; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS026072 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026072
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription factor SPATULA-like
Genome locationscaffold239:1946654..1948521
RNA-Seq ExpressionMS026072
SyntenyMS026072
Gene Ontology termsGO:0016310 - phosphorylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0016301 - kinase activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR031066 - Basic helix-loop-helix (bHLH) transcription factors ALC-like, plant
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604171.1 Transcription factor SPATULA, partial [Cucurbita argyrosperma subsp. sororia]1.7e-13069.83Show/hide
Query:  SNSDKCYQNAC--STWTLPVPVPVPAAVSSSPSPPDEFSLFLQQILLRSSSPTPHS-------SPSIFSNLACNIH---PSHASS-----VLRLPDDIFA
        S S+ C QNAC  STWTLP      AAVSSS SPPDE SLFLQQ+LLRSSS  PHS       SPSIFS L CNI    P+H  S        +P++I  
Subjt:  SNSDKCYQNAC--STWTLPVPVPVPAAVSSSPSPPDEFSLFLQQILLRSSSPTPHS-------SPSIFSNLACNIH---PSHASS-----VLRLPDDIFA

Query:  VHSS-QLLNSSSSALLHDPSPSCPTPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQ
        V +S Q  N SSS ++HDP  SCPTP  PNASS  +GASDQ END+F+CES EGLEA VE++PTK NPRSSSKRSRAAEVHN+SEKRRRSRINEKMKALQ
Subjt:  VHSS-QLLNSSSSALLHDPSPSCPTPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQ

Query:  NLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIGR-
        NL+PNSNKTDKASMLD+AIEYLKQLQLQ+QMLSMRHGLSLHPMNL GSLQYLQLS MRMDFGE ++SL SDQERPN IFLSLPD++AAS+HPFM DIGR 
Subjt:  NLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIGR-

Query:  --ETPFELEPSIQAHLIPFYLSES--SKEICRDVPQDHQVN-VSQSETTPFVSRPYNIP-EPDLQELQNSVSVEHCIIEGNQSASTQEDQLKQHSCIDKD
          +TPFEL P IQ HL+PFYLS S  SKEICR+  +DHQVN + QSETTPF+S   NIP  PDL+EL+N VS+E CIIE N+SASTQ  QLKQ SC D+D
Subjt:  --ETPFELEPSIQAHLIPFYLSES--SKEICRDVPQDHQVN-VSQSETTPFVSRPYNIP-EPDLQELQNSVSVEHCIIEGNQSASTQEDQLKQHSCIDKD

Query:  C
        C
Subjt:  C

XP_022132497.1 transcription factor SPATULA-like [Momordica charantia]7.1e-20698.95Show/hide
Query:  MEDSSSNSDKCYQNACSTWTLPVPVPVPAAVSSSPSPPDEFSLFLQQILLRSSSPTPHSSPSIFSNLACNIHPSHASSVLRLPDDIFAVHSSQLLNSSSS
        MEDSSSNSDKCYQNACSTWTL  PVPVPAAVSSSPSPPDEFSLFLQQILLRSSS TPHSSPSIFSNL+CNIHPSHASSVLRLPDDIFAVHSSQLLNSSSS
Subjt:  MEDSSSNSDKCYQNACSTWTLPVPVPVPAAVSSSPSPPDEFSLFLQQILLRSSSPTPHSSPSIFSNLACNIHPSHASSVLRLPDDIFAVHSSQLLNSSSS

Query:  ALLHDPSPSCPTPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKAS
        ALLHDPSPSCPTPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKAS
Subjt:  ALLHDPSPSCPTPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKAS

Query:  MLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIGRETPFELEPSIQAHL
        MLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIGRETPFELEPSIQAHL
Subjt:  MLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIGRETPFELEPSIQAHL

Query:  IPFYLSESSKEICRDVPQDHQVNVSQSETTPFVSRPYNIPEPDLQELQNSVSVEHCIIEGNQSASTQEDQLKQHSCIDKDC
        IPFYLSESSKEICRDVPQDHQVNVSQSETTPFVSRPYNIPEPDLQELQNSVSVEHCIIEGNQSASTQEDQLKQHSCIDKDC
Subjt:  IPFYLSESSKEICRDVPQDHQVNVSQSETTPFVSRPYNIPEPDLQELQNSVSVEHCIIEGNQSASTQEDQLKQHSCIDKDC

