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MS025845 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025845
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncysteine-rich and transmembrane domain-containing protein WIH2
Genome locationscaffold173:841250..841724
RNA-Seq ExpressionMS025845
SyntenyMS025845
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022631.1 hypothetical protein SDJN02_16365 [Cucurbita argyrosperma subsp. argyrosperma]7.0e-2063.11Show/hide
Query:  MSYSYAYHHHHQPESYPPPPPGSAPPYPPSPPQPQSGYPGPPPGYPG--PPPHQGYQGYFYDGYPAPPGPHPPPPPGPPPPPY-YDHYHYNDRDECSSFL
        MSY Y+ HHH  PE+YPPP                 GYP P PGYPG  PPPHQGYQ YFYDGY  P  P PPPPPGPPPPPY + HYHY+DRDECSSFL
Subjt:  MSYSYAYHHHHQPESYPPPPPGSAPPYPPSPPQPQSGYPGPPPGYPG--PPPHQGYQGYFYDGYPAPPGPHPPPPPGPPPPPY-YDHYHYNDRDECSSFL

Query:  HGW
         GW
Subjt:  HGW

XP_022156524.1 cysteine-rich and transmembrane domain-containing protein WIH2 [Momordica charantia]4.5e-4392.93Show/hide
Query:  MSYSYAYHHHHQPESYPPPPPGSAPPYPPSPPQPQSGYPGPPPGYPGPPPHQGYQGYFYDGYPAPPGPHPPPPPGPPPPPYYDHYHYNDRDECSSFLHG
        MSYSYAYHHHHQPESYPPPPPGSAPPYPPSPPQPQS       GYPGPPPHQGYQGYFYDGYPAPPGPHPPPPPGPPPPPYYDHYHYNDRDECSSFLHG
Subjt:  MSYSYAYHHHHQPESYPPPPPGSAPPYPPSPPQPQSGYPGPPPGYPGPPPHQGYQGYFYDGYPAPPGPHPPPPPGPPPPPYYDHYHYNDRDECSSFLHG

XP_022928579.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata]1.0e-1862.75Show/hide
Query:  MSYSYAYHHHHQPESYPPPPPGSAPPYPPSPPQPQSGYPGPPPGYPG--PPPHQGYQGYFYDGYPAPPGPHPPPPPGPPPPPY-YDHYHYNDRDECSSFL
        MSY Y+ HHH  PE+YPPP                 GYP P PGYPG  PPPHQGYQ YFYDGY  P  P PPPPPGPPPPPY + HYHY+DRDECSSFL
Subjt:  MSYSYAYHHHHQPESYPPPPPGSAPPYPPSPPQPQSGYPGPPPGYPG--PPPHQGYQGYFYDGYPAPPGPHPPPPPGPPPPPY-YDHYHYNDRDECSSFL

Query:  HG
         G
Subjt:  HG

XP_022934109.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata]5.5e-1758.1Show/hide
Query:  MSYSYAYHHHHQPESYPPPPPGSAPPYPPSPPQPQSGYPGPPPGYPG-----PPPHQGYQGYFYDGYPAPPGPHPPPPPGPPPPPY-YDHYHYNDRDECS
        M+Y Y Y  H  PE+YPPP                 GY  P PGYPG     PPPHQGYQGYFYDGY +P  P PPPPPGPPPPPY + HYHY+DR++CS
Subjt:  MSYSYAYHHHHQPESYPPPPPGSAPPYPPSPPQPQSGYPGPPPGYPG-----PPPHQGYQGYFYDGYPAPPGPHPPPPPGPPPPPY-YDHYHYNDRDECS

Query:  SFLHG
        SFLHG
Subjt:  SFLHG

XP_022989747.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita maxima]8.5e-1861.76Show/hide
Query:  MSYSYAYHHHHQPESYPPPPPGSAPPYPPSPPQPQSGYPGPPPGYPG--PPPHQGYQGYFYDGYPAPPGPHPPPPPGPPPPPY-YDHYHYNDRDECSSFL
        MSY Y+ HHH  PE+YPPP                 GYP P PGYPG  PPPHQGYQ YFYDGY  P  P PPPPPGPPPPPY + HY+Y+DRDECSSFL
Subjt:  MSYSYAYHHHHQPESYPPPPPGSAPPYPPSPPQPQSGYPGPPPGYPG--PPPHQGYQGYFYDGYPAPPGPHPPPPPGPPPPPY-YDHYHYNDRDECSSFL

Query:  HG
         G
Subjt:  HG

TrEMBL top hitse value%identityAlignment
A0A6J1DTR1 cysteine-rich and transmembrane domain-containing protein WIH22.2e-4392.93Show/hide
Query:  MSYSYAYHHHHQPESYPPPPPGSAPPYPPSPPQPQSGYPGPPPGYPGPPPHQGYQGYFYDGYPAPPGPHPPPPPGPPPPPYYDHYHYNDRDECSSFLHG
        MSYSYAYHHHHQPESYPPPPPGSAPPYPPSPPQPQS       GYPGPPPHQGYQGYFYDGYPAPPGPHPPPPPGPPPPPYYDHYHYNDRDECSSFLHG
Subjt:  MSYSYAYHHHHQPESYPPPPPGSAPPYPPSPPQPQSGYPGPPPGYPGPPPHQGYQGYFYDGYPAPPGPHPPPPPGPPPPPYYDHYHYNDRDECSSFLHG

