CuGenDBv2

Gene ID	MS026237
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	zinc finger protein ZOP1
Genome location	scaffold797:1041455..1043698
RNA-Seq Expression	MS026237
Synteny	MS026237
Gene Ontology terms	GO:0000398 - mRNA splicing, via spliceosome (biological process) GO:0005681 - spliceosomal complex (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022135853.1 zinc finger protein ZOP1 [Momordica charantia]

9.3e-68

82.07

Show/hide

Query:  KAKRSYQKDIANFRDARDSHALPVDVQENGEE--------------------------------SKWVTQEEAHASPQFFSNFKHKKPILEKPSSASASA
        KAKRSYQKDIANFRDARDSHALPVDVQENGEE                                 KWVTQEEAHASPQFFSNFKHKKPILEKPSSASASA
Subjt:  KAKRSYQKDIANFRDARDSHALPVDVQENGEE--------------------------------SKWVTQEEAHASPQFFSNFKHKKPILEKPSSASASA

Query:  AMKDKNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVGKRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP
        AMKDKNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVGKRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP
Subjt:  AMKDKNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVGKRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP

XP_022953041.1 zinc finger protein ZOP1 [Cucurbita moschata]

2.1e-59

74.32

Show/hide

Query:  KAKRSYQKDIANFRDARDSHALPVDVQENGEE-------------------------------SKWVTQEEAHASPQFFSNFKHKKPILEKPSSASASAA
        KAKRSYQKDIANFR+ARDSHALPVDVQEN E+                                KWVTQEEAHASPQFF N KHKKP+LE PSSASASAA
Subjt:  KAKRSYQKDIANFRDARDSHALPVDVQENGEE-------------------------------SKWVTQEEAHASPQFFSNFKHKKPILEKPSSASASAA

Query:  MKDKNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVGKRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP
        +KDKNVDKGESGPPPGLVVSAS  P RSVKGAPSS+AVGKRKRP+ KQKVIS+EEKAALKAREAAKKRVEQREKPLLGLYKLP
Subjt:  MKDKNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVGKRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP

XP_022972471.1 zinc finger protein ZOP1 [Cucurbita maxima]

3.5e-59

74.32

Show/hide

Query:  KAKRSYQKDIANFRDARDSHALPVDVQENGEE-------------------------------SKWVTQEEAHASPQFFSNFKHKKPILEKPSSASASAA
        KAKRSYQKDIANFR+ARDSHALPVDVQEN E+                                KWVTQEEAHASPQFF N KHKKP+LE PSSASASAA
Subjt:  KAKRSYQKDIANFRDARDSHALPVDVQENGEE-------------------------------SKWVTQEEAHASPQFFSNFKHKKPILEKPSSASASAA

Query:  MKDKNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVGKRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP
         KDKNVDKGESGPPPGLVVSAS  P RSVKGAPSS+AVGKRKRP+ KQKVIS+EEKAALKAREAAKKRVEQREKPLLGLYKLP
Subjt:  MKDKNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVGKRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP

XP_031744713.1 uncharacterized protein LOC101207712 isoform X3 [Cucumis sativus]

8.7e-58

71.2

Show/hide

Query:  KAKRSYQKDIANFRDARDSHALPVDVQENGEE--------------------------------SKWVTQEEAHASPQFFSNFKHKKPILEKPSSASASA
        KA RSYQKDIANFR+ARDSHALPVDVQE G+E                                 KWVTQEEAH+SPQFF + KHKKPIL KPSSASAS 
Subjt:  KAKRSYQKDIANFRDARDSHALPVDVQENGEE--------------------------------SKWVTQEEAHASPQFFSNFKHKKPILEKPSSASASA

Query:  AMKDKNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVGKRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP
        A+KDKNVDKGE GPPPGLVVSASLNP RS+KGAPSS+AVGKRKRPD KQK IS+EEKAALKAREAAKKRVE+REKPLLGLY+LP
Subjt:  AMKDKNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVGKRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP

XP_038888245.1 zinc finger protein ZOP1 [Benincasa hispida]

