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MS025801 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025801
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold813:3239350..3239787
RNA-Seq ExpressionMS025801
SyntenyMS025801
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008461539.1 PREDICTED: uncharacterized protein LOC103500111 [Cucumis melo]5.2e-4866.67Show/hide
Query:  LLIFLVALVLVRPGAVATPLLLPFERWHIHVVNGLSNATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHM
        LL+ LVA+VLV+P   +T + LP  +WHIHVVNGL N TLFVHCKSKDDDLG+H L  +G E QWTFK NF+ TTL+WC++ KPN  V+F+SFW+EK H 
Subjt:  LLIFLVALVLVRPGAVATPLLLPFERWHIHVVNGLSNATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHM

Query:  WLNYRCTDKNCIWIAKDDGIYLRNNPDNYDEFVKPWVK
        WL  RC DKNCIWIAKDDGIYLRNN  N DE V PW K
Subjt:  WLNYRCTDKNCIWIAKDDGIYLRNNPDNYDEFVKPWVK

XP_022143645.1 S-protein homolog 1-like [Momordica charantia]4.5e-5266.67Show/hide
Query:  LLIFLV----ALVLVRPGAVATPLLLPFERWHIHVVNGLSNATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIE
        ++IFLV    A++ +   A  +  LLP  +WHIHVVNGLS  TLFVHCKSKDDDLG HNL+ RGDEFQWTF+ NFW TTLYWC++ KPNADVSF+SFW+E
Subjt:  LLIFLV----ALVLVRPGAVATPLLLPFERWHIHVVNGLSNATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIE

Query:  KRHMWLNYRCTDKNCIWIAKDDGIYLRNNPDNYDEFVKPWVKKS
        + HMWL YRCTDKNCIW AKDDGIYLRNNPD  DE +  W+ ++
Subjt:  KRHMWLNYRCTDKNCIWIAKDDGIYLRNNPDNYDEFVKPWVKKS

XP_022155194.1 S-protein homolog 1-like [Momordica charantia]2.3e-5673.76Show/hide
Query:  VLLIFLVALVLVRPGAVATPLLLPFERWHIHVVNGLS-NATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKR
        VLL+F V LV+VRPG VA  L +P ++W+IHVVNGLS NATLFVHCKSKDDDLG H+L+GRGDE QWTF+ NFW TTLYWCFMHKPNADVSFDSFW+EK 
Subjt:  VLLIFLVALVLVRPGAVATPLLLPFERWHIHVVNGLS-NATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKR

Query:  HMWLNYRCTDKNCIWIAKDDGIYLRNNPDNYDEFVKPWVKK
        H+WL YRC D  CIW AKDDGIYLRN P+N DE V  W  K
Subjt:  HMWLNYRCTDKNCIWIAKDDGIYLRNNPDNYDEFVKPWVKK

XP_023004728.1 S-protein homolog 1-like [Cucurbita maxima]1.1e-4764.44Show/hide
Query:  LIFLVALVLVRPGAVATPLLLPFERWHIHVVNGLSNATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHMW
        L+ L+A  L +P A+A   ++P ++W +HVVN L+NATLFVHCKSKDDDLG HNL+G G EFQW+FK N W TTL+WC + KPNA VSF++FWIEK H+W
Subjt:  LIFLVALVLVRPGAVATPLLLPFERWHIHVVNGLSNATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHMW

Query:  LNYRCTDKNCIWIAKDDGIYLRNNPDNYDEFVKPW
        LNYRC  +NCIW AKDDG+YLRNNPD  DE V  W
Subjt:  LNYRCTDKNCIWIAKDDGIYLRNNPDNYDEFVKPW

XP_038896407.1 S-protein homolog 1-like [Benincasa hispida]1.4e-5063.64Show/hide
Query:  MTRVLLIFLVALVLVRPG---AVATPLLLPFERWHIHVVNGLSNATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSF
        M  V  + L+ LVL++     A   P+ LP ++WH+HVVNGL NATLFVHCKSKDDDLG  +L+  G EFQW+FK N W TTLYWC +HKPNADVSFD+F
Subjt:  MTRVLLIFLVALVLVRPG---AVATPLLLPFERWHIHVVNGLSNATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSF

Query:  WIEKRHMWLNYRCTDKNCIWIAKDDGIYLRNNPDNYDEFVKPW
        W+E+RH+WL+YRC ++NC W+AKDDGIYLRNNPD  DEFV  W
Subjt:  WIEKRHMWLNYRCTDKNCIWIAKDDGIYLRNNPDNYDEFVKPW

TrEMBL top hitse value%identityAlignment
A0A1S3CEQ0 S-protein homolog2.5e-4866.67Show/hide
Query:  LLIFLVALVLVRPGAVATPLLLPFERWHIHVVNGLSNATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHM
        LL+ LVA+VLV+P   +T + LP  +WHIHVVNGL N TLFVHCKSKDDDLG+H L  +G E QWTFK NF+ TTL+WC++ KPN  V+F+SFW+EK H 
Subjt:  LLIFLVALVLVRPGAVATPLLLPFERWHIHVVNGLSNATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHM

Query:  WLNYRCTDKNCIWIAKDDGIYLRNNPDNYDEFVKPWVK
        WL  RC DKNCIWIAKDDGIYLRNN  N DE V PW K
Subjt:  WLNYRCTDKNCIWIAKDDGIYLRNNPDNYDEFVKPWVK

A0A6J1CPC6 S-protein homolog2.2e-5266.67Show/hide
Query:  LLIFLV----ALVLVRPGAVATPLLLPFERWHIHVVNGLSNATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIE
        ++IFLV    A++ +   A  +  LLP  +WHIHVVNGLS  TLFVHCKSKDDDLG HNL+ RGDEFQWTF+ NFW TTLYWC++ KPNADVSF+SFW+E
Subjt:  LLIFLV----ALVLVRPGAVATPLLLPFERWHIHVVNGLSNATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIE

Query:  KRHMWLNYRCTDKNCIWIAKDDGIYLRNNPDNYDEFVKPWVKKS
        + HMWL YRCTDKNCIW AKDDGIYLRNNPD  DE +  W+ ++
Subjt:  KRHMWLNYRCTDKNCIWIAKDDGIYLRNNPDNYDEFVKPWVKKS

A0A6J1DPJ1 S-protein homolog1.1e-5673.76Show/hide
Query:  VLLIFLVALVLVRPGAVATPLLLPFERWHIHVVNGLS-NATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKR
        VLL+F V LV+VRPG VA  L +P ++W+IHVVNGLS NATLFVHCKSKDDDLG H+L+GRGDE QWTF+ NFW TTLYWCFMHKPNADVSFDSFW+EK 
Subjt:  VLLIFLVALVLVRPGAVATPLLLPFERWHIHVVNGLS-NATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKR

Query:  HMWLNYRCTDKNCIWIAKDDGIYLRNNPDNYDEFVKPWVKK
        H+WL YRC D  CIW AKDDGIYLRN P+N DE V  W  K
Subjt:  HMWLNYRCTDKNCIWIAKDDGIYLRNNPDNYDEFVKPWVKK

A0A6J1H9E9 S-protein homolog4.7e-4763.7Show/hide
Query:  LIFLVALVLVRPGAVATPLLLPFERWHIHVVNGLSNATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHMW
        L+ L+A  L +P A+A   ++P + W +HVVN L+NATLFVHCKSKDDDLG HNL+G G EFQW+FK N W TTL+WC + KPNA VSF++FWIEK H+W
Subjt:  LIFLVALVLVRPGAVATPLLLPFERWHIHVVNGLSNATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHMW

Query:  LNYRCTDKNCIWIAKDDGIYLRNNPDNYDEFVKPW
        LNYRC   NCIW A+DDG+YLRNNPD+ DE V  W
Subjt:  LNYRCTDKNCIWIAKDDGIYLRNNPDNYDEFVKPW

A0A6J1L0E8 S-protein homolog5.6e-4864.44Show/hide
Query:  LIFLVALVLVRPGAVATPLLLPFERWHIHVVNGLSNATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHMW
        L+ L+A  L +P A+A   ++P ++W +HVVN L+NATLFVHCKSKDDDLG HNL+G G EFQW+FK N W TTL+WC + KPNA VSF++FWIEK H+W
Subjt:  LIFLVALVLVRPGAVATPLLLPFERWHIHVVNGLSNATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHMW

Query:  LNYRCTDKNCIWIAKDDGIYLRNNPDNYDEFVKPW
        LNYRC  +NCIW AKDDG+YLRNNPD  DE V  W
Subjt:  LNYRCTDKNCIWIAKDDGIYLRNNPDNYDEFVKPW

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 28.9e-1131.71Show/hide
Query:  ATPLLLPFERWHIHVVNGLSN-ATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHMWLNYRCTDKNCIWIA
        +T  + P  +  + + N L N  TL  HCKSKDDDLG+   L  G+ + ++F   F+  TLY+C    PN   SFD  + + R    + +C    C+W  
Subjt:  ATPLLLPFERWHIHVVNGLSN-ATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHMWLNYRCTDKNCIWIA

Query:  KDDGIYLRNNPDNYDEFVKPWVK
        + +G    N+     +   PW K
Subjt:  KDDGIYLRNNPDNYDEFVKPWVK

F4JLS0 S-protein homolog 17.8e-2341.6Show/hide
Query:  GAVATPLLLP-FERWHIHVVNGLSNA-TLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHMWLNYRCTDKNC
        G     +++P    W + VVNGL+   TLF+HCKSK+DDLG+ NL  R + F W F  N   +T +WC+M+K N  ++ + FW +   + L +RC  KNC
Subjt:  GAVATPLLLP-FERWHIHVVNGLSNA-TLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHMWLNYRCTDKNC

Query:  IWIAKDDGIYLRNNPDNYDEFVKPW
        IW AK DG+YL N+    D   + W
Subjt:  IWIAKDDGIYLRNNPDNYDEFVKPW

P0DN93 S-protein homolog 299.2e-0830.77Show/hide
Query:  PFERWHIHVVNGLS-NATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEK--RHMWLNYRCTDKNCIWIAKDDG
        PF +  + V N +S   TL + C+SKDDDLG+H LL  G  F W F+ +++ TTL+ C     N    FD++  ++   H +        +C W    D 
Subjt:  PFERWHIHVVNGLS-NATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEK--RHMWLNYRCTDKNCIWIAKDDG

Query:  IYLRNNPDNYDEFVKPW
          +  N +   +   PW
Subjt:  IYLRNNPDNYDEFVKPW

Q2HQ46 S-protein homolog 747.3e-2139.53Show/hide
Query:  VLVRPGAVATPLLLPFERWHIHVVNGLSNA-TLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHMWLNYRCT
        VL R       ++     W + V NGL+   TLF+HCKSK++DLGD NL    D F W F  N   +TL+WC+M K +  ++   FW +   + L +RC 
Subjt:  VLVRPGAVATPLLLPFERWHIHVVNGLSNA-TLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHMWLNYRCT

Query:  DKNCIWIAKDDGIYLRNNPDNYDEFVKPW
         KNC+W AK+DG+YL N+    D   + W
Subjt:  DKNCIWIAKDDGIYLRNNPDNYDEFVKPW

Q9LW22 S-protein homolog 214.6e-0732.63Show/hide
Query:  VNGLSNATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHMWLNYRCTDKNCI-WIAKDDGIYLRNN
        +N  +   L VHCKSK++D+G    L  G+   ++FKTNFW TT +WC ++K      +  +     +  +     D +   W+A+DDGIY   +
Subjt:  VNGLSNATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHMWLNYRCTDKNCI-WIAKDDGIYLRNN

Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family6.3e-1231.71Show/hide
Query:  ATPLLLPFERWHIHVVNGLSN-ATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHMWLNYRCTDKNCIWIA
        +T  + P  +  + + N L N  TL  HCKSKDDDLG+   L  G+ + ++F   F+  TLY+C    PN   SFD  + + R    + +C    C+W  
Subjt:  ATPLLLPFERWHIHVVNGLSN-ATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHMWLNYRCTDKNCIWIA

Query:  KDDGIYLRNNPDNYDEFVKPWVK
        + +G    N+     +   PW K
Subjt:  KDDGIYLRNNPDNYDEFVKPWVK

AT4G16295.1 S-protein homologue 15.5e-2441.6Show/hide
Query:  GAVATPLLLP-FERWHIHVVNGLSNA-TLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHMWLNYRCTDKNC
        G     +++P    W + VVNGL+   TLF+HCKSK+DDLG+ NL  R + F W F  N   +T +WC+M+K N  ++ + FW +   + L +RC  KNC
Subjt:  GAVATPLLLP-FERWHIHVVNGLSNA-TLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHMWLNYRCTDKNC

Query:  IWIAKDDGIYLRNNPDNYDEFVKPW
        IW AK DG+YL N+    D   + W
Subjt:  IWIAKDDGIYLRNNPDNYDEFVKPW

AT4G29035.1 Plant self-incompatibility protein S1 family5.2e-2239.53Show/hide
Query:  VLVRPGAVATPLLLPFERWHIHVVNGLSNA-TLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHMWLNYRCT
        VL R       ++     W + V NGL+   TLF+HCKSK++DLGD NL    D F W F  N   +TL+WC+M K +  ++   FW +   + L +RC 
Subjt:  VLVRPGAVATPLLLPFERWHIHVVNGLSNA-TLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHMWLNYRCT

Query:  DKNCIWIAKDDGIYLRNNPDNYDEFVKPW
         KNC+W AK+DG+YL N+    D   + W
Subjt:  DKNCIWIAKDDGIYLRNNPDNYDEFVKPW

AT5G04347.1 Plant self-incompatibility protein S1 family6.3e-1236.04Show/hide
Query:  VVNGLSNATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKP---NADVSFDSFWIEKRHMWLNYRCTDKNCIWIAKDDGIYLRNNPD
        V N L+N  L V C+SKDD+LGDH +L  G   +  F  N W  TL+WC + K       V+FD++    R  W          +WIA++DGIY   +P+
Subjt:  VVNGLSNATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKP---NADVSFDSFWIEKRHMWLNYRCTDKNCIWIAKDDGIYLRNNPD

Query:  NYDEFVKPWVK
           +    W K
Subjt:  NYDEFVKPWVK

AT5G04350.1 Plant self-incompatibility protein S1 family9.2e-1139.76Show/hide
Query:  LFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHK-PNADVSFDSFWIEKRHMWLNYRCTDKNCIWIAKDDGIY
        L VHC+SKDDDLG+H +L  G ++++TF  N W TT + C M + PN     D  ++     W   +  + +C WI ++DGIY
Subjt:  LFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHK-PNADVSFDSFWIEKRHMWLNYRCTDKNCIWIAKDDGIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAGGGTTCTCTTAATTTTCTTGGTGGCTCTAGTGCTGGTTCGACCCGGAGCGGTGGCGACCCCTCTTCTGTTGCCATTCGAAAGATGGCATATCCATGTGGTTAA
TGGGTTGAGCAACGCCACCTTGTTTGTGCATTGTAAGTCGAAGGACGATGATTTGGGTGACCATAACCTACTTGGACGTGGTGATGAGTTTCAATGGACTTTTAAGACCA
ACTTTTGGATGACAACGTTGTATTGGTGTTTTATGCACAAGCCGAATGCTGATGTGTCATTTGATTCATTCTGGATTGAGAAGAGGCATATGTGGCTCAATTATAGATGC
ACGGATAAAAATTGCATTTGGATTGCTAAAGATGACGGAATTTACCTGAGAAACAATCCCGATAATTATGATGAGTTTGTTAAACCCTGGGTCAAGAAGAGTAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCAGGGTTCTCTTAATTTTCTTGGTGGCTCTAGTGCTGGTTCGACCCGGAGCGGTGGCGACCCCTCTTCTGTTGCCATTCGAAAGATGGCATATCCATGTGGTTAA
TGGGTTGAGCAACGCCACCTTGTTTGTGCATTGTAAGTCGAAGGACGATGATTTGGGTGACCATAACCTACTTGGACGTGGTGATGAGTTTCAATGGACTTTTAAGACCA
ACTTTTGGATGACAACGTTGTATTGGTGTTTTATGCACAAGCCGAATGCTGATGTGTCATTTGATTCATTCTGGATTGAGAAGAGGCATATGTGGCTCAATTATAGATGC
ACGGATAAAAATTGCATTTGGATTGCTAAAGATGACGGAATTTACCTGAGAAACAATCCCGATAATTATGATGAGTTTGTTAAACCCTGGGTCAAGAAGAGTAGTTGA
Protein sequenceShow/hide protein sequence
MTRVLLIFLVALVLVRPGAVATPLLLPFERWHIHVVNGLSNATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHMWLNYRC
TDKNCIWIAKDDGIYLRNNPDNYDEFVKPWVKKSS