; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS025890 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025890
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGlycine-rich RNA-binding family protein
Genome locationscaffold779:603133..606773
RNA-Seq ExpressionMS025890
SyntenyMS025890
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR001878 - Zinc finger, CCHC-type
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602289.1 Glycine-rich RNA-binding protein RZ1C, partial [Cucurbita argyrosperma subsp. sororia]1.6e-14993.43Show/hide
Query:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGG
        MA KDEYRIFVGGLSWN+SER+LENAFSRYGKI+ETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHG E GER ISVNKAEPKMEGDD EPGFRGGG
Subjt:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGG

Query:  YSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRY----DGGRYGDRDRFDRRDDKYGS
        YSSGGR SFGRGGDRSVGQDECFKCGRPGHWARDCPS GGGRGRGRGSFSSRSRFD DSRGDRFGGDRDRYVDDRY    DGGRYGDRDRFDRRDDKYGS
Subjt:  YSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRY----DGGRYGDRDRFDRRDDKYGS

Query:  RDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGS-GGPGRYEGRSYRDRAGPYDRPSRGGRPSSYERY
        RDRYFDDRYPS GDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYG+ GGPGRYEGRSYRDR GPYDRPSRGGRPSSYERY
Subjt:  RDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGS-GGPGRYEGRSYRDRAGPYDRPSRGGRPSSYERY

XP_022133790.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Momordica charantia]4.8e-15999.3Show/hide
Query:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGG
        MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGG
Subjt:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGG

Query:  YSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRYDGGRYGDRDRFDRRDDKYGSRDRY
        YSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRYDGGRYGDRD FDRRDDKYGSRDRY
Subjt:  YSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRYDGGRYGDRDRFDRRDDKYGSRDRY

Query:  FDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRAGPYDRPSRGGRPSSYERY
        FDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGY+RDIGPRSGSDRYGSGGPGRYEGRSYRDRAGPYDRPSRGGRPSSYERY
Subjt:  FDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRAGPYDRPSRGGRPSSYERY

XP_022961758.1 glycine-rich RNA-binding protein RZ1C-like [Cucurbita moschata]4.5e-14993.08Show/hide
Query:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGG
        MA KDEYRIFVGGLSWN+SER+LENAFSRYGKI+ETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHG E GER ISVNKAEPKMEGDD EPGFRGGG
Subjt:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGG

Query:  YSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRY----DGGRYGDRDRFDRRDDKYGS
        YSSGGR SFGRGGDRSVGQDECFKCGRPGHWARDCPS GGGRGRGRGSFSSRSRFD DSRGDRFGGDRDRYVDDRY    DGGRYGDRDRFDRRDDKYGS
Subjt:  YSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRY----DGGRYGDRDRFDRRDDKYGS

Query:  RDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGS-GGPGRYEGRSYRDRAGPYDRPSRGGRPSSYERY
        RDRYFDDRYPS GDRF GGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYG+ GGPGRYEGRSYRDR GPYDRPSRGGRPSSYERY
Subjt:  RDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGS-GGPGRYEGRSYRDRAGPYDRPSRGGRPSSYERY

XP_022990423.1 glycine-rich RNA-binding protein RZ1C [Cucurbita maxima]3.5e-14993.08Show/hide
Query:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGG
        MA KDEYRIFVGGLSWN+SER+LENAFSRYGKI+ETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHG E GER ISVNKAEPKMEGDD EPGFRGGG
Subjt:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGG

Query:  YSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRY----DGGRYGDRDRFDRRDDKYGS
        YSSGGR SFGRGGDRSVGQDECFKCGRPGHWARDCPS GGGRGRGRGSFSSRSRFD DSRGDRFGGDRDRYVDDRY    DGGRYGDRDRFDRRDDKYGS
Subjt:  YSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRY----DGGRYGDRDRFDRRDDKYGS

Query:  RDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGS-GGPGRYEGRSYRDRAGPYDRPSRGGRPSSYERY
        RDRYFDDRYPS GDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYG+ GGPGRYEGR+YRDR GPYDRPSRGGRPSSYERY
Subjt:  RDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGS-GGPGRYEGRSYRDRAGPYDRPSRGGRPSSYERY

XP_023544240.1 glycine-rich RNA-binding protein RZ1C [Cucurbita pepo subsp. pepo]1.3e-14892.73Show/hide
Query:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGG
        MA KDEYRIFVGGLSWN+SER+LENAFSRYGKI+ETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHG E GER ISVNKAEPKMEGDD EPGFRGGG
Subjt:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGG

Query:  YSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRY----DGGRYGDRDRFDRRDDKYGS
        YSSGGR SFGRGGDRSVGQDECFKCGRPGHWARDCPS GGGRGRGRGSFSSRSRFD DSRGDRFGGDRDRYVDDRY    DGGRYGDRDRFDRRDDKYGS
Subjt:  YSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRY----DGGRYGDRDRFDRRDDKYGS

Query:  RDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGS-GGPGRYEGRSYRDRAGPYDRPSRGGRPSSYERY
        RDRYF+DRYPS GDRFAGGDRYDVSDRYPQNGYVK+RGGYDRDIGPRSGSDRYG+ GGPGRYEGRSYRDR GPYDRPSRGGRPSSYERY
Subjt:  RDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGS-GGPGRYEGRSYRDRAGPYDRPSRGGRPSSYERY

TrEMBL top hitse value%identityAlignment
A0A0A0LQB5 Uncharacterized protein6.2e-14491.9Show/hide
Query:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGG
        MA KDEYRIFVGGLSWNISERQLENAF R+GK+LETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHG+ELGER ISVNKAEPKMEGDD E GFRGGG
Subjt:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGG

Query:  YSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRYDGGRYGDRDRFDRRDDKYGSRDRY
        YSSGGR SFGRG DRSVGQDECFKCGRPGHWARDCPSVGGGRG GRGSFSSRSRFDSD RGDRFGGDRDRYVD+RY+GGRYGDRDRFDRRDDKYGSRDRY
Subjt:  YSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRYDGGRYGDRDRFDRRDDKYGSRDRY

Query:  FDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRAGPYDRPSRGGRPSSYERY
        FDDRYPS GDRF G DRYDVSDRYPQNGYVKDR  YDRDIGPRSGSDRYGSGGPGR+EGRSYRDR GPYDRPSR GRPSSY+RY
Subjt:  FDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRAGPYDRPSRGGRPSSYERY

A0A6J1BW59 glycine-rich RNA-binding protein RZ1C-like isoform X23.6e-13699.19Show/hide
Query:  MLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGGYSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSV
        MLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGGYSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSV
Subjt:  MLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGGYSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSV

Query:  GGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRYDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDR
        GGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRYDGGRYGDRD FDRRDDKYGSRDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGY+R
Subjt:  GGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRYDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDR

Query:  DIGPRSGSDRYGSGGPGRYEGRSYRDRAGPYDRPSRGGRPSSYERY
        DIGPRSGSDRYGSGGPGRYEGRSYRDRAGPYDRPSRGGRPSSYERY
Subjt:  DIGPRSGSDRYGSGGPGRYEGRSYRDRAGPYDRPSRGGRPSSYERY

A0A6J1BW89 glycine-rich RNA-binding protein RZ1C-like isoform X12.3e-15999.3Show/hide
Query:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGG
        MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGG
Subjt:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGG

Query:  YSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRYDGGRYGDRDRFDRRDDKYGSRDRY
        YSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRYDGGRYGDRD FDRRDDKYGSRDRY
Subjt:  YSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRYDGGRYGDRDRFDRRDDKYGSRDRY

Query:  FDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRAGPYDRPSRGGRPSSYERY
        FDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGY+RDIGPRSGSDRYGSGGPGRYEGRSYRDRAGPYDRPSRGGRPSSYERY
Subjt:  FDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRAGPYDRPSRGGRPSSYERY

A0A6J1HB93 glycine-rich RNA-binding protein RZ1C-like2.2e-14993.08Show/hide
Query:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGG
        MA KDEYRIFVGGLSWN+SER+LENAFSRYGKI+ETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHG E GER ISVNKAEPKMEGDD EPGFRGGG
Subjt:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGG

