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MS026235 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS026235
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionB3 domain-containing protein At3g19184-like
Genome locationscaffold797:987146..989222
RNA-Seq ExpressionMS026235
SyntenyMS026235
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588654.1 B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]4.9e-1386.96Show/hide
Query:  TKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRRY
        TKQLKRPR+P D+SS SVRRSSRFADKPPPNYKEVPIEPLPG R Y
Subjt:  TKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRRY

XP_022135699.1 B3 domain-containing protein At3g19184-like isoform X1 [Momordica charantia]1.4e-15100Show/hide
Query:  TKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRR
        TKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRR
Subjt:  TKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRR

XP_022135700.1 B3 domain-containing protein At3g19184-like isoform X2 [Momordica charantia]1.4e-15100Show/hide
Query:  TKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRR
        TKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRR
Subjt:  TKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRR

XP_022988869.1 B3 domain-containing protein At3g19184-like isoform X1 [Cucurbita maxima]4.9e-1386.96Show/hide
Query:  TKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRRY
        TKQLKRPR+P D+SS SVRRSSRFADKPPPNYKEVPIEPLPG R Y
Subjt:  TKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRRY

XP_023530120.1 B3 domain-containing protein At3g19184 [Cucurbita pepo subsp. pepo]4.9e-1386.96Show/hide
Query:  TKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRRY
        TKQLKRPR+P D+SS SVRRSSRFADKPPPNYKEVPIEPLPG R Y
Subjt:  TKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRRY

TrEMBL top hitse value%identityAlignment
A0A5D3C624 B3 domain-containing protein3.1e-1388.89Show/hide
Query:  TKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRR
        TKQLKRPR+P DVSS SVRRSSRFADKPP NYKEVPIEPLPG+RR
Subjt:  TKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRR

A0A6J1C1S1 B3 domain-containing protein At3g19184-like isoform X26.7e-16100Show/hide
Query:  TKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRR
        TKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRR
Subjt:  TKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRR

A0A6J1C272 B3 domain-containing protein At3g19184-like isoform X16.7e-16100Show/hide
Query:  TKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRR
        TKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRR
Subjt:  TKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRR

A0A6J1EIB3 B3 domain-containing protein At3g19184-like2.4e-1386.96Show/hide
Query:  TKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRRY
        TKQLKRPR+P D+SS SVRRSSRFADKPPPNYKEVPIEPLPG R Y
Subjt:  TKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRRY

A0A6J1JMT2 B3 domain-containing protein At3g19184-like isoform X12.4e-1386.96Show/hide
Query:  TKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRRY
        TKQLKRPR+P D+SS SVRRSSRFADKPPPNYKEVPIEPLPG R Y
Subjt:  TKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRRY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAATGGATTTAGAGTTTTATTTCTCTATTTGGTTATGGAAGACGAAGCAGCTGAAGCGTCCTCGCCGCCCGCTCGATGTCTCGTCCGTCAGTGTGAGAAGATCCAG
CCGTTTTGCGGATAAGCCCCCTCCGAACTATAAGGAGGTGCCCATTGAACCACTTCCAGGTGTCAGAAGGTATACATCATCAGGGCATATAATTCCGAAGACAAAAAAGC
AGACACCAAAGAGGATTCCGATGTCTCTCAGGTGGAAAGAAGCGGCAAAAGAACTACTAGATCAGCAAGTAAAGGGAGAAAATAGCTCAAAGCGTTGCCTTTGCCACGTG
GCTTGTGACAAGGAGAAGTATCCAAGACTTTTTGGGAAAAAGAGAGTTTTCAGGATATTTTGTCAGTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATAATGGATTTAGAGTTTTATTTCTCTATTTGGTTATGGAAGACGAAGCAGCTGAAGCGTCCTCGCCGCCCGCTCGATGTCTCGTCCGTCAGTGTGAGAAGATCCAG
CCGTTTTGCGGATAAGCCCCCTCCGAACTATAAGGAGGTGCCCATTGAACCACTTCCAGGTGTCAGAAGGTATACATCATCAGGGCATATAATTCCGAAGACAAAAAAGC
AGACACCAAAGAGGATTCCGATGTCTCTCAGGTGGAAAGAAGCGGCAAAAGAACTACTAGATCAGCAAGTAAAGGGAGAAAATAGCTCAAAGCGTTGCCTTTGCCACGTG
GCTTGTGACAAGGAGAAGTATCCAAGACTTTTTGGGAAAAAGAGAGTTTTCAGGATATTTTGTCAGTCTTAG
Protein sequenceShow/hide protein sequence
MIMDLEFYFSIWLWKTKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRRYTSSGHIIPKTKKQTPKRIPMSLRWKEAAKELLDQQVKGENSSKRCLCHV
ACDKEKYPRLFGKKRVFRIFCQS