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MS026001 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026001
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGlycosyl hydrolase family protein with chitinaseinsertion domain
Genome locationscaffold35:3776646..3777113
RNA-Seq ExpressionMS026001
SyntenyMS026001
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACN27751.1 unknown [Zea mays]2.0e-0543.75Show/hide
Query:  SEPESAGLFEEGDEGAIDMGRHESFDAAEELAADEYGGD-------GWAGAEVVEDG-FDVGAVGEVVELDDGGADAEAEEEAFDHGAHAAAAHAEHHHR
        S+PE AG+ E+  EGA+D+  H++   A++ AADE+ G        G  GAE    G   + A   VV+L      A A EEA    AHAA AHAEHHHR
Subjt:  SEPESAGLFEEGDEGAIDMGRHESFDAAEELAADEYGGD-------GWAGAEVVEDG-FDVGAVGEVVELDDGGADAEAEEEAFDHGAHAAAAHAEHHHR

Query:  IALRQLPHHLVR
         ALR+ P H +R
Subjt:  IALRQLPHHLVR

GER28086.1 glycosyl hydrolase family protein with chitinaseinsertion domain [Striga asiatica]4.7e-0738.02Show/hide
Query:  LRRGDGESEPESAGLFEEGDEGAIDMGRHESFDAAEELAADEYGGDGW----AGAEVVEDGFDVGAVGEVVELDDGGADAEAEEEAFDHGAHAAAAHAEH
        + +G  +S P+S G+FEE DE A+D+  H+  D++  L AD+   +      A  E  E+G D+ + G  V+LDDG   A+A+E+  DH AHAAA + EH
Subjt:  LRRGDGESEPESAGLFEEGDEGAIDMGRHESFDAAEELAADEYGGDGW----AGAEVVEDGFDVGAVGEVVELDDGGADAEAEEEAFDHGAHAAAAHAEH

Query:  HHRIALRQLPHHLVRVARRHR
        HH +   +    L R    HR
Subjt:  HHRIALRQLPHHLVRVARRHR

KAA0052529.1 hypothetical protein E6C27_scaffold120G001300 [Cucumis melo var. makuwa]3.1e-1960.38Show/hide
Query:  SEPESAGLFEEGDEGAIDMGRHESFDAAEELAADEYGGD--GWAGAEVVEDGFDV--GAVGEVVELDDGGADAEAEEEAFDHGAHAAAAHAEHHHRIALR
        SEPESAGLFEE ++ AID+ RHESF+A EEL  DE+G D     G E+VE+G ++  G V +++ELD+GG D +AEEEA D GAHA AA AE++HRIALR
Subjt:  SEPESAGLFEEGDEGAIDMGRHESFDAAEELAADEYGGD--GWAGAEVVEDGFDV--GAVGEVVELDDGGADAEAEEEAFDHGAHAAAAHAEHHHRIALR

Query:  QLPHHL
        +LP HL
Subjt:  QLPHHL

KAG6594452.1 hypothetical protein SDJN03_11005, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1158.7Show/hide
Query:  MGRHESFDAAEELAADEYGGD--GWAGAEVVEDGFDV---GAVGEVVELDDGGADAEAEEEAFDHGAHAAAAHAEHHHRIALRQLPHHLVRV
        MGRHESF+A EELAAD+  G+  G    EVVE+G DV   G +GEV+ELDD GAD EAEEEA D GAH AAA AE++  IA  Q+   +VR+
Subjt:  MGRHESFDAAEELAADEYGGD--GWAGAEVVEDGFDV---GAVGEVVELDDGGADAEAEEEAFDHGAHAAAAHAEHHHRIALRQLPHHLVRV

RAL50253.1 hypothetical protein DM860_007927 [Cuscuta australis]1.0e-1456.76Show/hide
Query:  GDGESEPESAGLFEEGDEGAIDMGRHESFDAAEELAADEYGGDG--WAG-AEVVEDGFDVGAVGEVVELDDGGADAEAEEEAFDHGAHAAAAHAEHHHRI
        GD  SEPES+G+F+E DEGA+D+  H   D A+EL ADE   DG   AG  E  E+G D  AVG  VEL D GA  EAEEE   H AHAAAAH E HH +
Subjt:  GDGESEPESAGLFEEGDEGAIDMGRHESFDAAEELAADEYGGDG--WAG-AEVVEDGFDVGAVGEVVELDDGGADAEAEEEAFDHGAHAAAAHAEHHHRI

Query:  ALRQLPHHLVR
          RQLP  LVR
Subjt:  ALRQLPHHLVR

TrEMBL top hitse value%identityAlignment
A0A059B5Z5 Uncharacterized protein9.0e-0440.37Show/hide
Query:  EPESAGLFEEGDEGAIDMGRHESFDAAEELAADEYGGDGWAGAEVVEDGFDVGAVGEVVELDDGGADAEAEEEAFDHGAHAAAAHAEHHHRIALRQLPHH
        EP+ AG+ E   E A ++  H+     +EL  DE GGDG A AE  +    +     +VEL DG A  E  E+A    AHAA A AE+HHR+  RQL + 
Subjt:  EPESAGLFEEGDEGAIDMGRHESFDAAEELAADEYGGDGWAGAEVVEDGFDVGAVGEVVELDDGGADAEAEEEAFDHGAHAAAAHAEHHHRIALRQLPHH

