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MS025844 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025844
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTranscription factor GTE9 isoform X4
Genome locationscaffold173:669431..671280
RNA-Seq ExpressionMS025844
SyntenyMS025844
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061663.1 transcription factor GTE9 isoform X4 [Cucumis melo var. makuwa]1.8e-1638.35Show/hide
Query:  TPTSITTPRHISTPPSPTTAARVTMLKARFADTILKAQRQLCIND-VPCAVKPDVIEKLVVKPST-IEKLRRAAREAL--EEVERTVEVEDSHKSLKDLE
        TPT  TTP   +   +     RV+MLK RFA TILKAQ+QL   + + C V+      L   P+T +++ R A REAL  ++   T   ++S++ L+ + 
Subjt:  TPTSITTPRHISTPPSPTTAARVTMLKARFADTILKAQRQLCIND-VPCAVKPDVIEKLVVKPST-IEKLRRAAREAL--EEVERTVEVEDSHKSLKDLE

Query:  RLCGFPIPSCDGFLDTMHFYGLYLKNDNSEPCAMELNTIETQVVKPATIEEIRHAAREALEEIERTVEVEDSHKSFKDLERLCGFSIPSCDGFLDTMHLY
        +    P P                                     P++ EEIR AAR ALEE+ER+V++EDSHKS KDLERLCG+ IP   GF + M  Y
Subjt:  RLCGFPIPSCDGFLDTMHFYGLYLKNDNSEPCAMELNTIETQVVKPATIEEIRHAAREALEEIERTVEVEDSHKSFKDLERLCGFSIPSCDGFLDTMHLY

Query:  GLYLKN
        GLYLKN
Subjt:  GLYLKN

KAG6571342.1 hypothetical protein SDJN03_30257, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1238.55Show/hide
Query:  AKIPQTPTEATTSTPTSITTPRHISTPPSPTTAA----RVTMLKARFADTILKAQRQLCIN---------------------------DVPCAVKPDVIE
        AK P      T+ T      P  I   P+P++++    R  +LK +FA TI KAQR L  N                            +  +++ D I 
Subjt:  AKIPQTPTEATTSTPTSITTPRHISTPPSPTTAA----RVTMLKARFADTILKAQRQLCIN---------------------------DVPCAVKPDVIE

Query:  KLVVKPSTIEKLRRAAREALEEVERTVEVEDSHKSLKDLERLCGFPIPSCDGFLDTMHFYGLYLKN
         L V+    E++R AAR  LEEVER V V+DSH SL++ ERLCGFPIP   GFL+ MH+YGLYLK+
Subjt:  KLVVKPSTIEKLRRAAREALEEVERTVEVEDSHKSLKDLERLCGFPIPSCDGFLDTMHFYGLYLKN

XP_031119736.1 transcription factor GTE12-like [Ipomoea triloba]9.1e-0534.9Show/hide
Query:  SPTTAARVTMLKARFADTILKAQRQLCI--NDVPCAVKPDVIEKLVVKPSTIEKL---------------------------RRAAREALEEVERTVEVE
        SPT A R  MLK+RFA+TI KA+ Q+ +   D    +K     + + K    EK                            R AAR ALE++E+TVE E
Subjt:  SPTTAARVTMLKARFADTILKAQRQLCI--NDVPCAVKPDVIEKLVVKPSTIEKL---------------------------RRAAREALEEVERTVEVE

Query:  DSHKSLKDLERLCGFPIPSCDGFLDT------------MHFYGLYLKND
        D+ K LKDLERLC  P P  D  L +            +   GLY+K D
Subjt:  DSHKSLKDLERLCGFPIPSCDGFLDT------------MHFYGLYLKND

TrEMBL top hitse value%identityAlignment
A0A0A0KGL2 Uncharacterized protein1.4e-1439.29Show/hide
Query:  VAKIPQTPTEATTSTPTSITTPRHISTPPSPTTAARVTMLKARFADTILKAQRQLCINDVPCAVKPDVIEKLVVKP--STIEKLRRAAREALEEVERTVE
        V  I + P +A   TPT  TTP  ++         RV+MLK+RFA TILKAQ+QL         K   +EK    P  + +E+ R A REA         
Subjt:  VAKIPQTPTEATTSTPTSITTPRHISTPPSPTTAARVTMLKARFADTILKAQRQLCINDVPCAVKPDVIEKLVVKP--STIEKLRRAAREALEEVERTVE

