; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS026157 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026157
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPlant protein of unknown function (DUF247)
Genome locationscaffold123_2:247791..248321
RNA-Seq ExpressionMS026157
SyntenyMS026157
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004158 - Protein of unknown function DUF247, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156841.1 putative UPF0481 protein At3g02645 [Momordica charantia]2.0e-7080.84Show/hide
Query:  SILSTNLEETEWVVQIKELLQRDDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSDKLKP
        SIL TNLEET+W+VQI EL QR+DFHT FE PTSIFQVPD I+N+ PEAFTPRR+ALGPYHHF+ ELLKLE YKLD A KVKDQIQL EFHQLVSDK+KP
Subjt:  SILSTNLEETEWVVQIKELLQRDDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSDKLKP

Query:  LELKIRACFDKYLEVECETLSWIMLIDGLFLIRLLHIFAEVEVKFYLKRHDLPLPELDAEHQKLYLS
        LELKIRACFDKYLEV CE L+WIMLIDGLFLI LLHIFAEV+V    KRH+LPLPELDAEHQK+YL+
Subjt:  LELKIRACFDKYLEVECETLSWIMLIDGLFLIRLLHIFAEVEVKFYLKRHDLPLPELDAEHQKLYLS

XP_022156845.1 putative UPF0481 protein At3g02645 [Momordica charantia]1.4e-6079.62Show/hide
Query:  EWVVQIKELLQRDDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSDKLKPLELKIRACFD
        +WVVQI ELLQR+DFHT FE PTSIFQVPD IRN++PEAFTPRRI+LGPYHHFR ELLKLE YKL  AKKVK QIQL EFHQLVSD LKPLEL+IRACFD
Subjt:  EWVVQIKELLQRDDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSDKLKPLELKIRACFD

Query:  KYLEVECETLSWIMLIDGLFLIRLLHIFAEVEVKFYLKRHDLPLPELDAEHQKLYLS
        KYLEV CE+LSW+MLID LFLIRLLHIFAEVEVK  L    L  PELD EHQ+LYL+
Subjt:  KYLEVECETLSWIMLIDGLFLIRLLHIFAEVEVKFYLKRHDLPLPELDAEHQKLYLS

XP_022156848.1 putative UPF0481 protein At3g02645 [Momordica charantia]1.3e-6677.78Show/hide
Query:  MASDSILSTNLEETEWVVQIKELLQRDDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSD
        + SDSILSTNL   EWVV+I ELLQR+DFHT FE P SIFQVPD IRN++PEAFTPRRI+LGPYHH + +LLKLE  KLD AKKVKD I L EFHQLVSD
Subjt:  MASDSILSTNLEETEWVVQIKELLQRDDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSD

Query:  KLKPLELKIRACFDKYLEVECETLSWIMLIDGLFLIRLLHIFAEVEVKFYLKRHDLPLPELDAEHQKLYLS
        KL PLELKIRACF KY E+ CE+LSWIMLID LFLIRLLHIFAEVEVK Y KRH+LPLPELDAEHQ++YL+
Subjt:  KLKPLELKIRACFDKYLEVECETLSWIMLIDGLFLIRLLHIFAEVEVKFYLKRHDLPLPELDAEHQKLYLS

XP_022156849.1 putative UPF0481 protein At3g02645 [Momordica charantia]6.4e-6978.24Show/hide
Query:  ASDSILSTNLEETEWVVQIKELLQRDDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSDK
        +S SILSTNLEET+WV+QI ELLQR++FHT FE P SIFQVPDSIRN++PEAFTPR +ALGP+HHF  +LL LE YKL  AKKVKDQIQL+EFHQL+SDK
Subjt:  ASDSILSTNLEETEWVVQIKELLQRDDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSDK

Query:  LKPLELKIRACFDKYLEVECETLSWIMLIDGLFLIRLLHIFAEVEVKFYLKRHDLPLPELDAEHQKLYLS
        LKPLELKIRACF KYLEV CE L+WIMLIDGLFLI LL IFAEVEVK  L+RH+LPLPELDAEHQ++YL+
Subjt:  LKPLELKIRACFDKYLEVECETLSWIMLIDGLFLIRLLHIFAEVEVKFYLKRHDLPLPELDAEHQKLYLS