XP_022977205.1 transcription factor SPATULA-like isoform X1 [Cucurbita maxima]1.4e-12969.15Show/hide
Query:  SNSDKCYQNAC--STWTLPVPVPVPAAVSSSPSPPDEFSLFLQQILLRSSSPTPHS-------SPSIFSNLACNIH----PSHASS-----VLRLPDDIF
        S S+ C QNAC  STWTLP      AAVSSS SPPDE SLFLQQ+LLRSSS  PHS       SPSIFS L CNI     P+H  S        +P++I 
Subjt:  SNSDKCYQNAC--STWTLPVPVPVPAAVSSSPSPPDEFSLFLQQILLRSSSPTPHS-------SPSIFSNLACNIH----PSHASS-----VLRLPDDIF

Query:  AVHSS-QLLNSSSSALLHDPSPSCPTPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKAL
         V +S Q  N S S ++HDP  SCPTP  PNASS  +GASD  END+F+CES EGLEA VE++PTK NPRSSSKRSRAAEVHNLSEKRRRSRINEKMKAL
Subjt:  AVHSS-QLLNSSSSALLHDPSPSCPTPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKAL

Query:  QNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIGR
        QNL+PNSNKTDKASMLD+AIEYLKQLQLQ+QML MRH LSLHPMNL GSLQYLQLS MRMDFGE ++SL SDQERPN IFLSLPD++AAS+HPFM DIGR
Subjt:  QNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIGR

Query:  ---ETPFELEPSIQAHLIPFYLSES--SKEICRDVPQDHQVN-VSQSETTPFVSRPYNIP-EPDLQELQNSVSVEHCIIEGNQSASTQEDQLKQHSCIDK
           +TPFEL P IQ HL+PFYLS S  SKEICR+  +DHQVN + QSETTPF+S P NIP  PDL+ELQN VS+E CIIE N+SASTQ +QLKQ SC D+
Subjt:  ---ETPFELEPSIQAHLIPFYLSES--SKEICRDVPQDHQVN-VSQSETTPFVSRPYNIP-EPDLQELQNSVSVEHCIIEGNQSASTQEDQLKQHSCIDK

Query:  DC
        +C
Subjt:  DC

XP_023544854.1 transcription factor SPATULA-like [Cucurbita pepo subsp. pepo]6.8e-13270.22Show/hide
Query:  SNSDKCYQNAC--STWTLPVPVPVPAAVSSSPSPPDEFSLFLQQILLRSSSPTPHS-------SPSIFSNLACNIH----PSHASS-----VLRLPDDIF
        S S+ C QNAC  STWTLP      AAVSSS SPPDE SLFLQQ+LLRSSS  PHS       SPSIFS L CNI     P+H  S        +P++I 
Subjt:  SNSDKCYQNAC--STWTLPVPVPVPAAVSSSPSPPDEFSLFLQQILLRSSSPTPHS-------SPSIFSNLACNIH----PSHASS-----VLRLPDDIF

Query:  AVHSS-QLLNSSSSALLHDPSPSCPTPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVE-EMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKA
         V +S Q  N SSS ++HDP  SCPTP  PNASS  +GASDQ END+F+CES EGLEA VE ++PTK NPRSSSKRSRAAEVHN+SEKRRRSRINEKMKA
Subjt:  AVHSS-QLLNSSSSALLHDPSPSCPTPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVE-EMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKA

Query:  LQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIG
        LQNL+PNSNKTDKASMLD+AIEYLKQLQLQ+QMLSMRHGLSLHPMNL GSLQYLQLS MRMDFGE ++SLPSDQERPN IFLSLPD++AAS+HPFM DIG
Subjt:  LQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIG

Query:  R---ETPFELEPSIQAHLIPFYLSES--SKEICRDVPQDHQVN-VSQSETTPFVSRPYNIP-EPDLQELQNSVSVEHCIIEGNQSASTQEDQLKQHSCID
        R   +TPFEL P IQ HL+PFYLS S  SKEICR+  +DHQVN + QSETTPF+S P +IP  PDLQELQN VS+E CIIE N+SASTQ +QLKQ SC D
Subjt:  R---ETPFELEPSIQAHLIPFYLSES--SKEICRDVPQDHQVN-VSQSETTPFVSRPYNIP-EPDLQELQNSVSVEHCIIEGNQSASTQEDQLKQHSCID