Query:  YSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRY----DGGRYGDRDRFDRRDDKYGS
        YSSGGR SFGRGGDRSVGQDECFKCGRPGHWARDCPS GGGRGRGRGSFSSRSRFD DSRGDRFGGDRDRYVDDRY    DGGRYGDRDRFDRRDDKYGS
Subjt:  YSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRY----DGGRYGDRDRFDRRDDKYGS

Query:  RDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGS-GGPGRYEGRSYRDRAGPYDRPSRGGRPSSYERY
        RDRYFDDRYPS GDRF GGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYG+ GGPGRYEGRSYRDR GPYDRPSRGGRPSSYERY
Subjt:  RDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGS-GGPGRYEGRSYRDRAGPYDRPSRGGRPSSYERY

A0A6J1JS04 glycine-rich RNA-binding protein RZ1C1.7e-14993.08Show/hide
Query:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGG
        MA KDEYRIFVGGLSWN+SER+LENAFSRYGKI+ETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHG E GER ISVNKAEPKMEGDD EPGFRGGG
Subjt:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGG

Query:  YSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRY----DGGRYGDRDRFDRRDDKYGS
        YSSGGR SFGRGGDRSVGQDECFKCGRPGHWARDCPS GGGRGRGRGSFSSRSRFD DSRGDRFGGDRDRYVDDRY    DGGRYGDRDRFDRRDDKYGS
Subjt:  YSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRY----DGGRYGDRDRFDRRDDKYGS

Query:  RDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGS-GGPGRYEGRSYRDRAGPYDRPSRGGRPSSYERY
        RDRYFDDRYPS GDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYG+ GGPGRYEGR+YRDR GPYDRPSRGGRPSSYERY
Subjt:  RDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGS-GGPGRYEGRSYRDRAGPYDRPSRGGRPSSYERY

SwissProt top hitse value%identityAlignment
O22703 Glycine-rich RNA-binding protein RZ1B3.2e-7357.24Show/hide
Query:  GKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGGYS
        G  E RIFVGGLSW+++ERQLE+ F RYGKI E QIM+ RDTGRPRGFGFITF DRRG DDAI+ MHGRELG + ISVNKAEPK+ G+D +   +GGGYS
Subjt:  GKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGGYS

Query:  SGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRF-DSDSRGDRFGG-----------DRDRYVDDR--YDGGRYGDRDRFD
        S G+ +          +DECFKC RPGHWARDCPS G  R R R   + RSR  D D   DR+G            + DRY+D R   DGGRY  RDRFD
Subjt:  SGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRF-DSDSRGDRFGG-----------DRDRYVDDR--YDGGRYGDRDRFD

Query:  RRDDKYGSRDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRAGPYDRPSR-GGRPSSYERY
           DKY  RD Y  +RY   GDRF   DRY + + + +N Y      YDRD   R  SDRYG  GP R EGR YR R GPYDRPSR GGRPSSYER+
Subjt:  RRDDKYGSRDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRAGPYDRPSR-GGRPSSYERY

P49310 Glycine-rich RNA-binding protein GRP1A6.8e-2342.08Show/hide
Query:  MAGKD-EYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGG
        MA  D EYR FVGGL+W   +R LE AFS+YG++L+++I+ +R+TGR RGFGF+TF D + M DAI  M+G++L  R+I+VN+A+ +  G  G     GG
Subjt:  MAGKD-EYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGG

Query:  GYSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRYDGGRYG
        GY SGG   +G GG            G  G   R+     GG   G G +SSR        G  +GG   R   D  +GG YG
Subjt:  GYSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRYDGGRYG

Q03250 Glycine-rich RNA-binding protein 72.0e-2240.66Show/hide
Query:  AGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPK-MEGDDGEPGFRGGG
        +G  EYR FVGGL+W   +R LE AF++YG +++++I+ +R+TGR RGFGF+TF D + M DAI  M+G++L  R+I+VN+A+ +   G  G  G  GGG
Subjt:  AGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPK-MEGDDGEPGFRGGG

Query:  YSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRYDGGRYG
        Y SGG   +  GG    G          G   R+    GGG   G G +SSR        G  +GG R      R  GG YG
Subjt:  YSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRYDGGRYG

