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MS026222 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026222
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionpumilio homolog 12-like
Genome locationscaffold797:334553..334807
RNA-Seq ExpressionMS026222
SyntenyMS026222
Gene Ontology termsGO:0006417 - regulation of translation (biological process)
GO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148742.1 pumilio homolog 12-like [Momordica charantia]2.5e-3495Show/hide
Query:  MENQTPFQLPNYLTNGNRIFTNLNPSSSTSSIQALEAQLGRLQLSSPVAAVDVPDHSWPPYFMSNHVDSPNFFQPPMDNG
        MENQTPFQLPNYLTNGNRIFTNLNPSSSTSSIQALEAQLGRLQL S VAAVDV DHSWPPYFMSNHVDSPNFFQPPM NG
Subjt:  MENQTPFQLPNYLTNGNRIFTNLNPSSSTSSIQALEAQLGRLQLSSPVAAVDVPDHSWPPYFMSNHVDSPNFFQPPMDNG
TrEMBL top hitse value%identityAlignment
A0A6J1D5W5 pumilio homolog 12-like1.2e-3495Show/hide
Query:  MENQTPFQLPNYLTNGNRIFTNLNPSSSTSSIQALEAQLGRLQLSSPVAAVDVPDHSWPPYFMSNHVDSPNFFQPPMDNG
        MENQTPFQLPNYLTNGNRIFTNLNPSSSTSSIQALEAQLGRLQL S VAAVDV DHSWPPYFMSNHVDSPNFFQPPM NG
Subjt:  MENQTPFQLPNYLTNGNRIFTNLNPSSSTSSIQALEAQLGRLQLSSPVAAVDVPDHSWPPYFMSNHVDSPNFFQPPMDNG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAATCAAACACCATTCCAGCTTCCAAACTACCTTACAAATGGCAATCGAATATTTACCAATCTTAACCCTTCTTCTTCAACCTCTTCCATCCAAGCTTTGGAAGC
TCAACTCGGCCGCTTACAGCTGTCGTCGCCGGTGGCAGCGGTCGACGTTCCCGATCACTCATGGCCGCCGTATTTCATGAGCAATCACGTGGATAGCCCCAACTTCTTTC
AACCTCCCATGGACAATGGTTTTCTCTCGCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAATCAAACACCATTCCAGCTTCCAAACTACCTTACAAATGGCAATCGAATATTTACCAATCTTAACCCTTCTTCTTCAACCTCTTCCATCCAAGCTTTGGAAGC
TCAACTCGGCCGCTTACAGCTGTCGTCGCCGGTGGCAGCGGTCGACGTTCCCGATCACTCATGGCCGCCGTATTTCATGAGCAATCACGTGGATAGCCCCAACTTCTTTC
AACCTCCCATGGACAATGGTTTTCTCTCGCTCTAG
Protein sequenceShow/hide protein sequence
MENQTPFQLPNYLTNGNRIFTNLNPSSSTSSIQALEAQLGRLQLSSPVAAVDVPDHSWPPYFMSNHVDSPNFFQPPMDNGFLSL