Query:  LVRVARRHR
        + R+  R R
Subjt:  LVRVARRHR

A0A328E1C8 Uncharacterized protein5.1e-1556.76Show/hide
Query:  GDGESEPESAGLFEEGDEGAIDMGRHESFDAAEELAADEYGGDG--WAG-AEVVEDGFDVGAVGEVVELDDGGADAEAEEEAFDHGAHAAAAHAEHHHRI
        GD  SEPES+G+F+E DEGA+D+  H   D A+EL ADE   DG   AG  E  E+G D  AVG  VEL D GA  EAEEE   H AHAAAAH E HH +
Subjt:  GDGESEPESAGLFEEGDEGAIDMGRHESFDAAEELAADEYGGDG--WAG-AEVVEDGFDVGAVGEVVELDDGGADAEAEEEAFDHGAHAAAAHAEHHHRI

Query:  ALRQLPHHLVR
          RQLP  LVR
Subjt:  ALRQLPHHLVR

A0A5A7P6I1 Glycosyl hydrolase family protein with chitinaseinsertion domain2.3e-0738.02Show/hide
Query:  LRRGDGESEPESAGLFEEGDEGAIDMGRHESFDAAEELAADEYGGDGW----AGAEVVEDGFDVGAVGEVVELDDGGADAEAEEEAFDHGAHAAAAHAEH
        + +G  +S P+S G+FEE DE A+D+  H+  D++  L AD+   +      A  E  E+G D+ + G  V+LDDG   A+A+E+  DH AHAAA + EH
Subjt:  LRRGDGESEPESAGLFEEGDEGAIDMGRHESFDAAEELAADEYGGDGW----AGAEVVEDGFDVGAVGEVVELDDGGADAEAEEEAFDHGAHAAAAHAEH

Query:  HHRIALRQLPHHLVRVARRHR
        HH +   +    L R    HR
Subjt:  HHRIALRQLPHHLVRVARRHR

A0A5A7UGA5 Uncharacterized protein1.5e-1960.38Show/hide
Query:  SEPESAGLFEEGDEGAIDMGRHESFDAAEELAADEYGGD--GWAGAEVVEDGFDV--GAVGEVVELDDGGADAEAEEEAFDHGAHAAAAHAEHHHRIALR
        SEPESAGLFEE ++ AID+ RHESF+A EEL  DE+G D     G E+VE+G ++  G V +++ELD+GG D +AEEEA D GAHA AA AE++HRIALR
Subjt:  SEPESAGLFEEGDEGAIDMGRHESFDAAEELAADEYGGD--GWAGAEVVEDGFDV--GAVGEVVELDDGGADAEAEEEAFDHGAHAAAAHAEHHHRIALR

Query:  QLPHHL
        +LP HL
Subjt:  QLPHHL

C0P435 Uncharacterized protein9.6e-0643.75Show/hide
Query:  SEPESAGLFEEGDEGAIDMGRHESFDAAEELAADEYGGD-------GWAGAEVVEDG-FDVGAVGEVVELDDGGADAEAEEEAFDHGAHAAAAHAEHHHR
        S+PE AG+ E+  EGA+D+  H++   A++ AADE+ G        G  GAE    G   + A   VV+L      A A EEA    AHAA AHAEHHHR
Subjt:  SEPESAGLFEEGDEGAIDMGRHESFDAAEELAADEYGGD-------GWAGAEVVEDG-FDVGAVGEVVELDDGGADAEAEEEAFDHGAHAAAAHAEHHHR

Query:  IALRQLPHHLVR
         ALR+ P H +R
Subjt:  IALRQLPHHLVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTGTTAAGACGTGGGGATGGAGAGTCAGAGCCAGAGAGCGCCGGCCTGTTTGAGGAGGGGGACGAGGGTGCCATTGATATGGGAAGACATGAGAGTTTCGACGC
CGCCGAGGAACTTGCCGCCGACGAATACGGCGGGGATGGGTGGGCCGGGGCGGAGGTGGTGGAGGACGGCTTCGATGTCGGGGCCGTGGGAGAGGTGGTCGAGCTCGACG
ACGGTGGGGCCGACGCCGAGGCCGAAGAGGAGGCGTTTGACCACGGTGCACATGCAGCAGCCGCTCATGCTGAACACCACCACCGCATTGCACTCCGCCAGCTGCCGCAC
CACCTCGTACGGGTTGCTCGCCGCCACCGGCCGACCAGCTTCCATGGAAATTGTGGATTTGTTGGCCACTTGCATGGTTCTAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GTTGAAAAGAGAGGAATTGGCGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTTGTTAAGACGTGGGGATGGAGAGTCAGAGCCAGAGAGCGCCGGCCTGTTTGAGGAGGGGGACGAGGGTGCCATTGATATGGGAAGACATGAGAGTTTCGACGC
CGCCGAGGAACTTGCCGCCGACGAATACGGCGGGGATGGGTGGGCCGGGGCGGAGGTGGTGGAGGACGGCTTCGATGTCGGGGCCGTGGGAGAGGTGGTCGAGCTCGACG
ACGGTGGGGCCGACGCCGAGGCCGAAGAGGAGGCGTTTGACCACGGTGCACATGCAGCAGCCGCTCATGCTGAACACCACCACCGCATTGCACTCCGCCAGCTGCCGCAC
CACCTCGTACGGGTTGCTCGCCGCCACCGGCCGACCAGCTTCCATGGAAATTGTGGATTTGTTGGCCACTTGCATGGTTCTAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GTTGAAAAGAGAGGAATTGGCGGAGTGA
Protein sequenceShow/hide protein sequence
MNLLRRGDGESEPESAGLFEEGDEGAIDMGRHESFDAAEELAADEYGGDGWAGAEVVEDGFDVGAVGEVVELDDGGADAEAEEEAFDHGAHAAAAHAEHHHRIALRQLPH
HLVRVARRHRPTSFHGNCGFVGHLHGSRERERERERELKREELAE