Q8RWN5 Glycine-rich RNA-binding protein RZ1C2.1e-8061.39Show/hide
Query:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEP-GFRGG
        MA K+  RIFVGGLS  +++R LE AFSR+G IL+ QIMLERDTGR RGFGFITFADRR MD++IREMHGR+ G+R ISVN+AEPK+  DDGE  G RGG
Subjt:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEP-GFRGG

Query:  ---GYSSGGRPSFGRGGDRS--VGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRF--DSDSRGDRFGG-----DRDRYVDDRYDG-GRYGDRDR
           GYS  G+ SFG GG     VG+DECFKCGR GHWARDCPS GGGRG   G FSSR+     SD R DR+       DR+RY+DDRYDG  RYG RDR
Subjt:  ---GYSSGGRPSFGRGGDRS--VGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRF--DSDSRGDRFGG-----DRDRYVDDRYDG-GRYGDRDR

Query:  FDRRDDKYGSRDRYFDDRYPSGGDRFAGGDRYD-VSDRYPQNGYVKDRGGYDRDIGPRSGSDRYG---SGGP---GRYEGRSYRDRAG-PYDRPSRGGRP
        FD R + Y  RDRY  DRY +  DRFAGGDRY   SDRYP   Y K R  ++RDI P +GSDRYG   +GGP   G  EGR +R RAG PY+RPSR G  
Subjt:  FDRRDDKYGSRDRYFDDRYPSGGDRFAGGDRYD-VSDRYPQNGYVKDRGGYDRDIGPRSGSDRYG---SGGP---GRYEGRSYRDRAG-PYDRPSRGGRP

Query:  SSY
         +Y
Subjt:  SSY

Q9LIN3 Glycine-rich RNA-binding protein RZ1A1.3e-3740.78Show/hide
Query:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEG----DDGEPGF
        M+   EYR F+GGL+W  S+R L +AF +YG ++E +++L++ +GR RGFGFITF +++ MD+AI  M+G +L  RTI+V+KA+P   G    +DG+ G 
Subjt:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEG----DDGEPGF

Query:  RGGGYSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRY--VDDRYDGGRYGDRDRFDRRDDKY
          G      RPS GRGG       +CFKCG+PGH+AR+CPS     G GR S          S+ DR+    DRY   DDRY        DR+  +DD+Y
Subjt:  RGGGYSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRY--VDDRYDGGRYGDRDRFDRRDDKY

Query:  GSRDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRAGPYDRPSRGG
         S+    DDRY S  DR+  G R     RY  +   +  GG  RD G R        G PG       R    PYDRP  GG
Subjt:  GSRDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRAGPYDRPSRGG

Arabidopsis top hitse value%identityAlignment
AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain2.3e-7457.24Show/hide
Query:  GKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGGYS
        G  E RIFVGGLSW+++ERQLE+ F RYGKI E QIM+ RDTGRPRGFGFITF DRRG DDAI+ MHGRELG + ISVNKAEPK+ G+D +   +GGGYS
Subjt:  GKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGGYS

Query:  SGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRF-DSDSRGDRFGG-----------DRDRYVDDR--YDGGRYGDRDRFD
        S G+ +          +DECFKC RPGHWARDCPS G  R R R   + RSR  D D   DR+G            + DRY+D R   DGGRY  RDRFD
Subjt:  SGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRF-DSDSRGDRFGG-----------DRDRYVDDR--YDGGRYGDRDRFD

Query:  RRDDKYGSRDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRAGPYDRPSR-GGRPSSYERY
           DKY  RD Y  +RY   GDRF   DRY + + + +N Y      YDRD   R  SDRYG  GP R EGR YR R GPYDRPSR GGRPSSYER+
Subjt:  RRDDKYGSRDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRAGPYDRPSR-GGRPSSYERY

AT1G60650.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain2.3e-7457.24Show/hide
Query:  GKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGGYS
        G  E RIFVGGLSW+++ERQLE+ F RYGKI E QIM+ RDTGRPRGFGFITF DRRG DDAI+ MHGRELG + ISVNKAEPK+ G+D +   +GGGYS
Subjt:  GKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGGYS

Query:  SGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRF-DSDSRGDRFGG-----------DRDRYVDDR--YDGGRYGDRDRFD
        S G+ +          +DECFKC RPGHWARDCPS G  R R R   + RSR  D D   DR+G            + DRY+D R   DGGRY  RDRFD
Subjt:  SGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRF-DSDSRGDRFGG-----------DRDRYVDDR--YDGGRYGDRDRFD

Query:  RRDDKYGSRDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRAGPYDRPSR-GGRPSSYERY
           DKY  RD Y  +RY   GDRF   DRY + + + +N Y      YDRD   R  SDRYG  GP R EGR YR R GPYDRPSR GGRPSSYER+
Subjt:  RRDDKYGSRDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRAGPYDRPSR-GGRPSSYERY

AT2G21660.2 cold, circadian rhythm, and rna binding 22.2e-2443.54Show/hide
Query:  AGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGG-
        +G  EYR FVGGL+W   +R LE AF++YG +++++I+ +R+TGR RGFGF+TF D + M DAI  M+G++L  R+I+VN+A+ +  G  G  G RGGG 
Subjt:  AGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGG-

Query:  YSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRG
        Y  GG    G GG    G     + G  G +       GGG G G G
Subjt:  YSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRG

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain9.1e-3940.78Show/hide
Query:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEG----DDGEPGF
        M+   EYR F+GGL+W  S+R L +AF +YG ++E +++L++ +GR RGFGFITF +++ MD+AI  M+G +L  RTI+V+KA+P   G    +DG+ G 
Subjt:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEG----DDGEPGF

Query:  RGGGYSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRY--VDDRYDGGRYGDRDRFDRRDDKY
          G      RPS GRGG       +CFKCG+PGH+AR+CPS     G GR S          S+ DR+    DRY   DDRY        DR+  +DD+Y
Subjt:  RGGGYSSGGRPSFGRGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRY--VDDRYDGGRYGDRDRFDRRDDKY

Query:  GSRDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRAGPYDRPSRGG
         S+    DDRY S  DR+  G R     RY  +   +  GG  RD G R        G PG       R    PYDRP  GG
Subjt:  GSRDRYFDDRYPSGGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRAGPYDRPSRGG

AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain1.5e-8161.39Show/hide
Query:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEP-GFRGG
        MA K+  RIFVGGLS  +++R LE AFSR+G IL+ QIMLERDTGR RGFGFITFADRR MD++IREMHGR+ G+R ISVN+AEPK+  DDGE  G RGG
Subjt:  MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEP-GFRGG

Query:  ---GYSSGGRPSFGRGGDRS--VGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRF--DSDSRGDRFGG-----DRDRYVDDRYDG-GRYGDRDR
           GYS  G+ SFG GG     VG+DECFKCGR GHWARDCPS GGGRG   G FSSR+     SD R DR+       DR+RY+DDRYDG  RYG RDR
Subjt:  ---GYSSGGRPSFGRGGDRS--VGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRF--DSDSRGDRFGG-----DRDRYVDDRYDG-GRYGDRDR

Query:  FDRRDDKYGSRDRYFDDRYPSGGDRFAGGDRYD-VSDRYPQNGYVKDRGGYDRDIGPRSGSDRYG---SGGP---GRYEGRSYRDRAG-PYDRPSRGGRP
        FD R + Y  RDRY  DRY +  DRFAGGDRY   SDRYP   Y K R  ++RDI P +GSDRYG   +GGP   G  EGR +R RAG PY+RPSR G  
Subjt:  FDRRDDKYGSRDRYFDDRYPSGGDRFAGGDRYD-VSDRYPQNGYVKDRGGYDRDIGPRSGSDRYG---SGGP---GRYEGRSYRDRAG-PYDRPSRGGRP

