; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS025910 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025910
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic
Genome locationscaffold391:928812..929213
RNA-Seq ExpressionMS025910
SyntenyMS025910
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV90122.1 hypothetical protein CFOL_v3_33531 [Cephalotus follicularis]1.1e-2050.79Show/hide
Query:  ADSRSPWNWKGISNNYQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGWIGLGGNLHLVFGLDLGCGVGLGLAIGQGIGYGF
        +DS S WNW G +N  +RKD N F +       R+K     +V   GGG G+GCG G+GFG+VG   IG GG++  VFG+ LGCGVG+G   GQGIGYGF
Subjt:  ADSRSPWNWKGISNNYQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGWIGLGGNLHLVFGLDLGCGVGLGLAIGQGIGYGF

Query:  SSESLHSYFSDDNSDSKHRPLIPNLK
        S +SL SYF +   DSK RPLI  ++
Subjt:  SSESLHSYFSDDNSDSKHRPLIPNLK

KAA0051071.1 fibroin heavy chain [Cucumis melo var. makuwa]9.3e-2057.6Show/hide
Query:  SRSPWNWKGISNNYQRKDQNKFSLPNIFDANRRKPNE---PILVLEAGGGAGVGCGVGLGFGLVGAGWIGLGG-----NLHLVFGLDLGCGVGLGLAIGQ
        S SPWN             N  +    FD +RR   E     LVLEAGGGAGVGCG+G GFGLVG   IG GG     +LHLVFGL  GCGVGLGL IGQ
Subjt:  SRSPWNWKGISNNYQRKDQNKFSLPNIFDANRRKPNE---PILVLEAGGGAGVGCGVGLGFGLVGAGWIGLGG-----NLHLVFGLDLGCGVGLGLAIGQ

Query:  GIGYGFSSESLHSYFSDDNSDSKHR
        G GYGFS ESL SYFS  NSD KH+
Subjt:  GIGYGFSSESLHSYFSDDNSDSKHR

KAG6578355.1 hypothetical protein SDJN03_22803, partial [Cucurbita argyrosperma subsp. sororia]3.4e-3063.85Show/hide
Query:  MNADSRSPWNWK-GISNNYQRK-DQNKFSLPNIFDANRRKPNE-PILVLEAGGGAGVGCGVGLGFGLVGAGWIGLGG-----NLHLVFGLDLGCGVGLGL
        M +DS SPW W   I+NN+  K D + FSLPNIFDANRR   + P LVL+AGGGAGVGCGVGLGFGLVG   IG GG     +LHLVFGL LGCGVGLGL
Subjt:  MNADSRSPWNWK-GISNNYQRK-DQNKFSLPNIFDANRRKPNE-PILVLEAGGGAGVGCGVGLGFGLVGAGWIGLGG-----NLHLVFGLDLGCGVGLGL

Query:  AIGQGIGYGFSSESLHSYFSDDNSDSKHRP
         IG+GIGYG S +SL SYFSD   + + +P
Subjt:  AIGQGIGYGFSSESLHSYFSDDNSDSKHRP

XP_010108896.1 keratin, type II cytoskeletal 5 [Morus notabilis]6.0e-1950.4Show/hide
Query:  DSRSPWNWKGISNNYQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGWIGLGG----NLHLVFGLDLGCGVGLGLAIGQGIG
        DS + WNW     N +R  + +F +    D +R++  E   VL  G GAG+GCGVGLGFGLVG    G GG    +L LV G+ LGCGVGLG+  GQG G
Subjt:  DSRSPWNWKGISNNYQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGWIGLGG----NLHLVFGLDLGCGVGLGLAIGQGIG

