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MS025841 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025841
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold173:243233..243571
RNA-Seq ExpressionMS025841
SyntenyMS025841
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154166.1 putative protein TPRXL [Momordica charantia]1.5e-3487.93Show/hide
Query:  MARQSVFVLALIFAAVVGAVAQAPATSPTGSPTLISSSSGSASS----SPTASSEASSQSSVSASDPSSTAPMSSLGSYPSIASSPTGETPASSPSQAPT
        MARQS+FVL LIF AVVGAVAQAPATSPT SPTLISSSSG ASS    SPTASSEASSQSSVSAS PSS A MSSLGSYPSIASSPTGETPASSPS+APT
Subjt:  MARQSVFVLALIFAAVVGAVAQAPATSPTGSPTLISSSSGSASS----SPTASSEASSQSSVSASDPSSTAPMSSLGSYPSIASSPTGETPASSPSQAPT

Query:  GSPFVARRLFGNYFLG
        GSPFVAR+LFGNYFLG
Subjt:  GSPFVARRLFGNYFLG
TrEMBL top hitse value%identityAlignment
A0A6J1DMX5 Uncharacterized protein7.1e-3587.93Show/hide
Query:  MARQSVFVLALIFAAVVGAVAQAPATSPTGSPTLISSSSGSASS----SPTASSEASSQSSVSASDPSSTAPMSSLGSYPSIASSPTGETPASSPSQAPT
        MARQS+FVL LIF AVVGAVAQAPATSPT SPTLISSSSG ASS    SPTASSEASSQSSVSAS PSS A MSSLGSYPSIASSPTGETPASSPS+APT
Subjt:  MARQSVFVLALIFAAVVGAVAQAPATSPTGSPTLISSSSGSASS----SPTASSEASSQSSVSASDPSSTAPMSSLGSYPSIASSPTGETPASSPSQAPT

Query:  GSPFVARRLFGNYFLG
        GSPFVAR+LFGNYFLG
Subjt:  GSPFVARRLFGNYFLG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCGTCAATCTGTTTTTGTTCTTGCTCTCATCTTCGCCGCTGTTGTCGGTGCTGTTGCTCAAGCTCCGGCAACCTCCCCCACTGGTTCTCCAACGCTGATCAGCTC
GTCGTCTGGTTCCGCCTCATCTTCTCCGACCGCCTCTTCAGAGGCTTCATCGCAGTCGTCTGTATCAGCATCTGATCCGTCGTCGACGGCTCCGATGAGCTCGCTTGGTT
CTTACCCTTCCATAGCTTCTTCGCCGACCGGCGAGACTCCGGCCAGTTCTCCTTCTCAGGCTCCGACCGGCTCCCCTTTCGTGGCTCGTAGATTGTTTGGAAATTATTTT
CTTGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCGTCAATCTGTTTTTGTTCTTGCTCTCATCTTCGCCGCTGTTGTCGGTGCTGTTGCTCAAGCTCCGGCAACCTCCCCCACTGGTTCTCCAACGCTGATCAGCTC
GTCGTCTGGTTCCGCCTCATCTTCTCCGACCGCCTCTTCAGAGGCTTCATCGCAGTCGTCTGTATCAGCATCTGATCCGTCGTCGACGGCTCCGATGAGCTCGCTTGGTT
CTTACCCTTCCATAGCTTCTTCGCCGACCGGCGAGACTCCGGCCAGTTCTCCTTCTCAGGCTCCGACCGGCTCCCCTTTCGTGGCTCGTAGATTGTTTGGAAATTATTTT
CTTGGCTGA
Protein sequenceShow/hide protein sequence
MARQSVFVLALIFAAVVGAVAQAPATSPTGSPTLISSSSGSASSSPTASSEASSQSSVSASDPSSTAPMSSLGSYPSIASSPTGETPASSPSQAPTGSPFVARRLFGNYF
LG