XP_022156851.1 putative UPF0481 protein At3g02645 [Momordica charantia]5.8e-7079.88Show/hide
Query:  SDSILSTNLEETEWVVQIKELLQRDDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSDKL
        S SIL TNLEET+WV+QI ELLQR+DFHT FE P SIFQVPDSIRN++PEAFTPRR+ALGPYHHFRSELL LE YKL  AKKVKDQI+L+EFH+LVSDKL
Subjt:  SDSILSTNLEETEWVVQIKELLQRDDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSDKL

Query:  KPLELKIRACFDKYLEVECETLSWIMLIDGLFLIRLLHIFAEVEVKFYLKRHDLPLPELDAEHQKLYLS
        KPLELKIRACFDKYLEV CE L+WIMLIDGLFLI  L IFAEVEV+  L+RH+LPLPELD+EHQ++YL+
Subjt:  KPLELKIRACFDKYLEVECETLSWIMLIDGLFLIRLLHIFAEVEVKFYLKRHDLPLPELDAEHQKLYLS

TrEMBL top hitse value%identityAlignment
A0A6J1DRH1 putative UPF0481 protein At3g026456.9e-6179.62Show/hide
Query:  EWVVQIKELLQRDDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSDKLKPLELKIRACFD
        +WVVQI ELLQR+DFHT FE PTSIFQVPD IRN++PEAFTPRRI+LGPYHHFR ELLKLE YKL  AKKVK QIQL EFHQLVSD LKPLEL+IRACFD
Subjt:  EWVVQIKELLQRDDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSDKLKPLELKIRACFD

Query:  KYLEVECETLSWIMLIDGLFLIRLLHIFAEVEVKFYLKRHDLPLPELDAEHQKLYLS
        KYLEV CE+LSW+MLID LFLIRLLHIFAEVEVK  L    L  PELD EHQ+LYL+
Subjt:  KYLEVECETLSWIMLIDGLFLIRLLHIFAEVEVKFYLKRHDLPLPELDAEHQKLYLS

A0A6J1DRQ6 putative UPF0481 protein At3g026456.5e-6777.78Show/hide
Query:  MASDSILSTNLEETEWVVQIKELLQRDDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSD
        + SDSILSTNL   EWVV+I ELLQR+DFHT FE P SIFQVPD IRN++PEAFTPRRI+LGPYHH + +LLKLE  KLD AKKVKD I L EFHQLVSD
Subjt:  MASDSILSTNLEETEWVVQIKELLQRDDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSD

Query:  KLKPLELKIRACFDKYLEVECETLSWIMLIDGLFLIRLLHIFAEVEVKFYLKRHDLPLPELDAEHQKLYLS
        KL PLELKIRACF KY E+ CE+LSWIMLID LFLIRLLHIFAEVEVK Y KRH+LPLPELDAEHQ++YL+
Subjt:  KLKPLELKIRACFDKYLEVECETLSWIMLIDGLFLIRLLHIFAEVEVKFYLKRHDLPLPELDAEHQKLYLS

A0A6J1DUT7 putative UPF0481 protein At3g026453.1e-6978.24Show/hide
Query:  ASDSILSTNLEETEWVVQIKELLQRDDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSDK
        +S SILSTNLEET+WV+QI ELLQR++FHT FE P SIFQVPDSIRN++PEAFTPR +ALGP+HHF  +LL LE YKL  AKKVKDQIQL+EFHQL+SDK
Subjt:  ASDSILSTNLEETEWVVQIKELLQRDDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSDK

Query:  LKPLELKIRACFDKYLEVECETLSWIMLIDGLFLIRLLHIFAEVEVKFYLKRHDLPLPELDAEHQKLYLS
        LKPLELKIRACF KYLEV CE L+WIMLIDGLFLI LL IFAEVEVK  L+RH+LPLPELDAEHQ++YL+
Subjt:  LKPLELKIRACFDKYLEVECETLSWIMLIDGLFLIRLLHIFAEVEVKFYLKRHDLPLPELDAEHQKLYLS

A0A6J1DW70 putative UPF0481 protein At3g026459.7e-7180.84Show/hide
Query:  SILSTNLEETEWVVQIKELLQRDDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSDKLKP
        SIL TNLEET+W+VQI EL QR+DFHT FE PTSIFQVPD I+N+ PEAFTPRR+ALGPYHHF+ ELLKLE YKLD A KVKDQIQL EFHQLVSDK+KP
Subjt:  SILSTNLEETEWVVQIKELLQRDDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSDKLKP

Query:  LELKIRACFDKYLEVECETLSWIMLIDGLFLIRLLHIFAEVEVKFYLKRHDLPLPELDAEHQKLYLS
        LELKIRACFDKYLEV CE L+WIMLIDGLFLI LLHIFAEV+V    KRH+LPLPELDAEHQK+YL+
Subjt:  LELKIRACFDKYLEVECETLSWIMLIDGLFLIRLLHIFAEVEVKFYLKRHDLPLPELDAEHQKLYLS

A0A6J1DW80 putative UPF0481 protein At3g026452.8e-7079.88Show/hide
Query:  SDSILSTNLEETEWVVQIKELLQRDDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSDKL
        S SIL TNLEET+WV+QI ELLQR+DFHT FE P SIFQVPDSIRN++PEAFTPRR+ALGPYHHFRSELL LE YKL  AKKVKDQI+L+EFH+LVSDKL
Subjt:  SDSILSTNLEETEWVVQIKELLQRDDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSDKL

Query:  KPLELKIRACFDKYLEVECETLSWIMLIDGLFLIRLLHIFAEVEVKFYLKRHDLPLPELDAEHQKLYLS
        KPLELKIRACFDKYLEV CE L+WIMLIDGLFLI  L IFAEVEV+  L+RH+LPLPELD+EHQ++YL+
Subjt:  KPLELKIRACFDKYLEVECETLSWIMLIDGLFLIRLLHIFAEVEVKFYLKRHDLPLPELDAEHQKLYLS

SwissProt top hitse value%identityAlignment
P0C897 Putative UPF0481 protein At3g026453.8e-2439.86Show/hide
Query:  EETEWVVQIKELLQRD-DFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSDKLKPLELKIR
        +ET WV+ +++ L  + + H   E   SIF VP ++    P+++TP R+++GPYH  + EL ++E YKL  A+K+++Q     FH LV +KL+ +E+KIR
Subjt:  EETEWVVQIKELLQRD-DFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSDKLKPLELKIR

Query:  ACFDKYLEVECETLSWIMLIDGLFLIRLLHIFAEVEVKFYLKR
        AC+ KY+    ETL WIM +D  FLI  L I++  +V+  + R
Subjt:  ACFDKYLEVECETLSWIMLIDGLFLIRLLHIFAEVEVKFYLKR

Arabidopsis top hitse value%identityAlignment
AT3G02645.1 Plant protein of unknown function (DUF247)2.7e-2539.86Show/hide
Query:  EETEWVVQIKELLQRD-DFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSDKLKPLELKIR
        +ET WV+ +++ L  + + H   E   SIF VP ++    P+++TP R+++GPYH  + EL ++E YKL  A+K+++Q     FH LV +KL+ +E+KIR
Subjt:  EETEWVVQIKELLQRD-DFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSDKLKPLELKIR

Query:  ACFDKYLEVECETLSWIMLIDGLFLIRLLHIFAEVEVKFYLKR
        AC+ KY+    ETL WIM +D  FLI  L I++  +V+  + R
Subjt:  ACFDKYLEVECETLSWIMLIDGLFLIRLLHIFAEVEVKFYLKR

AT3G47250.1 Plant protein of unknown function (DUF247)4.0e-0828.85Show/hide
Query:  IFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQ-LVSDKLKPLELKIRACFDKYLEVECETLSWIMLIDGLFLIR
        IF++PDS+    P+A+ P+ +++GPYH+  + L  ++ +K    +   D+       + ++   +  L+ KIRA + + L +E   L  +M++DG F++ 
Subjt:  IFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQ-LVSDKLKPLELKIRACFDKYLEVECETLSWIMLIDGLFLIR

Query:  LLHI
        LL I
Subjt:  LLHI

AT3G50130.1 Plant protein of unknown function (DUF247)1.5e-1027.27Show/hide
Query:  EET--EWVVQIKELLQ---RDDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSDKLKPLE
        EET  EWV+ I++ ++   R+D  T+++    I++VP  ++    +++ P+ ++LGP+HH    LL ++ +K  A   V    +     ++  D +K LE
Subjt:  EET--EWVVQIKELLQ---RDDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSDKLKPLE

Query:  LKIRACFDKYLEVECETLSWIMLIDGLFLIRL
         + RAC++  +++     S ++++DG F++ L
Subjt:  LKIRACFDKYLEVECETLSWIMLIDGLFLIRL

AT3G50160.1 Plant protein of unknown function (DUF247)3.0e-0825Show/hide
Query:  WVVQIKELLQR-DDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSDKLKPLELKIRACFD
        WV+ + + ++   D  TT      I++VP  ++    +++ P+ +++GPYHH    L+ +E +K  A   V    +     ++  D +K LE K RAC+ 
Subjt:  WVVQIKELLQR-DDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSDKLKPLELKIRACFD

Query:  KYLEVECETLSWIMLIDGLFLIRL
          + +       ++++DG+F+I +
Subjt:  KYLEVECETLSWIMLIDGLFLIRL

AT3G50180.1 Plant protein of unknown function (DUF247)4.2e-1026.43Show/hide
Query:  SDSILSTNLEETEWVVQIKELLQ---RDDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVS
        ++ +  +  +  EWV+ IK+ L+   R+D  T++     I++VP  +     +++ P+ ++LGPYHH R +   +E +K  A   V    + ++  ++  
Subjt:  SDSILSTNLEETEWVVQIKELLQ---RDDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVS

Query:  DKLKPLELKIRACFDKYLEVECETLSWIMLIDGLFLIRLL
        D +  LE K RAC++  + +     + ++L+DG F++ LL
Subjt:  DKLKPLELKIRACFDKYLEVECETLSWIMLIDGLFLIRLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCAGATTCAATTCTAAGCACAAATCTCGAAGAAACAGAGTGGGTTGTGCAAATCAAAGAGCTTCTCCAACGAGATGACTTTCATACAACTTTTGAATGTCCAAC
TTCCATCTTTCAGGTGCCGGATTCTATCCGAAACGAAACTCCAGAAGCTTTCACTCCTCGTCGTATTGCTTTGGGACCATATCACCATTTTCGTTCGGAGCTGCTCAAGT
TGGAGCCCTACAAGCTCGATGCAGCAAAGAAGGTGAAAGACCAGATCCAACTTTCTGAATTTCACCAACTTGTCAGTGATAAACTGAAGCCATTGGAGCTCAAAATAAGA
GCATGTTTCGACAAATATTTGGAAGTGGAATGCGAGACGTTGAGCTGGATAATGCTCATCGATGGCTTGTTCTTGATTCGCTTGCTTCATATCTTTGCTGAAGTGGAAGT
AAAGTTTTATCTTAAACGCCACGACCTTCCATTGCCTGAGCTTGATGCTGAGCACCAAAAGTTGTACCTCTCAATCACGAAGCAAGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATCAGATTCAATTCTAAGCACAAATCTCGAAGAAACAGAGTGGGTTGTGCAAATCAAAGAGCTTCTCCAACGAGATGACTTTCATACAACTTTTGAATGTCCAAC
TTCCATCTTTCAGGTGCCGGATTCTATCCGAAACGAAACTCCAGAAGCTTTCACTCCTCGTCGTATTGCTTTGGGACCATATCACCATTTTCGTTCGGAGCTGCTCAAGT
TGGAGCCCTACAAGCTCGATGCAGCAAAGAAGGTGAAAGACCAGATCCAACTTTCTGAATTTCACCAACTTGTCAGTGATAAACTGAAGCCATTGGAGCTCAAAATAAGA
GCATGTTTCGACAAATATTTGGAAGTGGAATGCGAGACGTTGAGCTGGATAATGCTCATCGATGGCTTGTTCTTGATTCGCTTGCTTCATATCTTTGCTGAAGTGGAAGT
AAAGTTTTATCTTAAACGCCACGACCTTCCATTGCCTGAGCTTGATGCTGAGCACCAAAAGTTGTACCTCTCAATCACGAAGCAAGTCTAG
Protein sequenceShow/hide protein sequence
MASDSILSTNLEETEWVVQIKELLQRDDFHTTFECPTSIFQVPDSIRNETPEAFTPRRIALGPYHHFRSELLKLEPYKLDAAKKVKDQIQLSEFHQLVSDKLKPLELKIR
ACFDKYLEVECETLSWIMLIDGLFLIRLLHIFAEVEVKFYLKRHDLPLPELDAEHQKLYLSITKQV