Query:  SSY
         +Y
Subjt:  SSY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGGAAGGACGAGTACCGAATATTTGTTGGAGGATTGTCATGGAACATCTCGGAGCGTCAGCTCGAGAACGCTTTCAGCCGCTACGGCAAAATCCTGGAAACTCA
GATCATGTTAGAACGAGATACAGGCCGTCCTCGTGGATTCGGTTTTATTACCTTTGCAGATCGTCGAGGGATGGATGATGCAATCAGGGAGATGCATGGGCGTGAGCTTG
GTGAGAGGACTATCTCAGTAAATAAGGCTGAACCGAAGATGGAGGGAGATGATGGAGAACCAGGCTTTAGGGGAGGAGGCTATTCATCTGGTGGTAGGCCCAGTTTTGGG
AGAGGAGGAGATAGATCTGTGGGGCAAGATGAATGCTTCAAGTGTGGACGCCCAGGACATTGGGCACGAGATTGCCCATCAGTTGGTGGTGGACGAGGTAGGGGTAGAGG
TTCATTTTCATCCCGTTCTCGATTTGATAGTGATAGTCGTGGAGATCGTTTTGGAGGAGATCGGGACCGATATGTGGATGACCGCTATGATGGAGGGCGATATGGAGATA
GAGATCGTTTTGACCGTAGAGATGACAAGTATGGAAGTCGAGACCGCTATTTTGATGACAGGTACCCGTCTGGTGGAGATCGCTTTGCTGGTGGTGATAGGTATGATGTT
AGCGATCGTTATCCTCAAAACGGCTATGTTAAAGACAGAGGCGGGTACGATAGGGACATTGGTCCTAGGAGTGGCAGTGATAGGTATGGAAGCGGAGGTCCAGGCCGTTA
CGAGGGAAGAAGTTATAGAGATAGGGCAGGTCCTTACGACCGCCCAAGCAGGGGAGGACGGCCGTCTTCCTACGAGCGCTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGGAAGGACGAGTACCGAATATTTGTTGGAGGATTGTCATGGAACATCTCGGAGCGTCAGCTCGAGAACGCTTTCAGCCGCTACGGCAAAATCCTGGAAACTCA
GATCATGTTAGAACGAGATACAGGCCGTCCTCGTGGATTCGGTTTTATTACCTTTGCAGATCGTCGAGGGATGGATGATGCAATCAGGGAGATGCATGGGCGTGAGCTTG
GTGAGAGGACTATCTCAGTAAATAAGGCTGAACCGAAGATGGAGGGAGATGATGGAGAACCAGGCTTTAGGGGAGGAGGCTATTCATCTGGTGGTAGGCCCAGTTTTGGG
AGAGGAGGAGATAGATCTGTGGGGCAAGATGAATGCTTCAAGTGTGGACGCCCAGGACATTGGGCACGAGATTGCCCATCAGTTGGTGGTGGACGAGGTAGGGGTAGAGG
TTCATTTTCATCCCGTTCTCGATTTGATAGTGATAGTCGTGGAGATCGTTTTGGAGGAGATCGGGACCGATATGTGGATGACCGCTATGATGGAGGGCGATATGGAGATA
GAGATCGTTTTGACCGTAGAGATGACAAGTATGGAAGTCGAGACCGCTATTTTGATGACAGGTACCCGTCTGGTGGAGATCGCTTTGCTGGTGGTGATAGGTATGATGTT
AGCGATCGTTATCCTCAAAACGGCTATGTTAAAGACAGAGGCGGGTACGATAGGGACATTGGTCCTAGGAGTGGCAGTGATAGGTATGGAAGCGGAGGTCCAGGCCGTTA
CGAGGGAAGAAGTTATAGAGATAGGGCAGGTCCTTACGACCGCCCAAGCAGGGGAGGACGGCCGTCTTCCTACGAGCGCTATTAA
Protein sequenceShow/hide protein sequence
MAGKDEYRIFVGGLSWNISERQLENAFSRYGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGRELGERTISVNKAEPKMEGDDGEPGFRGGGYSSGGRPSFG
RGGDRSVGQDECFKCGRPGHWARDCPSVGGGRGRGRGSFSSRSRFDSDSRGDRFGGDRDRYVDDRYDGGRYGDRDRFDRRDDKYGSRDRYFDDRYPSGGDRFAGGDRYDV
SDRYPQNGYVKDRGGYDRDIGPRSGSDRYGSGGPGRYEGRSYRDRAGPYDRPSRGGRPSSYERY