Query:  YGFSSESLHSYFSDDNSDSKHRPLI
        YG+S ESL S  SD +SDS  R LI
Subjt:  YGFSSESLHSYFSDDNSDSKHRPLI

XP_034209523.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic [Prunus dulcis]1.3e-1847.15Show/hide
Query:  MNADSRSPWNWKGISNNYQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGWIGLG----GNLHLVFGLDLGCGVGLGLAIGQ
        +NAD+ S W WK    N +++++N+FS+  IF ++++   E  ++L  G GAG+GCG G+GFGLVG   +G G      + LVFG+ LGCG+G+G   GQ
Subjt:  MNADSRSPWNWKGISNNYQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGWIGLG----GNLHLVFGLDLGCGVGLGLAIGQ

Query:  GIGYGFSSESLHSYFSDDNSDSK
        G+GYG SS+SL SY S ++SDSK
Subjt:  GIGYGFSSESLHSYFSDDNSDSK

TrEMBL top hitse value%identityAlignment
A0A1Q3DCD5 Uncharacterized protein5.3e-2150.79Show/hide
Query:  ADSRSPWNWKGISNNYQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGWIGLGGNLHLVFGLDLGCGVGLGLAIGQGIGYGF
        +DS S WNW G +N  +RKD N F +       R+K     +V   GGG G+GCG G+GFG+VG   IG GG++  VFG+ LGCGVG+G   GQGIGYGF
Subjt:  ADSRSPWNWKGISNNYQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGWIGLGGNLHLVFGLDLGCGVGLGLAIGQGIGYGF

Query:  SSESLHSYFSDDNSDSKHRPLIPNLK
        S +SL SYF +   DSK RPLI  ++
Subjt:  SSESLHSYFSDDNSDSKHRPLIPNLK

A0A2N9FV55 Uncharacterized protein6.5e-1950Show/hide
Query:  MNADSRSPWN-WKGISNNYQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGWIGLGG----NLHLVFGLDLGCGVGLGLAIG
        + ADS S WN W G ++N ++ ++ +F +      NR K  E  +VL  GGG G+GCGVG+GFGLVG   IG GG    +L LVFG+ +GCGVG+G   G
Subjt:  MNADSRSPWN-WKGISNNYQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGWIGLGG----NLHLVFGLDLGCGVGLGLAIG

Query:  QGIGYGFSSESLHSYFS-DDNSDSKHRPLI
        QGIG GFS +SL SY S   +SDSK R +I
Subjt:  QGIGYGFSSESLHSYFS-DDNSDSKHRPLI

A0A5A7UC28 Fibroin heavy chain4.5e-2057.6Show/hide
Query:  SRSPWNWKGISNNYQRKDQNKFSLPNIFDANRRKPNE---PILVLEAGGGAGVGCGVGLGFGLVGAGWIGLGG-----NLHLVFGLDLGCGVGLGLAIGQ
        S SPWN             N  +    FD +RR   E     LVLEAGGGAGVGCG+G GFGLVG   IG GG     +LHLVFGL  GCGVGLGL IGQ
Subjt:  SRSPWNWKGISNNYQRKDQNKFSLPNIFDANRRKPNE---PILVLEAGGGAGVGCGVGLGFGLVGAGWIGLGG-----NLHLVFGLDLGCGVGLGLAIGQ

Query:  GIGYGFSSESLHSYFSDDNSDSKHR
        G GYGFS ESL SYFS  NSD KH+
Subjt:  GIGYGFSSESLHSYFSDDNSDSKHR

A0A5N6QWW9 Uncharacterized protein1.4e-1847.66Show/hide
Query:  MNADSRSPWNWKGISNNYQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGWIGLGG----NLHLVFGLDLGCGVGLGLAIGQ
        + ADS S W W G  +N ++ ++ +F +   F   R    E  +VL  G G G+GCGVG+GFGLVG   IG GG    +L +VFG  +GCGVGLG   GQ
Subjt:  MNADSRSPWNWKGISNNYQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGWIGLGG----NLHLVFGLDLGCGVGLGLAIGQ