Query:  KDC
        +DC
Subjt:  KDC

XP_038883120.1 transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like isoform X3 [Benincasa hispida]1.9e-13472.98Show/hide
Query:  QNAC--STWTLPVPVPVPAAVSSSPSPPDEFSLFLQQILLRSSSPTPH-----SSPSIFSNLACNIH---------PSHASSVLRLPDDIFAVHSS-QLL
        +NAC  STWTLP      AA +SS SPPD+ SLFLQQILLRSSS   H      SPSIFS L CNI          P        +PD+I  V SS Q  
Subjt:  QNAC--STWTLPVPVPVPAAVSSSPSPPDEFSLFLQQILLRSSSPTPH-----SSPSIFSNLACNIH---------PSHASSVLRLPDDIFAVHSS-QLL

Query:  NSSSSALLHDPSPSCPTPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK
        NSSSS +LHDP  SCPTP  PNASSTS+GASD NEND+FDCESEEGLEA VEE+PTK NPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK
Subjt:  NSSSSALLHDPSPSCPTPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK

Query:  TDKASMLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIGR---ETPFEL
        TDKASMLDEAIEYLKQLQLQVQMLSMR+GLS+HPMN  GSLQYLQLSHMRMDFGEEN+S+ SDQERPN IFLSL D++AAS+HPFM DIGR   ETPFEL
Subjt:  TDKASMLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIGR---ETPFEL

Query:  EPSIQAHLIPFYLSES--SKEIC-RDV-PQDHQ--VNVSQSETTPFVSRPYNI-PEPDLQELQNSVSVEHCIIEGNQSASTQEDQLKQHSCIDKDC
         P IQAHL+PFYLSES  SKEIC R+V   DHQ  VNVSQSETTPFVSRPYNI   PDLQ LQN +SVE  I+EGN+SA TQE QLKQ SC D+ C
Subjt:  EPSIQAHLIPFYLSES--SKEIC-RDV-PQDHQ--VNVSQSETTPFVSRPYNI-PEPDLQELQNSVSVEHCIIEGNQSASTQEDQLKQHSCIDKDC

TrEMBL top hitse value%identityAlignment
A0A0A0KLD3 BHLH domain-containing protein8.9e-13073.44Show/hide
Query:  DKCYQNAC--STWTLPVPVPVPAAVSSSPSPPDEFSLFLQQILLRSSSPTPH-----SSPSIFSNLACNIH----PSH-----ASSVLRLPDDIFAVHSS
        + C +NAC  STWTL    P PA  SSS SPPD+ SLFLQQIL RSSS  PH      SPSIFS L CNI     P+H           +PD+I AV SS
Subjt:  DKCYQNAC--STWTLPVPVPVPAAVSSSPSPPDEFSLFLQQILLRSSSPTPH-----SSPSIFSNLACNIH----PSH-----ASSVLRLPDDIFAVHSS

Query:  -QLLNSSSSALLHDPSPSCPTPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIP
         Q  NS SS +LHDP  + PT   PNASSTS+GASD NEND+FDCESEEGLEA VEE+PTK NPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIP
Subjt:  -QLLNSSSSALLHDPSPSCPTPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIP

Query:  NSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIGR----E
        NSNKTDKASMLDEAIEYLKQLQLQVQMLSMR+GLSLHPMNL GSLQYLQLSHMRMDFGEEN+S+ SDQERPN IFLSLPD++AAS+HPFM DIGR    E
Subjt:  NSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIGR----E

Query:  TPFELEPSIQAHLIPFYLSES--SKEIC-RD-VPQDHQ---VNVSQSETTPFVSRPYNIPE-PDLQELQNSVSVEHCIIEGNQS
        TPFEL P IQAHL+PFYLSES  SKEIC RD +  DHQ   VNVSQSETTP VS PYNIPE PDLQ LQN +SVE CIIEGN+S
Subjt:  TPFELEPSIQAHLIPFYLSES--SKEIC-RD-VPQDHQ---VNVSQSETTPFVSRPYNIPE-PDLQELQNSVSVEHCIIEGNQS

A0A6J1BTZ7 transcription factor SPATULA-like3.4e-20698.95Show/hide
Query:  MEDSSSNSDKCYQNACSTWTLPVPVPVPAAVSSSPSPPDEFSLFLQQILLRSSSPTPHSSPSIFSNLACNIHPSHASSVLRLPDDIFAVHSSQLLNSSSS
        MEDSSSNSDKCYQNACSTWTL  PVPVPAAVSSSPSPPDEFSLFLQQILLRSSS TPHSSPSIFSNL+CNIHPSHASSVLRLPDDIFAVHSSQLLNSSSS
Subjt:  MEDSSSNSDKCYQNACSTWTLPVPVPVPAAVSSSPSPPDEFSLFLQQILLRSSSPTPHSSPSIFSNLACNIHPSHASSVLRLPDDIFAVHSSQLLNSSSS

Query:  ALLHDPSPSCPTPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKAS
        ALLHDPSPSCPTPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKAS
Subjt:  ALLHDPSPSCPTPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKAS

Query:  MLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIGRETPFELEPSIQAHL
        MLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIGRETPFELEPSIQAHL
Subjt:  MLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIGRETPFELEPSIQAHL

Query:  IPFYLSESSKEICRDVPQDHQVNVSQSETTPFVSRPYNIPEPDLQELQNSVSVEHCIIEGNQSASTQEDQLKQHSCIDKDC
        IPFYLSESSKEICRDVPQDHQVNVSQSETTPFVSRPYNIPEPDLQELQNSVSVEHCIIEGNQSASTQEDQLKQHSCIDKDC
Subjt:  IPFYLSESSKEICRDVPQDHQVNVSQSETTPFVSRPYNIPEPDLQELQNSVSVEHCIIEGNQSASTQEDQLKQHSCIDKDC

A0A6J1GF25 transcription factor SPATULA-like isoform X17.6e-12968.75Show/hide
Query:  SNSDKCYQNACSTWTLPVPVPVPAAVSSSPSPPDEFSLFLQQILLRSSSPTPHS-------SPSIFSNLACNIH----PSHASS-----VLRLPDDIFAV
        S S+ C QNACS+ T  +P    AAV SS SPPDE SLFLQQ+LLRSSS  PHS       SPSIFS   CNI     P+H  S        +P++I  V
Subjt:  SNSDKCYQNACSTWTLPVPVPVPAAVSSSPSPPDEFSLFLQQILLRSSSPTPHS-------SPSIFSNLACNIH----PSHASS-----VLRLPDDIFAV

Query:  HSS-QLLNSSSSALLHDPSPSCPTPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQN
         +S Q  N SSS ++HDP  SCPTP  PNASS  +GASD  END+F+CES EGLEA VE++PTK NPRSSSKRSRAAEVHN+SEKRRRSRINEKMKALQN
Subjt:  HSS-QLLNSSSSALLHDPSPSCPTPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQN

Query:  LIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIGR--
        L+PNSNKTDKASMLD+AIEYLKQLQLQ+QMLSMRHGLSLHPMNL GSLQYLQLS MRMDFGE ++SL SDQERPN IFLSLPD++AAS+HPFM DIGR  
Subjt:  LIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIGR--

Query:  -ETPFELEPSIQAHLIPFYLSES--SKEICRDVPQDHQVN-VSQSETTPFVSRPYNIP-EPDLQELQNSVSVEHCIIEGNQSASTQEDQLKQHSCIDKDC
         +TPFEL P IQ HL+PFYLS S  SKEICR+  +DHQVN + QSETTPF+S P NIP  PDL+EL+N VS+E CIIE N+SASTQ  QLKQ SC D+DC
Subjt:  -ETPFELEPSIQAHLIPFYLSES--SKEICRDVPQDHQVN-VSQSETTPFVSRPYNIP-EPDLQELQNSVSVEHCIIEGNQSASTQEDQLKQHSCIDKDC

A0A6J1IJ91 transcription factor SPATULA-like isoform X25.8e-12968.83Show/hide
Query:  SNSDKCYQNAC--STWTLPVPVPVPAAVSSSPSPPDEFSLFLQQILLRSSSPTPHS-------SPSIFSNLACNIH----PSHASS-----VLRLPDDIF
        S S+ C QNAC  STWTLP      AAVSSS SPPDE SLFLQQ+LLRSSS  PHS       SPSIFS L CNI     P+H  S        +P++I 
Subjt:  SNSDKCYQNAC--STWTLPVPVPVPAAVSSSPSPPDEFSLFLQQILLRSSSPTPHS-------SPSIFSNLACNIH----PSHASS-----VLRLPDDIF

Query:  AVHSS-QLLNSSSSALLHDPSPSCPTPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKAL
         V +S Q  N S S ++HDP  SCPTP  PNASS  +GASD  END+F+CES EGLEA VE++PTK NPRSSSKRSRAAEVHNLSEKRRRSRINEKMKAL
Subjt:  AVHSS-QLLNSSSSALLHDPSPSCPTPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKAL

Query:  QNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIGR
        QNL+PNSNKTDKASMLD+AIEYLKQLQLQ+QML MRH LSLHPMNL GSLQYLQLS MRMDFGE ++SL SDQERPN IFLSLPD++AAS+HPFM DIGR
Subjt:  QNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIGR

Query:  ---ETPFELEPSIQAHLIPFYLSESSK-EICRDVPQDHQVN-VSQSETTPFVSRPYNIP-EPDLQELQNSVSVEHCIIEGNQSASTQEDQLKQHSCIDKD
           +TPFEL P IQ HL+PFYLS S K +ICR+  +DHQVN + QSETTPF+S P NIP  PDL+ELQN VS+E CIIE N+SASTQ +QLKQ SC D++
Subjt:  ---ETPFELEPSIQAHLIPFYLSESSK-EICRDVPQDHQVN-VSQSETTPFVSRPYNIP-EPDLQELQNSVSVEHCIIEGNQSASTQEDQLKQHSCIDKD

Query:  C
        C
Subjt:  C

A0A6J1ILN5 transcription factor SPATULA-like isoform X16.8e-13069.15Show/hide
Query:  SNSDKCYQNAC--STWTLPVPVPVPAAVSSSPSPPDEFSLFLQQILLRSSSPTPHS-------SPSIFSNLACNIH----PSHASS-----VLRLPDDIF
        S S+ C QNAC  STWTLP      AAVSSS SPPDE SLFLQQ+LLRSSS  PHS       SPSIFS L CNI     P+H  S        +P++I 
Subjt:  SNSDKCYQNAC--STWTLPVPVPVPAAVSSSPSPPDEFSLFLQQILLRSSSPTPHS-------SPSIFSNLACNIH----PSHASS-----VLRLPDDIF

Query:  AVHSS-QLLNSSSSALLHDPSPSCPTPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKAL
         V +S Q  N S S ++HDP  SCPTP  PNASS  +GASD  END+F+CES EGLEA VE++PTK NPRSSSKRSRAAEVHNLSEKRRRSRINEKMKAL
Subjt:  AVHSS-QLLNSSSSALLHDPSPSCPTPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKAL

Query:  QNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIGR
        QNL+PNSNKTDKASMLD+AIEYLKQLQLQ+QML MRH LSLHPMNL GSLQYLQLS MRMDFGE ++SL SDQERPN IFLSLPD++AAS+HPFM DIGR
Subjt:  QNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIGR

Query:  ---ETPFELEPSIQAHLIPFYLSES--SKEICRDVPQDHQVN-VSQSETTPFVSRPYNIP-EPDLQELQNSVSVEHCIIEGNQSASTQEDQLKQHSCIDK
           +TPFEL P IQ HL+PFYLS S  SKEICR+  +DHQVN + QSETTPF+S P NIP  PDL+ELQN VS+E CIIE N+SASTQ +QLKQ SC D+
Subjt:  ---ETPFELEPSIQAHLIPFYLSES--SKEICRDVPQDHQVN-VSQSETTPFVSRPYNIP-EPDLQELQNSVSVEHCIIEGNQSASTQEDQLKQHSCIDK

Query:  DC
        +C
Subjt:  DC

SwissProt top hitse value%identityAlignment
Q0JNI9 Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 154.1e-2359.09Show/hide
Query:  DCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAG
        +C + +  +   E    +++   S+KRSR AEVHNLSE+RRR RINEKM+ALQ LIPN NK DKASMLDEAIEYLK LQLQVQM+SM  GL + PM L  
Subjt:  DCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAG

Query:  SLQYLQLSHM
        ++Q+LQ+  M
Subjt:  SLQYLQLSHM

Q6AT90 Transcription factor APG4.6e-2249.37Show/hide
Query:  SSALLHDPSPSCPTPTAPNASSTSLGASDQNENDDFDCESEEGLE--AFVEEMPT--------KRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQN
        S A   D  P   T TA   SS   G  D+ + +  D  + +  E  A  +E+          +R+   SSKRSR AEVHNLSE+RRR RINEKM+ALQ 
Subjt:  SSALLHDPSPSCPTPTAPNASSTSLGASDQNENDDFDCESEEGLE--AFVEEMPT--------KRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQN

Query:  LIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAGSLQYLQLSHMRM
        LIPN NK DKASML+EAIEYLK LQLQVQM+SM  G+ + PM L  +   +Q  HM+M
Subjt:  LIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNLAGSLQYLQLSHMRM

Q8GZM7 Transcription factor PIF12.0e-2248.32Show/hide
Query:  DQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLS
        D  +  + +  + +  E+  EE    R   +S+KRSRAAEVHNLSE++RR RINE+MKALQ LIP  NK+DKASMLDEAIEY+K LQLQ+QM+SM  G  
Subjt:  DQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLS

Query:  LHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAA
        + PM   G  QY  + HM M  G        +Q  P   F+  P+  AA
Subjt:  LHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAA

Q9FHA2 Transcription factor ALC1.1e-2041.41Show/hide
Query:  PSPPDEFSLFLQQILLRSSSPTPHSSPSIFSNLACNIHPSHASSVLRLPDDIFAVHSSQLLNSSSSALLHDPSPSCPTPTAPNASSTSLGASDQNENDDF
        PS  DE S FL+QIL R+ +  P S P                               +  N SS+          P+ +    SS   G S+  ++   
Subjt:  PSPPDEFSLFLQQILLRSSSPTPHSSPSIFSNLACNIHPSHASSVLRLPDDIFAVHSSQLLNSSSSALLHDPSPSCPTPTAPNASSTSLGASDQNENDDF

Query:  DCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNL
                +   E   +    R+S KR+  A+ HNLSEK+RRS+INEKMKALQ LIPNSNKTDKASMLDEAIEYLKQLQLQVQ L++ +GL L+PM L
Subjt:  DCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNL

Q9FUA4 Transcription factor SPATULA1.2e-4141.64Show/hide
Query:  PSPPDEFSLFLQQILLRSSSPTPHSSPSIFSNLACNI--------HPSHASSVLRLPDDIFAVHSSQLLNSSSSALLHDPSPSCP---------------
        PS  DE S FL+ I  RSS    + SP+  +  A  I        H  ++ S++       +V  S+ +   S  L+   S S                 
Subjt:  PSPPDEFSLFLQQILLRSSSPTPHSSPSIFSNLACNI--------HPSHASSVLRLPDDIFAVHSSQLLNSSSSALLHDPSPSCP---------------

Query:  -TPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVEEMPTKR---NPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIE
           +    SS+S+GAS  NE D++DCESEEG EA V+E P+ +   + RSSSKR RAAEVHNLSEKRRRSRINEKMKALQ+LIPNSNKTDKASMLDEAIE
Subjt:  -TPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVEEMPTKR---NPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIE

Query:  YLKQLQLQVQMLSMRHGLSLHPMNLAG-SLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIGRETPFELEPSIQAHLIPFYLS
        YLKQLQLQVQML+MR+G++LHP+ L G +L  LQLS +R              E  N   L+  ++ A++ +         + + LEPSI++H  PF L 
Subjt:  YLKQLQLQVQMLSMRHGLSLHPMNLAG-SLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIGRETPFELEPSIQAHLIPFYLS

Query:  ESSKEICRDVPQDH-QVNVSQSETTPFVSRPYNIPEPDLQE
         S  E+ R+    H ++N+  S       +     +PDL++
Subjt:  ESSKEICRDVPQDH-QVNVSQSETTPFVSRPYNIPEPDLQE

Arabidopsis top hitse value%identityAlignment
AT2G20180.1 phytochrome interacting factor 3-like 51.5e-2348.32Show/hide
Query:  DQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLS
        D  +  + +  + +  E+  EE    R   +S+KRSRAAEVHNLSE++RR RINE+MKALQ LIP  NK+DKASMLDEAIEY+K LQLQ+QM+SM  G  
Subjt:  DQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLS

Query:  LHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAA
        + PM   G  QY  + HM M  G        +Q  P   F+  P+  AA
Subjt:  LHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAA

AT2G20180.2 phytochrome interacting factor 3-like 51.5e-2348.32Show/hide
Query:  DQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLS
        D  +  + +  + +  E+  EE    R   +S+KRSRAAEVHNLSE++RR RINE+MKALQ LIP  NK+DKASMLDEAIEY+K LQLQ+QM+SM  G  
Subjt:  DQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLS

Query:  LHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAA
        + PM   G  QY  + HM M  G        +Q  P   F+  P+  AA
Subjt:  LHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAA

AT2G20180.3 phytochrome interacting factor 3-like 51.5e-2348.32Show/hide
Query:  DQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLS
        D  +  + +  + +  E+  EE    R   +S+KRSRAAEVHNLSE++RR RINE+MKALQ LIP  NK+DKASMLDEAIEY+K LQLQ+QM+SM  G  
Subjt:  DQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLS

Query:  LHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAA
        + PM   G  QY  + HM M  G        +Q  P   F+  P+  AA
Subjt:  LHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAA

AT4G36930.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein8.2e-4341.64Show/hide
Query:  PSPPDEFSLFLQQILLRSSSPTPHSSPSIFSNLACNI--------HPSHASSVLRLPDDIFAVHSSQLLNSSSSALLHDPSPSCP---------------
        PS  DE S FL+ I  RSS    + SP+  +  A  I        H  ++ S++       +V  S+ +   S  L+   S S                 
Subjt:  PSPPDEFSLFLQQILLRSSSPTPHSSPSIFSNLACNI--------HPSHASSVLRLPDDIFAVHSSQLLNSSSSALLHDPSPSCP---------------

Query:  -TPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVEEMPTKR---NPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIE
           +    SS+S+GAS  NE D++DCESEEG EA V+E P+ +   + RSSSKR RAAEVHNLSEKRRRSRINEKMKALQ+LIPNSNKTDKASMLDEAIE
Subjt:  -TPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVEEMPTKR---NPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIE

Query:  YLKQLQLQVQMLSMRHGLSLHPMNLAG-SLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIGRETPFELEPSIQAHLIPFYLS
        YLKQLQLQVQML+MR+G++LHP+ L G +L  LQLS +R              E  N   L+  ++ A++ +         + + LEPSI++H  PF L 
Subjt:  YLKQLQLQVQMLSMRHGLSLHPMNLAG-SLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIGRETPFELEPSIQAHLIPFYLS

Query:  ESSKEICRDVPQDH-QVNVSQSETTPFVSRPYNIPEPDLQE
         S  E+ R+    H ++N+  S       +     +PDL++
Subjt:  ESSKEICRDVPQDH-QVNVSQSETTPFVSRPYNIPEPDLQE

AT5G67110.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein8.0e-2241.41Show/hide
Query:  PSPPDEFSLFLQQILLRSSSPTPHSSPSIFSNLACNIHPSHASSVLRLPDDIFAVHSSQLLNSSSSALLHDPSPSCPTPTAPNASSTSLGASDQNENDDF
        PS  DE S FL+QIL R+ +  P S P                               +  N SS+          P+ +    SS   G S+  ++   
Subjt:  PSPPDEFSLFLQQILLRSSSPTPHSSPSIFSNLACNIHPSHASSVLRLPDDIFAVHSSQLLNSSSSALLHDPSPSCPTPTAPNASSTSLGASDQNENDDF

