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MS026032 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026032
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold325:71279..71782
RNA-Seq ExpressionMS026032
SyntenyMS026032
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG50764.1 hypothetical protein EZV62_023288 [Acer yangbiense]2.1e-2438.41Show/hide
Query:  KGYRWRIGSSLGVDILEDPWLPRIGNFK---PTFVHNSLENCKVASLIKAPGVWNEDAIRNGFQEDEVDLILNIPPSKNSNKDEITWGFDNKGLFKVKSA
        +G R RIG    + + +D W+PR G F+   P  +H   EN  V+ L++  G W++  +R+ F  DEV+LIL+IP S N  +D   W FD KG F +KSA
Subjt:  KGYRWRIGSSLGVDILEDPWLPRIGNFK---PTFVHNSLENCKVASLIKAPGVWNEDAIRNGFQEDEVDLILNIPPSKNSNKDEITWGFDNKGLFKVKSA

Query:  YRLGIKFQDPMLASSSNDDILGRWWKRFWKVQVLLKILICYWKIIQDIIPTKANLGSKGIVTNN
        Y++ +  Q    AS S    L  WWK+ W +++  KI I YWK  ++I+PT   L  +G+V ++
Subjt:  YRLGIKFQDPMLASSSNDDILGRWWKRFWKVQVLLKILICYWKIIQDIIPTKANLGSKGIVTNN

VVA37427.1 PREDICTED: reverse mRNAase, partial [Prunus dulcis]7.3e-2238.27Show/hide
Query:  KGYRWRIGSSLGVDILEDPWLPRIGNFK---PTFVHNSLENCKVASLIKAPG-VWNEDAIRNGFQEDEVDLILNIPPSKNSNKDEITWGFDNKGLFKVKS
        +G RW++GS   + I ED WLP+  +F+   P   H+++   KV+ LI      WN   ++N F  +EV LI +IP S     D + W +D KG+F VKS
Subjt:  KGYRWRIGSSLGVDILEDPWLPRIGNFK---PTFVHNSLENCKVASLIKAPG-VWNEDAIRNGFQEDEVDLILNIPPSKNSNKDEITWGFDNKGLFKVKS

Query:  AYRLGIKFQDPM-LASSSNDDILGRWWKRFWKVQVLLKILICYWKIIQDIIPTKANLGSKGI
        AY +          ASSSN D + R W   WK  V  ++ I +W++I  I+PTKANL  K +
Subjt:  AYRLGIKFQDPM-LASSSNDDILGRWWKRFWKVQVLLKILICYWKIIQDIIPTKANLGSKGI

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]1.9e-2244.14Show/hide
Query:  FTKGYRWRIGSSLGVDILEDPWLPRIGNFKPTFVHNSLENCKVASLIKAPGVWNEDAIRNGFQEDEVDLILNIPPSKNSNKDEITWGFDNKGLFKVKSAY
        F KGYRW++G+   +++  DPWLPR GNF P F H  + N  VA L++  G W+E  +R  F   E D+IL  P       DEI WG D  G+F V+SAY
Subjt:  FTKGYRWRIGSSLGVDILEDPWLPRIGNFKPTFVHNSLENCKVASLIKAPGVWNEDAIRNGFQEDEVDLILNIPPSKNSNKDEITWGFDNKGLFKVKSAY

Query:  RLGIKFQDPML
         LGI+    +L
Subjt:  RLGIKFQDPML

XP_030502765.1 uncharacterized protein LOC115717936 [Cannabis sativa]9.5e-2235.19Show/hide
Query:  KGYRWRIGSSLGVDILEDPWLPRIGNFKPTFVHNSLENCKVASLIKAPGVWNEDAIRNGFQEDEVDLILNIPPSKNSNKDEITWGFDNKGLFKVKSAYRL
        KG RWR+GS L ++   D W+P    FKP F   +  N  VA LI     W+  +++  F + +VD IL+IP S   + D + W     G++ VKS Y+L
Subjt:  KGYRWRIGSSLGVDILEDPWLPRIGNFKPTFVHNSLENCKVASLIKAPGVWNEDAIRNGFQEDEVDLILNIPPSKNSNKDEITWGFDNKGLFKVKSAYRL

Query:  GIKF--QDPMLASSSNDDILGRWWKRFWKVQVLLKILICYWKIIQDIIPTKANLGSKGIVTN
         +    QD   +SSS    +  WW  FWKV++  K+ I  WK+    +P  A L  + I T+
Subjt:  GIKF--QDPMLASSSNDDILGRWWKRFWKVQVLLKILICYWKIIQDIIPTKANLGSKGIVTN