Query:  GIGYGFSSESLHSYFSDDNSDSKHRPLI
        GIGYGFS ESL SY S  +SDS  + ++
Subjt:  GIGYGFSSESLHSYFSDDNSDSKHRPLI

W9S8Y9 Uncharacterized protein2.9e-1950.4Show/hide
Query:  DSRSPWNWKGISNNYQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGWIGLGG----NLHLVFGLDLGCGVGLGLAIGQGIG
        DS + WNW     N +R  + +F +    D +R++  E   VL  G GAG+GCGVGLGFGLVG    G GG    +L LV G+ LGCGVGLG+  GQG G
Subjt:  DSRSPWNWKGISNNYQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGWIGLGG----NLHLVFGLDLGCGVGLGLAIGQGIG

Query:  YGFSSESLHSYFSDDNSDSKHRPLI
        YG+S ESL S  SD +SDS  R LI
Subjt:  YGFSSESLHSYFSDDNSDSKHRPLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G66820.1 glycine-rich protein4.0e-0540.91Show/hide
Query:  GGGAGVGCGVGLGFGLVGAGWIGLGGNL---HLVFGLDLGCGVGLGLAIGQGIGYGFSSESLHSYF
        G G G+GCG G+G GL G   IG    L   ++V G  +GCG+G G   G G+G G+S + +   F
Subjt:  GGGAGVGCGVGLGFGLVGAGWIGLGGNL---HLVFGLDLGCGVGLGLAIGQGIGYGFSSESLHSYF

AT4G10330.1 glycine-rich protein9.0e-0544.44Show/hide
Query:  GAGVGCGVGLGFGLVGAGWIGLG-GNLHLVFGLDLGCGVGLGLAIGQGIGYGFSSESLHSYFS
        G GVGCG G G GL+G   +G G G   L FGL  G G G+G+  G G+G G + +   SY++
Subjt:  GAGVGCGVGLGFGLVGAGWIGLG-GNLHLVFGLDLGCGVGLGLAIGQGIGYGFSSESLHSYFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGCCGATTCCAGATCGCCATGGAACTGGAAAGGAATTTCAAACAATTATCAGAGGAAGGACCAAAACAAATTCTCTCTCCCCAACATTTTCGACGCCAATCGCCG
GAAGCCCAATGAACCAATACTAGTCTTAGAGGCCGGCGGAGGAGCGGGGGTAGGCTGCGGCGTCGGCCTTGGTTTCGGTCTGGTCGGCGCCGGCTGGATTGGCCTCGGCG
GCAACCTTCACCTGGTCTTCGGGCTCGATCTCGGCTGCGGCGTTGGCCTAGGGCTTGCAATCGGCCAAGGGATTGGCTACGGCTTTAGCTCCGAATCTTTACATTCTTAT
TTCTCGGATGATAACTCTGATTCCAAACATAGGCCTCTCATTCCAAACCTAAAATATCTAAAAAGAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACGCCGATTCCAGATCGCCATGGAACTGGAAAGGAATTTCAAACAATTATCAGAGGAAGGACCAAAACAAATTCTCTCTCCCCAACATTTTCGACGCCAATCGCCG
GAAGCCCAATGAACCAATACTAGTCTTAGAGGCCGGCGGAGGAGCGGGGGTAGGCTGCGGCGTCGGCCTTGGTTTCGGTCTGGTCGGCGCCGGCTGGATTGGCCTCGGCG
GCAACCTTCACCTGGTCTTCGGGCTCGATCTCGGCTGCGGCGTTGGCCTAGGGCTTGCAATCGGCCAAGGGATTGGCTACGGCTTTAGCTCCGAATCTTTACATTCTTAT
TTCTCGGATGATAACTCTGATTCCAAACATAGGCCTCTCATTCCAAACCTAAAATATCTAAAAAGAATTTAA
Protein sequenceShow/hide protein sequence
MNADSRSPWNWKGISNNYQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGWIGLGGNLHLVFGLDLGCGVGLGLAIGQGIGYGFSSESLHSY
FSDDNSDSKHRPLIPNLKYLKRI