Query:  VEDSHKSLKDLERLCGFPIPSCDGFLDTMHFYGLYLKNDNSEPCAMELNTIETQVVK-PAT-----IEEIRHAAREALEEIERTVEVEDSHKSFKDLERL
           S ++ K        P  +      T         N N EP    +     + +K P T      EEIR AAR+ALE++ER+V+VEDSHKS KDLERL
Subjt:  VEDSHKSLKDLERLCGFPIPSCDGFLDTMHFYGLYLKNDNSEPCAMELNTIETQVVK-PAT-----IEEIRHAAREALEEIERTVEVEDSHKSFKDLERL

Query:  CGFSIPSCDGFLDTMHLYGLYLKN
        CG+ IPS  GF + M  YGLYLKN
Subjt:  CGFSIPSCDGFLDTMHLYGLYLKN

A0A5D3DC97 Transcription factor GTE9 isoform X48.6e-1738.35Show/hide
Query:  TPTSITTPRHISTPPSPTTAARVTMLKARFADTILKAQRQLCIND-VPCAVKPDVIEKLVVKPST-IEKLRRAAREAL--EEVERTVEVEDSHKSLKDLE
        TPT  TTP   +   +     RV+MLK RFA TILKAQ+QL   + + C V+      L   P+T +++ R A REAL  ++   T   ++S++ L+ + 
Subjt:  TPTSITTPRHISTPPSPTTAARVTMLKARFADTILKAQRQLCIND-VPCAVKPDVIEKLVVKPST-IEKLRRAAREAL--EEVERTVEVEDSHKSLKDLE

Query:  RLCGFPIPSCDGFLDTMHFYGLYLKNDNSEPCAMELNTIETQVVKPATIEEIRHAAREALEEIERTVEVEDSHKSFKDLERLCGFSIPSCDGFLDTMHLY
        +    P P                                     P++ EEIR AAR ALEE+ER+V++EDSHKS KDLERLCG+ IP   GF + M  Y
Subjt:  RLCGFPIPSCDGFLDTMHFYGLYLKNDNSEPCAMELNTIETQVVKPATIEEIRHAAREALEEIERTVEVEDSHKSFKDLERLCGFSIPSCDGFLDTMHLY

Query:  GLYLKN
        GLYLKN
Subjt:  GLYLKN

A0A6A4PI18 Putative chromatin remodeler Bromodomain family4.9e-0437.29Show/hide
Query:  QTPTEATTSTPTSITTPRHISTPPSPTTAARVTMLKARFADTILKAQRQLCIN----DVPCAVKPDVIEKLVVKPSTIE-----KLRRAAREALEEVERT
        Q  T AT ++   + +        SP  A R  MLK+RFADTILKAQ++  ++      P  ++ +   ++  +  + E     K R AAR ALE++ER+
Subjt:  QTPTEATTSTPTSITTPRHISTPPSPTTAARVTMLKARFADTILKAQRQLCIN----DVPCAVKPDVIEKLVVKPSTIE-----KLRRAAREALEEVERT

Query:  VEVEDSHKSLKDLERLCG
        VEVE++ + LK+LE LCG
Subjt:  VEVEDSHKSLKDLERLCG

A0A6A5NJM1 Bromo domain-containing protein4.9e-0437.29Show/hide
Query:  QTPTEATTSTPTSITTPRHISTPPSPTTAARVTMLKARFADTILKAQRQLCIN----DVPCAVKPDVIEKLVVKPSTIE-----KLRRAAREALEEVERT
        Q  T AT ++   + +        SP  A R  MLK+RFADTILKAQ++  ++      P  ++ +   ++  +  + E     K R AAR ALE++ER+
Subjt:  QTPTEATTSTPTSITTPRHISTPPSPTTAARVTMLKARFADTILKAQRQLCIN----DVPCAVKPDVIEKLVVKPSTIE-----KLRRAAREALEEVERT