XP_038718167.1 uncharacterized protein LOC120011171 [Tripterygium wilfordii]2.5e-2240.38Show/hide
Query:  KGYRWRIGSSLGVDILEDPWLPRIGNFKPTFVHNS-LENCKVASLI-KAPGVWNEDAIRNGFQEDEVDLILNIPPSKNSNKDEITWGFDNKGLFKVKSAY
        +G RWRIGS LG+ I  DPWLP   NFKP    ++ +    VASLI   P  WN + +R+ F   E D IL+IP ++  + D I W +++ G + VKSAY
Subjt:  KGYRWRIGSSLGVDILEDPWLPRIGNFKPTFVHNS-LENCKVASLI-KAPGVWNEDAIRNGFQEDEVDLILNIPPSKNSNKDEITWGFDNKGLFKVKSAY

Query:  RLGI--KFQDPMLASSSNDDILGRWWKRFWKVQVLLKILICYWKIIQDIIPTKANL
           +  K Q+    SSS  D +G  W + W +QV  KI    W +I + +PT +NL
Subjt:  RLGI--KFQDPMLASSSNDDILGRWWKRFWKVQVLLKILICYWKIIQDIIPTKANL

TrEMBL top hitse value%identityAlignment
A0A5C7H1A9 zf-RVT domain-containing protein9.9e-2538.41Show/hide
Query:  KGYRWRIGSSLGVDILEDPWLPRIGNFK---PTFVHNSLENCKVASLIKAPGVWNEDAIRNGFQEDEVDLILNIPPSKNSNKDEITWGFDNKGLFKVKSA
        +G R RIG    + + +D W+PR G F+   P  +H   EN  V+ L++  G W++  +R+ F  DEV+LIL+IP S N  +D   W FD KG F +KSA
Subjt:  KGYRWRIGSSLGVDILEDPWLPRIGNFK---PTFVHNSLENCKVASLIKAPGVWNEDAIRNGFQEDEVDLILNIPPSKNSNKDEITWGFDNKGLFKVKSA

Query:  YRLGIKFQDPMLASSSNDDILGRWWKRFWKVQVLLKILICYWKIIQDIIPTKANLGSKGIVTNN
        Y++ +  Q    AS S    L  WWK+ W +++  KI I YWK  ++I+PT   L  +G+V ++
Subjt:  YRLGIKFQDPMLASSSNDDILGRWWKRFWKVQVLLKILICYWKIIQDIIPTKANLGSKGIVTNN

A0A803NGM9 Uncharacterized protein9.9e-2534.91Show/hide
Query:  MWS---FTKGYRWRIGSSLGVDILEDPWLPRIGNFKPTFVHNSLENCKVASLIKAPGVWNEDAIRNGFQEDEVDLILNIPPSKNSNKDEITWGFDNKGLF
        MW       GYRWR+G+   V +LEDPWLPR  +FK        EN  VA L    G W+E+ +R+ F  ++ +LIL++P +    +D+I W +   G +
Subjt:  MWS---FTKGYRWRIGSSLGVDILEDPWLPRIGNFKPTFVHNSLENCKVASLIKAPGVWNEDAIRNGFQEDEVDLILNIPPSKNSNKDEITWGFDNKGLF

Query:  KVKSAYRLGIKFQDPMLASSSNDDILGRWWKRFWKVQVLLKILICYWKIIQDIIPTKANLGSKGIVTNN
         VKS Y++            S+D +   WWK  W++++  KI    WK++ + IPT ANL  +G+  +N
Subjt:  KVKSAYRLGIKFQDPMLASSSNDDILGRWWKRFWKVQVLLKILICYWKIIQDIIPTKANLGSKGIVTNN

A0A803P9P5 Uncharacterized protein2.9e-2435.81Show/hide
Query:  TKGYRWRIGSSLGVDILEDPWLPRIGNFKPTFVHNSLENCKVASLIKAPGVWNEDAIRNGFQEDEVDLILNIPPSKNSNKDEITWGFDNKGLFKVKSAYR
        TKG RW++G+   +    DPWLP I +FKP    N   + KV+ LI     WN   ++  F E +V  I +IP +     D++ W F+N G++ VKS Y 
Subjt:  TKGYRWRIGSSLGVDILEDPWLPRIGNFKPTFVHNSLENCKVASLIKAPGVWNEDAIRNGFQEDEVDLILNIPPSKNSNKDEITWGFDNKGLFKVKSAYR

Query:  LGIKFQDPMLASSSNDDILGRWWKRFWKVQVLLKILICYWKIIQDIIP
        L  + ++ + A+SSN+ +  +WWK+FW + +  KI I  W+ + D +P
Subjt:  LGIKFQDPMLASSSNDDILGRWWKRFWKVQVLLKILICYWKIIQDIIP