A0A6J1EL88 cysteine-rich and transmembrane domain-containing protein WIH2-like4.9e-1962.75Show/hide
Query:  MSYSYAYHHHHQPESYPPPPPGSAPPYPPSPPQPQSGYPGPPPGYPG--PPPHQGYQGYFYDGYPAPPGPHPPPPPGPPPPPY-YDHYHYNDRDECSSFL
        MSY Y+ HHH  PE+YPPP                 GYP P PGYPG  PPPHQGYQ YFYDGY  P  P PPPPPGPPPPPY + HYHY+DRDECSSFL
Subjt:  MSYSYAYHHHHQPESYPPPPPGSAPPYPPSPPQPQSGYPGPPPGYPG--PPPHQGYQGYFYDGYPAPPGPHPPPPPGPPPPPY-YDHYHYNDRDECSSFL

Query:  HG
         G
Subjt:  HG

A0A6J1F1N0 cysteine-rich and transmembrane domain-containing protein WIH2-like2.7e-1758.1Show/hide
Query:  MSYSYAYHHHHQPESYPPPPPGSAPPYPPSPPQPQSGYPGPPPGYPG-----PPPHQGYQGYFYDGYPAPPGPHPPPPPGPPPPPY-YDHYHYNDRDECS
        M+Y Y Y  H  PE+YPPP                 GY  P PGYPG     PPPHQGYQGYFYDGY +P  P PPPPPGPPPPPY + HYHY+DR++CS
Subjt:  MSYSYAYHHHHQPESYPPPPPGSAPPYPPSPPQPQSGYPGPPPGYPG-----PPPHQGYQGYFYDGYPAPPGPHPPPPPGPPPPPY-YDHYHYNDRDECS

Query:  SFLHG
        SFLHG
Subjt:  SFLHG

A0A6J1J313 cysteine-rich and transmembrane domain-containing protein WIH2-like2.7e-1758.1Show/hide
Query:  MSYSYAYHHHHQPESYPPPPPGSAPPYPPSPPQPQSGYPGPPPGYPG-----PPPHQGYQGYFYDGYPAPPGPHPPPPPGPPPPPY-YDHYHYNDRDECS
        M+Y Y Y  H  PE+YPPP                 GY  P PGYPG     PPPHQGYQGYFYDGY +P  P PPPPPGPPPPPY + HYHY+DR++CS
Subjt:  MSYSYAYHHHHQPESYPPPPPGSAPPYPPSPPQPQSGYPGPPPGYPG-----PPPHQGYQGYFYDGYPAPPGPHPPPPPGPPPPPY-YDHYHYNDRDECS

Query:  SFLHG
        SFLHG
Subjt:  SFLHG

A0A6J1JGP0 cysteine-rich and transmembrane domain-containing protein WIH2-like4.1e-1861.76Show/hide
Query:  MSYSYAYHHHHQPESYPPPPPGSAPPYPPSPPQPQSGYPGPPPGYPG--PPPHQGYQGYFYDGYPAPPGPHPPPPPGPPPPPY-YDHYHYNDRDECSSFL
        MSY Y+ HHH  PE+YPPP                 GYP P PGYPG  PPPHQGYQ YFYDGY  P  P PPPPPGPPPPPY + HY+Y+DRDECSSFL
Subjt:  MSYSYAYHHHHQPESYPPPPPGSAPPYPPSPPQPQSGYPGPPPGYPG--PPPHQGYQGYFYDGYPAPPGPHPPPPPGPPPPPY-YDHYHYNDRDECSSFL

Query:  HG
         G
Subjt:  HG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTACTCTTACGCCTACCACCACCACCACCAGCCGGAATCCTATCCTCCGCCTCCTCCCGGCTCTGCTCCGCCGTATCCTCCGTCGCCGCCGCAGCCGCAGTCTGG
GTACCCAGGCCCTCCGCCTGGGTATCCCGGCCCCCCACCGCACCAAGGCTACCAAGGCTATTTCTACGATGGATATCCGGCCCCGCCGGGCCCTCATCCTCCTCCTCCGC
CGGGCCCTCCTCCTCCGCCTTATTATGATCACTATCACTACAATGATCGAGATGAATGCTCCTCCTTCCTTCATGGATGGTACGTTTTTCCATTTCTTCAATTCGATTCA
ATTCCTATTGTGATTGATGATCATTTGTTCCGACGCCTTCGATTTCTATGCTTGTCCGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTACTCTTACGCCTACCACCACCACCACCAGCCGGAATCCTATCCTCCGCCTCCTCCCGGCTCTGCTCCGCCGTATCCTCCGTCGCCGCCGCAGCCGCAGTCTGG
GTACCCAGGCCCTCCGCCTGGGTATCCCGGCCCCCCACCGCACCAAGGCTACCAAGGCTATTTCTACGATGGATATCCGGCCCCGCCGGGCCCTCATCCTCCTCCTCCGC
CGGGCCCTCCTCCTCCGCCTTATTATGATCACTATCACTACAATGATCGAGATGAATGCTCCTCCTTCCTTCATGGATGGTACGTTTTTCCATTTCTTCAATTCGATTCA
ATTCCTATTGTGATTGATGATCATTTGTTCCGACGCCTTCGATTTCTATGCTTGTCCGTGTGA
Protein sequenceShow/hide protein sequence
MSYSYAYHHHHQPESYPPPPPGSAPPYPPSPPQPQSGYPGPPPGYPGPPPHQGYQGYFYDGYPAPPGPHPPPPPGPPPPPYYDHYHYNDRDECSSFLHGWYVFPFLQFDS
IPIVIDDHLFRRLRFLCLSV