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MS025855 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025855
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNAC domain containing protein 47
Genome locationscaffold943_1:311605..311865
RNA-Seq ExpressionMS025855
SyntenyMS025855
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003441 - NAC domain
IPR036093 - NAC domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G69490.1 NAC-like, activated by AP3/PI1.3e-0451.61Show/hide
Query:  SQTRLPPGYRFKPSDELILTHFLRNKVSEKP
        SQ+ LPPG+RF P+DE ++ ++LRN+   KP
Subjt:  SQTRLPPGYRFKPSDELILTHFLRNKVSEKP

AT3G04060.1 NAC domain containing protein 468.4e-0457.14Show/hide
Query:  QSQTRLPPGYRFKPSDELILTHFLRNKV
        Q    LPPG+RF P+DE I+TH+L+ KV
Subjt:  QSQTRLPPGYRFKPSDELILTHFLRNKV

AT3G04070.1 NAC domain containing protein 471.7e-0453.33Show/hide
Query:  QTRLPPGYRFKPSDELILTHFLRNKVSEKP
        ++ LPPG+RF P+DE ++ H+LR KVS  P
Subjt:  QTRLPPGYRFKPSDELILTHFLRNKVSEKP

AT3G04070.2 NAC domain containing protein 471.7e-0453.33Show/hide
Query:  QTRLPPGYRFKPSDELILTHFLRNKVSEKP
        ++ LPPG+RF P+DE ++ H+LR KVS  P
Subjt:  QTRLPPGYRFKPSDELILTHFLRNKVSEKP

AT5G61430.1 NAC domain containing protein 1001.7e-0441.51Show/hide
Query:  QSQTRLPPGYRFKPSDELILTHFLRNKVSEKP-NASAGGFIRDIKFSQLFETP
        + Q  LPPG+RF P+DE ++TH+L  KV +   +A A G + D+  S+ +E P
Subjt:  QSQTRLPPGYRFKPSDELILTHFLRNKVSEKP-NASAGGFIRDIKFSQLFETP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCGATCGGATCAGAAGGCATGGGGGCGGCGGCTGCGGGGGCGGCGGCTGCGGCGGCGGTGGAGGCGGCGGCCCAATCTCAGACAAGATTACCGCCAGGGTACCG
ATTTAAGCCGAGCGACGAACTTATCCTTACGCACTTTCTGAGGAACAAAGTTTCGGAGAAACCAAACGCATCAGCCGGAGGATTTATTCGCGATATAAAGTTTTCTCAGT
TATTCGAAACGCCTTCCAATCGCTTCGGTATCATATATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCGATCGGATCAGAAGGCATGGGGGCGGCGGCTGCGGGGGCGGCGGCTGCGGCGGCGGTGGAGGCGGCGGCCCAATCTCAGACAAGATTACCGCCAGGGTACCG
ATTTAAGCCGAGCGACGAACTTATCCTTACGCACTTTCTGAGGAACAAAGTTTCGGAGAAACCAAACGCATCAGCCGGAGGATTTATTCGCGATATAAAGTTTTCTCAGT
TATTCGAAACGCCTTCCAATCGCTTCGGTATCATATATTAA
Protein sequenceShow/hide protein sequence
MDSIGSEGMGAAAAGAAAAAAVEAAAQSQTRLPPGYRFKPSDELILTHFLRNKVSEKPNASAGGFIRDIKFSQLFETPSNRFGIIY