A0A803Q1K6 Uncharacterized protein3.8e-2436.25Show/hide
Query:  KGYRWRIGSSLGVDILEDPWLPRIGNFKPTFVHNSLENCKVASLIKAPGVWNEDAIRNGFQEDEVDLILNIPPSKNSNKDEITWGFDNKGLFKVKSAYRL
        KGYRWR+G+   V +LEDPWLPR   FK     +   N  V  L  A G W+E +IR+ F   + DLIL IP S    +D+I W +   G + VKS YR+
Subjt:  KGYRWRIGSSLGVDILEDPWLPRIGNFKPTFVHNSLENCKVASLIKAPGVWNEDAIRNGFQEDEVDLILNIPPSKNSNKDEITWGFDNKGLFKVKSAYRL

Query:  GIKFQDPMLASSSNDDILGRWWKRFWKVQVLLKILICYWKIIQDIIPTKANLGSKGIVTN
                    SN+  + +WWK+ W++    K+    WK+  + +P   NL  +GI ++
Subjt:  GIKFQDPMLASSSNDDILGRWWKRFWKVQVLLKILICYWKIIQDIIPTKANLGSKGIVTN

A0A803QQT2 Uncharacterized protein3.4e-2537.5Show/hide
Query:  KGYRWRIGSSLGVDILEDPWLPRIGNFKPTFVHNSLENCKVASLIKAPGVWNEDAIRNGFQEDEVDLILNIPPSKNSNKDEITWGFDNKGLFKVKSAYRL
        KGYRWR+G+   V +LEDPWLPR   FK     +   N  V  L  A G W+E  IR+ F   +VDLIL IP S    +D+I W +   G + VKS YR+
Subjt:  KGYRWRIGSSLGVDILEDPWLPRIGNFKPTFVHNSLENCKVASLIKAPGVWNEDAIRNGFQEDEVDLILNIPPSKNSNKDEITWGFDNKGLFKVKSAYRL

Query:  GIKFQDPMLASSSNDDILGRWWKRFWKVQVLLKILICYWKIIQDIIPTKANLGSKGIVTN
           F        SN+  + +WWK+ W++++  K+    WK+  + +P   NL  +GI ++
Subjt:  GIKFQDPMLASSSNDDILGRWWKRFWKVQVLLKILICYWKIIQDIIPTKANLGSKGIVTN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTCTTTCACGAAGGGATACCGATGGAGGATTGGCTCGAGTCTGGGTGTGGATATCTTGGAAGATCCGTGGCTTCCTAGAATTGGAAATTTTAAGCCCACTTTTGT
GCACAACTCTCTGGAGAATTGCAAGGTCGCGTCGCTAATTAAGGCTCCCGGGGTGTGGAATGAAGATGCTATTAGGAACGGTTTCCAGGAAGATGAAGTTGACTTGATCC
TCAATATTCCCCCTAGCAAGAATAGCAACAAGGATGAGATTACTTGGGGCTTTGACAATAAAGGTCTTTTTAAGGTTAAAAGCGCCTACAGATTGGGTATTAAATTTCAG
GACCCTATGTTAGCTTCATCCTCGAACGATGACATTTTGGGTAGATGGTGGAAGAGATTCTGGAAAGTTCAAGTCCTTCTTAAGATCTTAATTTGCTACTGGAAGATCAT
TCAAGATATCATTCCAACCAAGGCAAACCTTGGCTCCAAAGGCATTGTAACTAATAACGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGTCTTTCACGAAGGGATACCGATGGAGGATTGGCTCGAGTCTGGGTGTGGATATCTTGGAAGATCCGTGGCTTCCTAGAATTGGAAATTTTAAGCCCACTTTTGT
GCACAACTCTCTGGAGAATTGCAAGGTCGCGTCGCTAATTAAGGCTCCCGGGGTGTGGAATGAAGATGCTATTAGGAACGGTTTCCAGGAAGATGAAGTTGACTTGATCC
TCAATATTCCCCCTAGCAAGAATAGCAACAAGGATGAGATTACTTGGGGCTTTGACAATAAAGGTCTTTTTAAGGTTAAAAGCGCCTACAGATTGGGTATTAAATTTCAG
GACCCTATGTTAGCTTCATCCTCGAACGATGACATTTTGGGTAGATGGTGGAAGAGATTCTGGAAAGTTCAAGTCCTTCTTAAGATCTTAATTTGCTACTGGAAGATCAT
TCAAGATATCATTCCAACCAAGGCAAACCTTGGCTCCAAAGGCATTGTAACTAATAACGGATAG
Protein sequenceShow/hide protein sequence
MWSFTKGYRWRIGSSLGVDILEDPWLPRIGNFKPTFVHNSLENCKVASLIKAPGVWNEDAIRNGFQEDEVDLILNIPPSKNSNKDEITWGFDNKGLFKVKSAYRLGIKFQ
DPMLASSSNDDILGRWWKRFWKVQVLLKILICYWKIIQDIIPTKANLGSKGIVTNNG