; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS026133 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026133
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLEUNIG_homolog
Genome locationscaffold11:676075..678735
RNA-Seq ExpressionMS026133
SyntenyMS026133
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR006594 - LIS1 homology motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_009132866.2 transcriptional corepressor LEUNIG_HOMOLOG-like isoform X4 [Brassica rapa]3.4e-0439.53Show/hide
Query:  MYIHDYLIKKKLHSTAKSFRTELKMDSILQHGINSEANGYLSTCWSAFWDVYFST------KSPLLFQEGPAVEDFGAKPPTATAT
        +YI DYL+KKKLH TAK F TE+K+     +    +  G+LS  WS FWDVY +       +S    Q+G   E      P  T T
Subjt:  MYIHDYLIKKKLHSTAKSFRTELKMDSILQHGINSEANGYLSTCWSAFWDVYFST------KSPLLFQEGPAVEDFGAKPPTATAT
XP_013629168.1 PREDICTED: transcriptional corepressor LEUNIG_HOMOLOG-like [Brassica oleracea var. oleracea]1.4e-0539.77Show/hide
Query:  MYIHDYLIKKKLHSTAKSFRTELKMDSILQHGINSEANGYLSTCWSAFWDVYFS------TKSPLLFQEGPAVEDFGAKPPTATATDP
        +YI+DYL+KKKLH TA SF TE+K+     H +     G+L   WS FWDVY +      ++S    Q+G   E    K P    T+P
Subjt:  MYIHDYLIKKKLHSTAKSFRTELKMDSILQHGINSEANGYLSTCWSAFWDVYFS------TKSPLLFQEGPAVEDFGAKPPTATATDP
XP_022571645.1 transcriptional corepressor LEUNIG_HOMOLOG-like [Brassica napus]3.4e-0439.53Show/hide
Query:  MYIHDYLIKKKLHSTAKSFRTELKMDSILQHGINSEANGYLSTCWSAFWDVYFST------KSPLLFQEGPAVEDFGAKPPTATAT
        +YI DYL+KKKLH TAK F TE+K+     +    +  G+LS  WS FWDVY +       +S    Q+G   E      P  T T
Subjt:  MYIHDYLIKKKLHSTAKSFRTELKMDSILQHGINSEANGYLSTCWSAFWDVYFST------KSPLLFQEGPAVEDFGAKPPTATAT
XP_033142157.1 transcriptional corepressor LEUNIG_HOMOLOG-like isoform X1 [Brassica rapa]3.4e-0439.53Show/hide
Query:  MYIHDYLIKKKLHSTAKSFRTELKMDSILQHGINSEANGYLSTCWSAFWDVYFST------KSPLLFQEGPAVEDFGAKPPTATAT
        +YI DYL+KKKLH TAK F TE+K+     +    +  G+LS  WS FWDVY +       +S    Q+G   E      P  T T
Subjt:  MYIHDYLIKKKLHSTAKSFRTELKMDSILQHGINSEANGYLSTCWSAFWDVYFST------KSPLLFQEGPAVEDFGAKPPTATAT
XP_033142159.1 transcriptional corepressor LEUNIG_HOMOLOG-like isoform X3 [Brassica rapa]3.4e-0439.53Show/hide
Query:  MYIHDYLIKKKLHSTAKSFRTELKMDSILQHGINSEANGYLSTCWSAFWDVYFST------KSPLLFQEGPAVEDFGAKPPTATAT
        +YI DYL+KKKLH TAK F TE+K+     +    +  G+LS  WS FWDVY +       +S    Q+G   E      P  T T
Subjt:  MYIHDYLIKKKLHSTAKSFRTELKMDSILQHGINSEANGYLSTCWSAFWDVYFST------KSPLLFQEGPAVEDFGAKPPTATAT
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
O48847 Transcriptional corepressor LEUNIG_HOMOLOG8.4e-0646.3Show/hide
Query:  MYIHDYLIKKKLHSTAKSFRTELKMDSILQHGINSEANGYLSTCWSAFWDVYFS
        +YI+DYL+KKKLH+TAKSF TE K+             G+L   WS FWD++ +
Subjt:  MYIHDYLIKKKLHSTAKSFRTELKMDSILQHGINSEANGYLSTCWSAFWDVYFS
Q9FUY2 Transcriptional corepressor LEUNIG7.8e-0438.89Show/hide
Query:  MYIHDYLIKKKLHSTAKSFRTELKMDSILQHGINSEANGYLSTCWSAFWDVYFS
        +YIHDYL+K+ L +TA++F+ E K+ S           G+L   WS FWD++ +
Subjt:  MYIHDYLIKKKLHSTAKSFRTELKMDSILQHGINSEANGYLSTCWSAFWDVYFS
Arabidopsis top hitse value%identityAlignment
AT2G32700.1 LEUNIG_homolog5.9e-0746.3Show/hide
Query:  MYIHDYLIKKKLHSTAKSFRTELKMDSILQHGINSEANGYLSTCWSAFWDVYFS
        +YI+DYL+KKKLH+TAKSF TE K+             G+L   WS FWD++ +
Subjt:  MYIHDYLIKKKLHSTAKSFRTELKMDSILQHGINSEANGYLSTCWSAFWDVYFS
AT2G32700.2 LEUNIG_homolog5.9e-0746.3Show/hide
Query:  MYIHDYLIKKKLHSTAKSFRTELKMDSILQHGINSEANGYLSTCWSAFWDVYFS
        +YI+DYL+KKKLH+TAKSF TE K+             G+L   WS FWD++ +
Subjt:  MYIHDYLIKKKLHSTAKSFRTELKMDSILQHGINSEANGYLSTCWSAFWDVYFS
AT2G32700.3 LEUNIG_homolog5.9e-0746.3Show/hide
Query:  MYIHDYLIKKKLHSTAKSFRTELKMDSILQHGINSEANGYLSTCWSAFWDVYFS
        +YI+DYL+KKKLH+TAKSF TE K+             G+L   WS FWD++ +
Subjt:  MYIHDYLIKKKLHSTAKSFRTELKMDSILQHGINSEANGYLSTCWSAFWDVYFS
AT2G32700.4 LEUNIG_homolog5.9e-0746.3Show/hide
Query:  MYIHDYLIKKKLHSTAKSFRTELKMDSILQHGINSEANGYLSTCWSAFWDVYFS
        +YI+DYL+KKKLH+TAKSF TE K+             G+L   WS FWD++ +
Subjt:  MYIHDYLIKKKLHSTAKSFRTELKMDSILQHGINSEANGYLSTCWSAFWDVYFS
AT2G32700.5 LEUNIG_homolog5.9e-0746.3Show/hide
Query:  MYIHDYLIKKKLHSTAKSFRTELKMDSILQHGINSEANGYLSTCWSAFWDVYFS
        +YI+DYL+KKKLH+TAKSF TE K+             G+L   WS FWD++ +
Subjt:  MYIHDYLIKKKLHSTAKSFRTELKMDSILQHGINSEANGYLSTCWSAFWDVYFS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACATACACGATTATCTCATCAAGAAGAAGCTTCATTCAACGGCAAAGTCCTTTCGAACCGAGCTGAAAATGGATTCCATTCTTCAACATGGCATTAATAGTGAGGC
TAATGGTTATCTTTCGACGTGCTGGTCTGCCTTCTGGGATGTCTATTTTTCAACCAAATCTCCACTACTCTTTCAGGAGGGTCCAGCAGTAGAAGATTTTGGTGCTAAGC
CCCCCACGGCCACCGCTACTGATCCACTAAAAGAATTAAAAGCGAAAATAAGGAAGTATCTTGATGATGAGCGTAGTTTAATCCCACAGAATTTCCAAAAACTACTGGAT
GATGAGGTATTGAAGACGCCATTAAAGCAGCCAACTCCAAGCTTACAAAAGTTTCAGAGCTCCAAAGTTCCAATCATTGTGATTGATGACGACAAAGAACAGGAAGATCA
GCTGCCTCATGATGGAGATCACAGTTTCGACCCAGAGGAACTCCTAGTACGTAAATCCCAATTCTGTTCTAAATTTCTAATCCGAATTAGTTTAGTTTATGCAAAATCCA
ACCTCTCATCTCCTTTGGAAGTTGAAGGATTTTATTGCGAAAGCAAAGATCGTGGCAAAAAACAAGCAGAAACCGAATACCATAACGGCAGCTACACCCAGAAAATCGTG
TCTGAAACCGAAAACATGCTTGAGAACGTCGTGTATCGCTATCGACTTGATTCCATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTACATACACGATTATCTCATCAAGAAGAAGCTTCATTCAACGGCAAAGTCCTTTCGAACCGAGCTGAAAATGGATTCCATTCTTCAACATGGCATTAATAGTGAGGC
TAATGGTTATCTTTCGACGTGCTGGTCTGCCTTCTGGGATGTCTATTTTTCAACCAAATCTCCACTACTCTTTCAGGAGGGTCCAGCAGTAGAAGATTTTGGTGCTAAGC
CCCCCACGGCCACCGCTACTGATCCACTAAAAGAATTAAAAGCGAAAATAAGGAAGTATCTTGATGATGAGCGTAGTTTAATCCCACAGAATTTCCAAAAACTACTGGAT
GATGAGGTATTGAAGACGCCATTAAAGCAGCCAACTCCAAGCTTACAAAAGTTTCAGAGCTCCAAAGTTCCAATCATTGTGATTGATGACGACAAAGAACAGGAAGATCA
GCTGCCTCATGATGGAGATCACAGTTTCGACCCAGAGGAACTCCTAGTACGTAAATCCCAATTCTGTTCTAAATTTCTAATCCGAATTAGTTTAGTTTATGCAAAATCCA
ACCTCTCATCTCCTTTGGAAGTTGAAGGATTTTATTGCGAAAGCAAAGATCGTGGCAAAAAACAAGCAGAAACCGAATACCATAACGGCAGCTACACCCAGAAAATCGTG
TCTGAAACCGAAAACATGCTTGAGAACGTCGTGTATCGCTATCGACTTGATTCCATCTGA
Protein sequenceShow/hide protein sequence
MYIHDYLIKKKLHSTAKSFRTELKMDSILQHGINSEANGYLSTCWSAFWDVYFSTKSPLLFQEGPAVEDFGAKPPTATATDPLKELKAKIRKYLDDERSLIPQNFQKLLD
DEVLKTPLKQPTPSLQKFQSSKVPIIVIDDDKEQEDQLPHDGDHSFDPEELLVRKSQFCSKFLIRISLVYAKSNLSSPLEVEGFYCESKDRGKKQAETEYHNGSYTQKIV
SETENMLENVVYRYRLDSI