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MS025924 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS025924
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionenoyl-CoA delta isomerase 2, peroxisomal-like
Genome locationscaffold878:512585..512830
RNA-Seq ExpressionMS025924
SyntenyMS025924
Gene Ontology termsGO:0006635 - fatty acid beta-oxidation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004165 - dodecenoyl-CoA delta-isomerase activity (molecular function)
GO:0004300 - enoyl-CoA hydratase activity (molecular function)
InterPro domainsIPR001753 - Enoyl-CoA hydratase/isomerase
IPR029045 - ClpP/crotonase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582370.1 Enoyl-CoA delta isomerase 3, partial [Cucurbita argyrosperma subsp. sororia]6.0e-2271.43Show/hide
Query:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSSS
        M++IFK +VAEL SFPMPTIAA+ GHAAAAGF+LAL+HDY++MR+DRGV+YMSE+DLG + P++F AL +SKIGSSS
Subjt:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSSS

KAG7018780.1 Enoyl-CoA delta isomerase 3, partial [Cucurbita argyrosperma subsp. argyrosperma]6.0e-2271.43Show/hide
Query:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSSS
        M++IFK +VAEL SFPMPTIAA+ GHAAAAGF+LAL+HDY++MR+DRGV+YMSE+DLG + P++F AL +SKIGSSS
Subjt:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSSS

XP_004134079.1 enoyl-CoA delta isomerase 2, peroxisomal [Cucumis sativus]2.3e-2171.05Show/hide
Query:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSS
        ++ IFK +VAEL S PMPTIAA+TGHAAAAGF LAL+HDY++MR+DRGV+YM ELDLG + P++FMAL +SKIGSS
Subjt:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSS

XP_022924233.1 enoyl-CoA delta isomerase 2, peroxisomal-like [Cucurbita moschata]6.0e-2271.43Show/hide
Query:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSSS
        M++IFK +VAEL SFPMPTIAA+ GHAAAAGF+LAL+HDY++MR+DRGV+YMSE+DLG + P++F AL +SKIGSSS
Subjt:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSSS

XP_023526034.1 enoyl-CoA delta isomerase 2, peroxisomal-like [Cucurbita pepo subsp. pepo]6.0e-2271.43Show/hide
Query:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSSS
        M++IFK +VAEL SFPMPTIAA+ GHAAAAGF+LAL+HDY++MR+DRGV+YMSE+DLG + P++F AL +SKIGSSS
Subjt:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSSS

TrEMBL top hitse value%identityAlignment
A0A0A0L9X4 Uncharacterized protein1.1e-2171.05Show/hide
Query:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSS
        ++ IFK +VAEL S PMPTIAA+TGHAAAAGF LAL+HDY++MR+DRGV+YM ELDLG + P++FMAL +SKIGSS
Subjt:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSS

A0A5A7U6I8 Enoyl-CoA delta isomerase 2, peroxisomal-like1.5e-2170.13Show/hide
Query:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSSS
        M++ FK ++AEL S PMPTIAA++GHAAAAGFMLAL+HDY++MR+DRGV+YMSE+DLG S P++F AL +SKIGSSS
Subjt:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSSS

A0A5D3CZF5 Enoyl-CoA delta isomerase 2, peroxisomal-like1.5e-2171.05Show/hide
Query:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSS
        ++ IFK +VAEL S PMPTIAA+TGHAAAAGF LAL+HDY++MR+DRGV+YM ELDLG + P++FMAL +SKIGSS
Subjt:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSS

A0A6J1EBT7 enoyl-CoA delta isomerase 2, peroxisomal-like2.9e-2271.43Show/hide
Query:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSSS
        M++IFK +VAEL SFPMPTIAA+ GHAAAAGF+LAL+HDY++MR+DRGV+YMSE+DLG + P++F AL +SKIGSSS
Subjt:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSSS

A0A6J1IWE7 enoyl-CoA delta isomerase 2, peroxisomal-like1.5e-2170.13Show/hide
Query:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSSS
        M++IFK +VAEL S PMPTIAA+ GHAAAAGF+LAL+HDY++MR+DRGV+YMSE+DLG + P++F AL +SKIGSSS
Subjt:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSSS

SwissProt top hitse value%identityAlignment
O04469 Enoyl-CoA delta isomerase 1, peroxisomal6.5e-1961.64Show/hide
Query:  KRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSSSS
        + LVA+L S PMPTIAA+TGHA+AAG +LA++HDYV+MR DRG +YMSELD+    P +FMA++R KIGS ++
Subjt:  KRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSSSS

O23299 Enoyl-CoA delta isomerase 2, peroxisomal4.8e-2265.38Show/hide
Query:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSSSS
        M+  FK +VA L   PMPTIAAL GHAAAAG +LAL+HDYV MR DRGV+YMSE+D+G S P++F ALVR+KIG+S++
Subjt:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSSSS

O23300 Enoyl-CoA delta isomerase 31.3e-1961.33Show/hide
Query:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGS
        M++ FK ++A L   PMPTIAAL GHAAA+G M AL+HDYV MR DRGV+YMSE+D+G   P++F ALV +K+GS
Subjt:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGS

Arabidopsis top hitse value%identityAlignment
AT1G65520.1 delta(3), delta(2)-enoyl CoA isomerase 14.6e-2061.64Show/hide
Query:  KRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSSSS
        + LVA+L S PMPTIAA+TGHA+AAG +LA++HDYV+MR DRG +YMSELD+    P +FMA++R KIGS ++
Subjt:  KRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSSSS

AT4G14430.1 indole-3-butyric acid response 103.4e-2365.38Show/hide
Query:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSSSS
        M+  FK +VA L   PMPTIAAL GHAAAAG +LAL+HDYV MR DRGV+YMSE+D+G S P++F ALVR+KIG+S++
Subjt:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSSSS

AT4G14440.1 3-hydroxyacyl-CoA dehydratase 19.3e-2161.33Show/hide
Query:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGS
        M++ FK ++A L   PMPTIAAL GHAAA+G M AL+HDYV MR DRGV+YMSE+D+G   P++F ALV +K+GS
Subjt:  MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCGCATTTTCAAGCGCCTCGTCGCGGAACTCTTTTCCTTTCCCATGCCCACCATAGCCGCTCTGACGGGGCACGCTGCCGCCGCCGGCTTCATGCTGGCGCTGGC
CCACGACTATGTGATGATGAGGAACGACCGAGGCGTGGTGTACATGAGCGAGCTGGATCTAGGTGCGAGTCAGCCCGAGTTCTTCATGGCGTTGGTTAGGTCTAAGATTG
GGTCGAGTTCTTCACCCCAGTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCGCATTTTCAAGCGCCTCGTCGCGGAACTCTTTTCCTTTCCCATGCCCACCATAGCCGCTCTGACGGGGCACGCTGCCGCCGCCGGCTTCATGCTGGCGCTGGC
CCACGACTATGTGATGATGAGGAACGACCGAGGCGTGGTGTACATGAGCGAGCTGGATCTAGGTGCGAGTCAGCCCGAGTTCTTCATGGCGTTGGTTAGGTCTAAGATTG
GGTCGAGTTCTTCACCCCAGTCATAA
Protein sequenceShow/hide protein sequence
MLRIFKRLVAELFSFPMPTIAALTGHAAAAGFMLALAHDYVMMRNDRGVVYMSELDLGASQPEFFMALVRSKIGSSSSPQS