVRGALPALVFA
        A G+++ED VEL L +LDL LEV DD VA ADGV GADV LE+DG HGL L+  VEV DDLGDVAD ++ + V+ELAL  V ++ G+NAVRGA   LVFA
Subjt:  ADGELVEDDVELGLAILDLTLEVADDAVAAADGVEGADVGLEDDGTHGLFLLEGVEVLDDLGDVADAEELVGVQELALPVVGEVWGKNAVRGALPALVFA

Query:  GGAGLG
          A LG
Subjt:  GGAGLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGTGTTGACCTTGCAGATGGCGAGTTGGTGGAGGACGATGTCGAGCTCGGCCTTGCTATACTCGATCTGACGTTGGAGGTCGCGGATGATGCGGTAGCAGCCGC
CGACGGGGTCGAGGGAGCGGACGTCGGACTGGAAGATGATGGTACGCATGGCCTCTTCCTTCTCGAAGGGGTCGAGGTTCTTGATGATCTTGGTGATGTTGCTGACGCCG
AAGAGCTTGTGGGCGTTCAAGAATTGGCGCTGCCGGTCGTGGGGGAAGTATGGGGCAAGAATGCAGTCCGGGGCGCACTTCCGGCGCTGGTATTTGCAGGCGGCGCAGGC
CTGGGTGGTGGCGGAGGACGGCGCGGCGGAGGACGGCGGCGGGTGGGATCTGCTGTGGTGGTGGGTGCTGCTGCTGCTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAGTGTTGACCTTGCAGATGGCGAGTTGGTGGAGGACGATGTCGAGCTCGGCCTTGCTATACTCGATCTGACGTTGGAGGTCGCGGATGATGCGGTAGCAGCCGC
CGACGGGGTCGAGGGAGCGGACGTCGGACTGGAAGATGATGGTACGCATGGCCTCTTCCTTCTCGAAGGGGTCGAGGTTCTTGATGATCTTGGTGATGTTGCTGACGCCG
AAGAGCTTGTGGGCGTTCAAGAATTGGCGCTGCCGGTCGTGGGGGAAGTATGGGGCAAGAATGCAGTCCGGGGCGCACTTCCGGCGCTGGTATTTGCAGGCGGCGCAGGC
CTGGGTGGTGGCGGAGGACGGCGCGGCGGAGGACGGCGGCGGGTGGGATCTGCTGTGGTGGTGGGTGCTGCTGCTGCTCATTGA
Protein sequenceShow/hide protein sequence
MLSVDLADGELVEDDVELGLAILDLTLEVADDAVAAADGVEGADVGLEDDGTHGLFLLEGVEVLDDLGDVADAEELVGVQELALPVVGEVWGKNAVRGALPALVFAGGAG
LGGGGGRRGGGRRRVGSAVVVGAAAAH