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MS025892 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025892
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING-type domain-containing protein
Genome locationscaffold391:348461..348670
RNA-Seq ExpressionMS025892
SyntenyMS025892
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605938.1 hypothetical protein SDJN03_03255, partial [Cucurbita argyrosperma subsp. sororia]2.3e-1477.94Show/hide
Query:  MEAGRQVARRISRPSAAEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARLGR
        +  GRQ AR + R +    A ASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLAR GR
Subjt:  MEAGRQVARRISRPSAAEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARLGR
XP_022153003.1 uncharacterized protein LOC111020607 [Momordica charantia]1.8e-1989.86Show/hide
Query:  MEAGRQVARRISRPSAAEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARLGRN
        + AGRQ AR I RPS  EFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARLGRN
Subjt:  MEAGRQVARRISRPSAAEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARLGRN
XP_022943783.1 uncharacterized protein LOC111448431 [Cucurbita moschata]8.0e-1579.71Show/hide
Query:  MEAGRQVARRISRPSAAEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARLGRN
        + AGRQ AR + RP   EF+ ASSSREPT KDASKDKTGRRAKRALKREAADKAAAAKHQEHLAR G N
Subjt:  MEAGRQVARRISRPSAAEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARLGRN
XP_022987030.1 uncharacterized protein LOC111484597 [Cucurbita maxima]8.0e-1579.71Show/hide
Query:  MEAGRQVARRISRPSAAEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARLGRN
        + AGRQ AR + RP   EF+ ASSSREPT KDASKDKTGRRAKRALKREAADKAAAAKHQEHLAR G N
Subjt:  MEAGRQVARRISRPSAAEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARLGRN
XP_023511780.1 uncharacterized protein LOC111776696 [Cucurbita pepo subsp. pepo]4.0e-1478.26Show/hide
Query:  MEAGRQVARRISRPSAAEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARLGRN
        + AGRQ AR + RP   EF+ ASSSREP  KDASKDKTGRRAKRALKREAADKAAAAKHQEHLAR G N
Subjt:  MEAGRQVARRISRPSAAEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARLGRN
TrEMBL top hitse value%identityAlignment
A0A6J1DGD3 uncharacterized protein LOC1110206078.9e-2089.86Show/hide
Query:  MEAGRQVARRISRPSAAEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARLGRN
        + AGRQ AR I RPS  EFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARLGRN
Subjt:  MEAGRQVARRISRPSAAEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARLGRN
A0A6J1FXD4 uncharacterized protein LOC1114484313.9e-1579.71Show/hide
Query:  MEAGRQVARRISRPSAAEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARLGRN
        + AGRQ AR + RP   EF+ ASSSREPT KDASKDKTGRRAKRALKREAADKAAAAKHQEHLAR G N
Subjt:  MEAGRQVARRISRPSAAEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARLGRN
A0A6J1H396 uncharacterized protein LOC1114596099.5e-1476.47Show/hide
Query:  MEAGRQVARRISRPSAAEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARLGR
        +  GRQ AR + R +    A ASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQE LAR GR
Subjt:  MEAGRQVARRISRPSAAEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARLGR
A0A6J1JFP2 uncharacterized protein LOC1114845973.9e-1579.71Show/hide
Query:  MEAGRQVARRISRPSAAEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARLGRN
        + AGRQ AR + RP   EF+ ASSSREPT KDASKDKTGRRAKRALKREAADKAAAAKHQEHLAR G N
Subjt:  MEAGRQVARRISRPSAAEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARLGRN
A0A6J1K158 uncharacterized protein LOC1114907675.6e-1476.47Show/hide
Query:  MEAGRQVARRISRPSAAEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARLGR
        +  GRQ AR + R +    A ASSSREP KKDASKDKTGRRAKRALKREAADKAAAAKHQEHLAR GR
Subjt:  MEAGRQVARRISRPSAAEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARLGR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G12310.1 RING/U-box superfamily protein1.0e-0451.95Show/hide
Query:  MEAGRQVARRISRPSAAEFA-----AASSSREPTKKDASKDKTGRRAKRALKREAADKA----AAAKHQEHLARLGR
        + AGRQ AR +   +    A     A+SSS EP +K +S   TGRRAKRA+KREAA+KA    AAAKH+  L RLGR
Subjt:  MEAGRQVARRISRPSAAEFA-----AASSSREPTKKDASKDKTGRRAKRALKREAADKA----AAAKHQEHLARLGR
AT5G19430.1 RING/U-box superfamily protein1.9e-0650.65Show/hide
Query:  MEAGRQVARRISR----PSAAEFAAASSSREPTKKDA-SKDKTGRRAKRALKREAADKA----AAAKHQEHLARLGR
        + +GRQ AR + R     S++  ++ SSS EP  K   + + TGRRAKRA+KREAA+KA    AAAKH+ HL RLGR
Subjt:  MEAGRQVARRISR----PSAAEFAAASSSREPTKKDA-SKDKTGRRAKRALKREAADKA----AAAKHQEHLARLGR
AT5G19430.2 RING/U-box superfamily protein1.9e-0650.65Show/hide
Query:  MEAGRQVARRISR----PSAAEFAAASSSREPTKKDA-SKDKTGRRAKRALKREAADKA----AAAKHQEHLARLGR
        + +GRQ AR + R     S++  ++ SSS EP  K   + + TGRRAKRA+KREAA+KA    AAAKH+ HL RLGR
Subjt:  MEAGRQVARRISR----PSAAEFAAASSSREPTKKDA-SKDKTGRRAKRALKREAADKA----AAAKHQEHLARLGR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCAGGTCGACAAGTAGCACGACGGATTTCTAGGCCAAGTGCTGCAGAGTTTGCTGCGGCTAGCTCATCACGCGAGCCTACAAAGAAAGATGCTTCTAAAGATAA
AACCGGTCGACGAGCTAAAAGAGCTTTAAAACGGGAAGCTGCCGATAAAGCAGCAGCAGCAAAGCATCAGGAACATCTAGCTAGGTTGGGTCGGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCAGGTCGACAAGTAGCACGACGGATTTCTAGGCCAAGTGCTGCAGAGTTTGCTGCGGCTAGCTCATCACGCGAGCCTACAAAGAAAGATGCTTCTAAAGATAA
AACCGGTCGACGAGCTAAAAGAGCTTTAAAACGGGAAGCTGCCGATAAAGCAGCAGCAGCAAAGCATCAGGAACATCTAGCTAGGTTGGGTCGGAATTGA
Protein sequenceShow/hide protein sequence
MEAGRQVARRISRPSAAEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARLGRN