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MS025800 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025800
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold813:3237277..3237714
RNA-Seq ExpressionMS025800
SyntenyMS025800
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143645.1 S-protein homolog 1-like [Momordica charantia]6.1e-4964.54Show/hide
Query:  MTMVLLVFWVVLVVVRPGVVALHLPMPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWV
        +T+V+ +   V  V++ G  A      L KW+IHVVNGLS   TLFVHCKSKDDDLG H+L+ RGDE QWTF++NFW TTLYWC++ KPNADVSF+SFWV
Subjt:  MTMVLLVFWVVLVVVRPGVVALHLPMPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWV

Query:  EKTHIWLTYRCKDGICIWTAKDDGIYLRNIPNNVDELVHKW
        E+TH+WL YRC D  CIWTAKDDGIYLRN P+ VDE +H+W
Subjt:  EKTHIWLTYRCKDGICIWTAKDDGIYLRNIPNNVDELVHKW

XP_022155194.1 S-protein homolog 1-like [Momordica charantia]2.4e-8299.3Show/hide
Query:  MVLLVFWVVLVVVRPGVVALHLPMPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEK
        MVLLVFWVVLVVVRPGVVALHLPMPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEK
Subjt:  MVLLVFWVVLVVVRPGVVALHLPMPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEK

Query:  THIWLTYRCKDGICIWTAKDDGIYLRNIPNNVDELVHKWNTKL
        THIWLTYRCKDGICIWTAKDDGIYLRNIPNN DELVHKWNTKL
Subjt:  THIWLTYRCKDGICIWTAKDDGIYLRNIPNNVDELVHKWNTKL

XP_022959899.1 S-protein homolog 1-like [Cucurbita moschata]9.7e-4768.1Show/hide
Query:  MPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGI
        +P+  W +HVVN L NNATLFVHCKSKDDDLG+H+L+G G E QW+F+ N W TTL+WC + KPNA VSF++FW+EKTHIWL YRC  G CIWTA+DDG+
Subjt:  MPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGI

Query:  YLRNIPNNVDELVHKW
        YLRN P++VDE VHKW
Subjt:  YLRNIPNNVDELVHKW

XP_023514588.1 S-protein homolog 1-like [Cucurbita pepo subsp. pepo]1.5e-4767.23Show/hide
Query:  MPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGI
        +P+ KW +HVVN L NNATLFVHCKSKDDDLG+H+L+G G E QW+F+ N W TTL+WC + KPNA VSF++FW+EKTHIWL YRC  G CIWTA++DG+
Subjt:  MPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGI

Query:  YLRNIPNNVDELVHKWNTK
        YLRN P++VDE VHKW  K
Subjt:  YLRNIPNNVDELVHKWNTK

XP_038896407.1 S-protein homolog 1-like [Benincasa hispida]7.9e-4970.59Show/hide
Query:  LPMPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDD
        +P+PL KW++HVVNGL  NATLFVHCKSKDDDLG  HL+  G E QW+F+IN W+TTLYWC +HKPNADVSFD+FWVE+ HIWL YRC +  C W AKDD
Subjt:  LPMPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDD

Query:  GIYLRNIPNNVDELVHKWN
        GIYLRN P+ VDE VHKW+
Subjt:  GIYLRNIPNNVDELVHKWN

TrEMBL top hitse value%identityAlignment
A0A1S3CEQ0 S-protein homolog1.5e-4563.38Show/hide
Query:  MTMVLLVFWVVLVVVRPGVVALHLPMPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWV
        + M LL+  V +V+V+P      +P+PL KW+IHVVNGL  N TLFVHCKSKDDDLG H L  +G E+QWTF++NF+ TTL+WC++ KPN  V+F+SFWV
Subjt:  MTMVLLVFWVVLVVVRPGVVALHLPMPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWV

Query:  EKTHIWLTYRCKDGICIWTAKDDGIYLRNIPNNVDELVHKWN
        EKTH WLT RC D  CIW AKDDGIYLRN   NVDELVH WN
Subjt:  EKTHIWLTYRCKDGICIWTAKDDGIYLRNIPNNVDELVHKWN

A0A6J1CPC6 S-protein homolog2.9e-4964.54Show/hide
Query:  MTMVLLVFWVVLVVVRPGVVALHLPMPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWV
        +T+V+ +   V  V++ G  A      L KW+IHVVNGLS   TLFVHCKSKDDDLG H+L+ RGDE QWTF++NFW TTLYWC++ KPNADVSF+SFWV
Subjt:  MTMVLLVFWVVLVVVRPGVVALHLPMPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWV

Query:  EKTHIWLTYRCKDGICIWTAKDDGIYLRNIPNNVDELVHKW
        E+TH+WL YRC D  CIWTAKDDGIYLRN P+ VDE +H+W
Subjt:  EKTHIWLTYRCKDGICIWTAKDDGIYLRNIPNNVDELVHKW

A0A6J1DPJ1 S-protein homolog1.2e-8299.3Show/hide
Query:  MVLLVFWVVLVVVRPGVVALHLPMPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEK
        MVLLVFWVVLVVVRPGVVALHLPMPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEK
Subjt:  MVLLVFWVVLVVVRPGVVALHLPMPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEK

Query:  THIWLTYRCKDGICIWTAKDDGIYLRNIPNNVDELVHKWNTKL
        THIWLTYRCKDGICIWTAKDDGIYLRNIPNN DELVHKWNTKL
Subjt:  THIWLTYRCKDGICIWTAKDDGIYLRNIPNNVDELVHKWNTKL

A0A6J1H9E9 S-protein homolog4.7e-4768.1Show/hide
Query:  MPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGI
        +P+  W +HVVN L NNATLFVHCKSKDDDLG+H+L+G G E QW+F+ N W TTL+WC + KPNA VSF++FW+EKTHIWL YRC  G CIWTA+DDG+
Subjt:  MPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGI

Query:  YLRNIPNNVDELVHKW
        YLRN P++VDE VHKW
Subjt:  YLRNIPNNVDELVHKW

A0A6J1L0E8 S-protein homolog1.0e-4664.84Show/hide
Query:  VVRPGVVALHLPMPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEKTHIWLTYRCKD
        + +P  +AL + +P+ KW +HVVN L NNATLFVHCKSKDDDLG+H+L+G G E QW+F+ N W TTL+WC + KPNA VSF++FW+EKTHIWL YRC  
Subjt:  VVRPGVVALHLPMPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEKTHIWLTYRCKD

Query:  GICIWTAKDDGIYLRNIPNNVDELVHKW
          CIWTAKDDG+YLRN P+ VDE VHKW
Subjt:  GICIWTAKDDGIYLRNIPNNVDELVHKW

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 23.6e-1231.93Show/hide
Query:  PLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGIY
        P  K  + + N L N  TL  HCKSKDDDLG +  +  G+   ++F   F+  TLY+C    PN   SFD  + +        +C+   C+W  + +G  
Subjt:  PLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGIY

Query:  LRNIPNNVDELVHKWNTKL
          N      +L + WN  L
Subjt:  LRNIPNNVDELVHKWNTKL

F4JLS0 S-protein homolog 17.8e-2342.98Show/hide
Query:  LDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGIYL
        + +W + VVNGL+   TLF+HCKSK+DDLG  +L  R +   W F  N   +T +WC+M+K N  ++ + FW +   + L +RC    CIWTAK DG+YL
Subjt:  LDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGIYL

Query:  RNIPNNVDELVHKW
         N  +  D L  KW
Subjt:  RNIPNNVDELVHKW

P0DN92 S-protein homolog 242.0e-1037.93Show/hide
Query:  NNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWC-FMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGIY
        N+  L +HCKS+DDDLG+ H++ +G+   W F +NF  +TLY+C F         F+ +   +      YRC +  C W A+ DGIY
Subjt:  NNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWC-FMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGIY

Q2HQ46 S-protein homolog 741.2e-2039.66Show/hide
Query:  LDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGIYL
        + +W + V NGL+   TLF+HCKSK++DLG  +L    D   W F  N   +TL+WC+M K +  ++   FW +   + L +RC    C+WTAK+DG+YL
Subjt:  LDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGIYL

Query:  RNIPNNVDELVHKWNT
         N     D L  KW +
Subjt:  RNIPNNVDELVHKWNT

Q9FI84 S-protein homolog 273.1e-1139.18Show/hide
Query:  SNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWC-FMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGIY-LRNIPNNV
        +N+  L +HCKSKDDDLG+ H+   G+   W F +NF  +TLY+C F    +    FD    E+      YRC++  C W AK D +Y   N+P  V
Subjt:  SNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWC-FMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGIY-LRNIPNNV