Query:  VEVEDSHKSLKDLERLCG
        VEVE++ + LK+LE LCG
Subjt:  VEVEDSHKSLKDLERLCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGTGTTGAGAAAGATGTTTCGTATTTAAGAGGCCTTCTTCTATGCGAAAGATTGACTGCTAAACCACCAAAGAAGAAGTTGATCCAGAAAGGGATCTCCATGAA
ATCTTATAATCGTATTTTCGCGTCAGAGAAACTAGGCAATGTAAAGTCAAAGACAAAAAGGGCTATGATGAAGGCAAAACCTCGAGAAGCTTTTTGCGACCATTTGGTAG
CAAAGACTATATCGGTGAGTTCTGGGCCAGTGAAACCGCAACTAGTTTCTTATGCTGATTTGGCAGCAAATACAGAGAAATGTGGAGATTTGGTTGCAAAGATACCACAA
ACACCAACTGAAGCCACAACTTCAACACCAACCTCAATCACAACACCACGGCACATTAGTACTCCACCCTCACCAACCACAGCTGCTCGAGTAACAATGTTGAAAGCAAG
GTTCGCCGATACGATCTTGAAAGCACAGCGGCAGCTTTGCATCAATGATGTGCCATGTGCTGTGAAGCCGGATGTGATTGAAAAATTAGTTGTTAAGCCATCTACAATTG
AAAAACTGAGGCGAGCAGCGCGAGAAGCTTTGGAGGAGGTGGAACGAACTGTGGAGGTGGAAGATAGCCATAAATCCCTCAAAGATTTAGAGCGCCTTTGTGGATTTCCC
ATACCTTCCTGTGATGGATTCCTCGACACCATGCACTTCTATGGTTTATATTTGAAGAATGACAATAGTGAACCATGTGCTATGGAACTAAATACAATTGAAACACAAGT
TGTGAAACCAGCTACGATTGAAGAAATAAGACATGCAGCTCGAGAAGCTTTGGAGGAAATCGAACGGACTGTGGAGGTGGAAGATAGCCATAAATCGTTCAAAGATTTGG
AGCGCCTTTGTGGATTTTCCATACCTTCCTGTGATGGATTCCTCGATACCATGCACTTGTATGGTTTATATTTGAAGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGGTGTTGAGAAAGATGTTTCGTATTTAAGAGGCCTTCTTCTATGCGAAAGATTGACTGCTAAACCACCAAAGAAGAAGTTGATCCAGAAAGGGATCTCCATGAA
ATCTTATAATCGTATTTTCGCGTCAGAGAAACTAGGCAATGTAAAGTCAAAGACAAAAAGGGCTATGATGAAGGCAAAACCTCGAGAAGCTTTTTGCGACCATTTGGTAG
CAAAGACTATATCGGTGAGTTCTGGGCCAGTGAAACCGCAACTAGTTTCTTATGCTGATTTGGCAGCAAATACAGAGAAATGTGGAGATTTGGTTGCAAAGATACCACAA
ACACCAACTGAAGCCACAACTTCAACACCAACCTCAATCACAACACCACGGCACATTAGTACTCCACCCTCACCAACCACAGCTGCTCGAGTAACAATGTTGAAAGCAAG
GTTCGCCGATACGATCTTGAAAGCACAGCGGCAGCTTTGCATCAATGATGTGCCATGTGCTGTGAAGCCGGATGTGATTGAAAAATTAGTTGTTAAGCCATCTACAATTG
AAAAACTGAGGCGAGCAGCGCGAGAAGCTTTGGAGGAGGTGGAACGAACTGTGGAGGTGGAAGATAGCCATAAATCCCTCAAAGATTTAGAGCGCCTTTGTGGATTTCCC
ATACCTTCCTGTGATGGATTCCTCGACACCATGCACTTCTATGGTTTATATTTGAAGAATGACAATAGTGAACCATGTGCTATGGAACTAAATACAATTGAAACACAAGT
TGTGAAACCAGCTACGATTGAAGAAATAAGACATGCAGCTCGAGAAGCTTTGGAGGAAATCGAACGGACTGTGGAGGTGGAAGATAGCCATAAATCGTTCAAAGATTTGG
AGCGCCTTTGTGGATTTTCCATACCTTCCTGTGATGGATTCCTCGATACCATGCACTTGTATGGTTTATATTTGAAGAATTAG
Protein sequenceShow/hide protein sequence
MKGVEKDVSYLRGLLLCERLTAKPPKKKLIQKGISMKSYNRIFASEKLGNVKSKTKRAMMKAKPREAFCDHLVAKTISVSSGPVKPQLVSYADLAANTEKCGDLVAKIPQ
TPTEATTSTPTSITTPRHISTPPSPTTAARVTMLKARFADTILKAQRQLCINDVPCAVKPDVIEKLVVKPSTIEKLRRAAREALEEVERTVEVEDSHKSLKDLERLCGFP
IPSCDGFLDTMHFYGLYLKNDNSEPCAMELNTIETQVVKPATIEEIRHAAREALEEIERTVEVEDSHKSFKDLERLCGFSIPSCDGFLDTMHLYGLYLKN