Query:  DCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNL
                +   E   +    R+S KR+  A+ HNLSEK+RRS+INEKMKALQ LIPNSNKTDKASMLDEAIEYLKQLQLQVQ L++ +GL L+PM L
Subjt:  DCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRHGLSLHPMNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATTCGAGTTCCAATTCCGACAAATGTTATCAAAATGCATGTTCGACCTGGACTCTTCCCGTTCCCGTTCCCGTTCCCGCCGCCGTCTCCTCCTCCCCTTCTCC
TCCCGACGAATTCTCTCTGTTTCTCCAACAGATTTTGCTACGTTCCTCTTCCCCCACTCCCCACTCCTCTCCCTCTATCTTTTCCAACCTTGCCTGCAACATCCACCCTT
CCCACGCTTCCAGTGTTCTGCGGCTGCCGGACGACATCTTCGCCGTCCATTCTTCTCAACTCCTCAATTCATCTTCCTCCGCTTTACTACATGATCCGTCGCCGTCTTGT
CCCACACCCACTGCACCCAATGCGTCTTCCACGTCGCTGGGAGCAAGTGATCAGAACGAAAACGACGACTTTGACTGCGAAAGTGAGGAGGGTCTAGAGGCATTCGTTGA
AGAAATGCCTACAAAGCGTAATCCTCGCAGTTCTTCCAAGAGAAGCAGAGCAGCCGAAGTTCATAATCTGTCCGAAAAGAGGAGGAGGAGCAGAATTAATGAGAAAATGA
AGGCCTTGCAAAATCTGATCCCCAATTCTAACAAGACAGACAAGGCCTCGATGCTGGACGAAGCAATCGAATATCTGAAGCAGCTTCAACTTCAAGTTCAGATGCTATCA
ATGAGACATGGCTTGAGTTTGCATCCTATGAACTTGGCTGGTAGTTTGCAATATCTCCAACTTTCCCACATGAGAATGGACTTTGGTGAAGAAAATAAGTCACTTCCTTC
GGACCAAGAGAGACCAAACCATATTTTTCTGAGTTTACCTGACAAAAGGGCTGCCTCAGTCCATCCTTTCATGCCAGATATTGGAAGAGAAACCCCATTTGAATTGGAGC
CTTCCATCCAGGCTCACCTAATCCCCTTCTACCTGAGTGAATCCTCCAAGGAGATTTGCAGAGATGTGCCGCAAGATCACCAAGTGAACGTGAGTCAGTCGGAGACAACT
CCCTTCGTTTCACGCCCCTATAACATACCAGAGCCTGATCTGCAAGAATTACAGAATAGTGTCTCTGTGGAACACTGCATCATTGAAGGAAATCAGTCAGCATCGACACA
GGAAGATCAGCTGAAACAACACAGCTGCATTGATAAAGATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATTCGAGTTCCAATTCCGACAAATGTTATCAAAATGCATGTTCGACCTGGACTCTTCCCGTTCCCGTTCCCGTTCCCGCCGCCGTCTCCTCCTCCCCTTCTCC
TCCCGACGAATTCTCTCTGTTTCTCCAACAGATTTTGCTACGTTCCTCTTCCCCCACTCCCCACTCCTCTCCCTCTATCTTTTCCAACCTTGCCTGCAACATCCACCCTT
CCCACGCTTCCAGTGTTCTGCGGCTGCCGGACGACATCTTCGCCGTCCATTCTTCTCAACTCCTCAATTCATCTTCCTCCGCTTTACTACATGATCCGTCGCCGTCTTGT
CCCACACCCACTGCACCCAATGCGTCTTCCACGTCGCTGGGAGCAAGTGATCAGAACGAAAACGACGACTTTGACTGCGAAAGTGAGGAGGGTCTAGAGGCATTCGTTGA
AGAAATGCCTACAAAGCGTAATCCTCGCAGTTCTTCCAAGAGAAGCAGAGCAGCCGAAGTTCATAATCTGTCCGAAAAGAGGAGGAGGAGCAGAATTAATGAGAAAATGA
AGGCCTTGCAAAATCTGATCCCCAATTCTAACAAGACAGACAAGGCCTCGATGCTGGACGAAGCAATCGAATATCTGAAGCAGCTTCAACTTCAAGTTCAGATGCTATCA
ATGAGACATGGCTTGAGTTTGCATCCTATGAACTTGGCTGGTAGTTTGCAATATCTCCAACTTTCCCACATGAGAATGGACTTTGGTGAAGAAAATAAGTCACTTCCTTC
GGACCAAGAGAGACCAAACCATATTTTTCTGAGTTTACCTGACAAAAGGGCTGCCTCAGTCCATCCTTTCATGCCAGATATTGGAAGAGAAACCCCATTTGAATTGGAGC
CTTCCATCCAGGCTCACCTAATCCCCTTCTACCTGAGTGAATCCTCCAAGGAGATTTGCAGAGATGTGCCGCAAGATCACCAAGTGAACGTGAGTCAGTCGGAGACAACT
CCCTTCGTTTCACGCCCCTATAACATACCAGAGCCTGATCTGCAAGAATTACAGAATAGTGTCTCTGTGGAACACTGCATCATTGAAGGAAATCAGTCAGCATCGACACA
GGAAGATCAGCTGAAACAACACAGCTGCATTGATAAAGATTGTTGA
Protein sequenceShow/hide protein sequence
MEDSSSNSDKCYQNACSTWTLPVPVPVPAAVSSSPSPPDEFSLFLQQILLRSSSPTPHSSPSIFSNLACNIHPSHASSVLRLPDDIFAVHSSQLLNSSSSALLHDPSPSC
PTPTAPNASSTSLGASDQNENDDFDCESEEGLEAFVEEMPTKRNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLS
MRHGLSLHPMNLAGSLQYLQLSHMRMDFGEENKSLPSDQERPNHIFLSLPDKRAASVHPFMPDIGRETPFELEPSIQAHLIPFYLSESSKEICRDVPQDHQVNVSQSETT
PFVSRPYNIPEPDLQELQNSVSVEHCIIEGNQSASTQEDQLKQHSCIDKDC