Arabidopsis top hitse value%identityAlignment
AT1G28305.1 Plant self-incompatibility protein S1 family1.7e-1236.67Show/hide
Query:  IHVVNGLSNN---ATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWC-FMHKPN--ADVSFDSFWVEKTHIWLTYRCKDGIC-----IWTAK
        +H+ N L  N   + LFV CKS   D+G H+ +  G   Q+  R NFWKTTL+WC F H P+      FD            Y  K G+       WTA+
Subjt:  IHVVNGLSNN---ATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWC-FMHKPN--ADVSFDSFWVEKTHIWLTYRCKDGIC-----IWTAK

Query:  DDGIYLRNIPNNVDELVHKW
        +DGIY R     + + VH W
Subjt:  DDGIYLRNIPNNVDELVHKW

AT4G16195.1 Plant self-incompatibility protein S1 family2.6e-1331.93Show/hide
Query:  PLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGIY
        P  K  + + N L N  TL  HCKSKDDDLG +  +  G+   ++F   F+  TLY+C    PN   SFD  + +        +C+   C+W  + +G  
Subjt:  PLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGIY

Query:  LRNIPNNVDELVHKWNTKL
          N      +L + WN  L
Subjt:  LRNIPNNVDELVHKWNTKL

AT4G16295.1 S-protein homologue 15.5e-2442.98Show/hide
Query:  LDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGIYL
        + +W + VVNGL+   TLF+HCKSK+DDLG  +L  R +   W F  N   +T +WC+M+K N  ++ + FW +   + L +RC    CIWTAK DG+YL
Subjt:  LDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGIYL

Query:  RNIPNNVDELVHKW
         N  +  D L  KW
Subjt:  RNIPNNVDELVHKW

AT4G29035.1 Plant self-incompatibility protein S1 family8.8e-2239.66Show/hide
Query:  LDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGIYL
        + +W + V NGL+   TLF+HCKSK++DLG  +L    D   W F  N   +TL+WC+M K +  ++   FW +   + L +RC    C+WTAK+DG+YL
Subjt:  LDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGIYL

Query:  RNIPNNVDELVHKWNT
         N     D L  KW +
Subjt:  RNIPNNVDELVHKWNT

AT5G06020.1 Plant self-incompatibility protein S1 family2.2e-1239.18Show/hide
Query:  SNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWC-FMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGIY-LRNIPNNV
        +N+  L +HCKSKDDDLG+ H+   G+   W F +NF  +TLY+C F    +    FD    E+      YRC++  C W AK D +Y   N+P  V
Subjt:  SNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWC-FMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGIY-LRNIPNNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAATGGTTCTCTTAGTTTTCTGGGTGGTTCTAGTGGTGGTTCGACCCGGTGTGGTAGCGTTGCATCTTCCAATGCCACTCGATAAATGGAATATTCACGTGGTTAA
TGGATTGAGTAATAACGCCACCTTGTTCGTGCATTGTAAGTCTAAGGATGATGATCTAGGTTACCATCACCTAATTGGTCGTGGTGATGAGCTTCAATGGACTTTTAGGA
TCAACTTCTGGAAAACAACGTTGTATTGGTGTTTCATGCACAAGCCCAATGCTGATGTGTCGTTTGACTCATTCTGGGTTGAGAAGACCCATATATGGCTCACGTATAGG
TGCAAAGATGGGATCTGCATTTGGACTGCTAAAGATGATGGAATTTACTTAAGAAACATTCCTAATAATGTTGATGAGCTTGTTCATAAATGGAACACGAAGCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACAATGGTTCTCTTAGTTTTCTGGGTGGTTCTAGTGGTGGTTCGACCCGGTGTGGTAGCGTTGCATCTTCCAATGCCACTCGATAAATGGAATATTCACGTGGTTAA
TGGATTGAGTAATAACGCCACCTTGTTCGTGCATTGTAAGTCTAAGGATGATGATCTAGGTTACCATCACCTAATTGGTCGTGGTGATGAGCTTCAATGGACTTTTAGGA
TCAACTTCTGGAAAACAACGTTGTATTGGTGTTTCATGCACAAGCCCAATGCTGATGTGTCGTTTGACTCATTCTGGGTTGAGAAGACCCATATATGGCTCACGTATAGG
TGCAAAGATGGGATCTGCATTTGGACTGCTAAAGATGATGGAATTTACTTAAGAAACATTCCTAATAATGTTGATGAGCTTGTTCATAAATGGAACACGAAGCTGTAG
Protein sequenceShow/hide protein sequence
MTMVLLVFWVVLVVVRPGVVALHLPMPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYWCFMHKPNADVSFDSFWVEKTHIWLTYR
CKDGICIWTAKDDGIYLRNIPNNVDELVHKWNTKL