2.7e-59

73.37

Show/hide

Query:  KAKRSYQKDIANFRDARDSHALPVDVQENGEE--------------------------------SKWVTQEEAHASPQFFSNFKHKKPILEKPSSASASA
        KA RSYQKDIAN R+A+DSHALPV+VQENGEE                                 KWVTQEEAH+SPQ+F N KHKKP+L KPSSASASA
Subjt:  KAKRSYQKDIANFRDARDSHALPVDVQENGEE--------------------------------SKWVTQEEAHASPQFFSNFKHKKPILEKPSSASASA

Query:  AMKDKNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVGKRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP
        A+KDKNVDKGESGPPPGLVVSASLNP RSVKGAPSSVAVGKRKRPD KQK IS+EEKAALKAREAAKKRVEQREKPLLGLYKLP
Subjt:  AMKDKNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVGKRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K4T4 Matrin-type domain-containing protein

4.2e-58

71.2

Show/hide

Query:  KAKRSYQKDIANFRDARDSHALPVDVQENGEE--------------------------------SKWVTQEEAHASPQFFSNFKHKKPILEKPSSASASA
        KA RSYQKDIANFR+ARDSHALPVDVQE G+E                                 KWVTQEEAH+SPQFF + KHKKPIL KPSSASAS 
Subjt:  KAKRSYQKDIANFRDARDSHALPVDVQENGEE--------------------------------SKWVTQEEAHASPQFFSNFKHKKPILEKPSSASASA

Query:  AMKDKNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVGKRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP
        A+KDKNVDKGE GPPPGLVVSASLNP RS+KGAPSS+AVGKRKRPD KQK IS+EEKAALKAREAAKKRVE+REKPLLGLY+LP
Subjt:  AMKDKNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVGKRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP

A0A5D3C6F8 Zinc finger protein ZOP1 isoform X1

1.0e-56

70.65

Show/hide

Query:  KAKRSYQKDIANFRDARDSHALPVDVQENGEE--------------------------------SKWVTQEEAHASPQFFSNFKHKKPILEKPSSASASA
        KA RSYQKDIANFR+ARDSHALPVDVQE G+E                                 KWVTQEEAH+SPQFF + KHKKPIL  PSSASAS 
Subjt:  KAKRSYQKDIANFRDARDSHALPVDVQENGEE--------------------------------SKWVTQEEAHASPQFFSNFKHKKPILEKPSSASASA

Query:  AMKDKNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVGKRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP
        A+KDKNVDK E GPPPGLVVSASLNP RSVKGAPSS+AVGKRKRPD KQK IS+EEKAALKAREAAKKRVE+REKPLLGLY+LP
Subjt:  AMKDKNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVGKRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP

A0A6J1C616 zinc finger protein ZOP1

4.5e-68

82.07

Show/hide

Query:  KAKRSYQKDIANFRDARDSHALPVDVQENGEE--------------------------------SKWVTQEEAHASPQFFSNFKHKKPILEKPSSASASA
        KAKRSYQKDIANFRDARDSHALPVDVQENGEE                                 KWVTQEEAHASPQFFSNFKHKKPILEKPSSASASA
Subjt:  KAKRSYQKDIANFRDARDSHALPVDVQENGEE--------------------------------SKWVTQEEAHASPQFFSNFKHKKPILEKPSSASASA

Query:  AMKDKNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVGKRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP
        AMKDKNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVGKRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP
Subjt:  AMKDKNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVGKRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP

A0A6J1GM42 zinc finger protein ZOP1

1.0e-59

74.32

Show/hide

Query:  KAKRSYQKDIANFRDARDSHALPVDVQENGEE-------------------------------SKWVTQEEAHASPQFFSNFKHKKPILEKPSSASASAA
        KAKRSYQKDIANFR+ARDSHALPVDVQEN E+                                KWVTQEEAHASPQFF N KHKKP+LE PSSASASAA
Subjt:  KAKRSYQKDIANFRDARDSHALPVDVQENGEE-------------------------------SKWVTQEEAHASPQFFSNFKHKKPILEKPSSASASAA

Query:  MKDKNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVGKRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP
        +KDKNVDKGESGPPPGLVVSAS  P RSVKGAPSS+AVGKRKRP+ KQKVIS+EEKAALKAREAAKKRVEQREKPLLGLYKLP
Subjt:  MKDKNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVGKRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP

A0A6J1I626 zinc finger protein ZOP1

1.7e-59

74.32

Show/hide

Query:  KAKRSYQKDIANFRDARDSHALPVDVQENGEE-------------------------------SKWVTQEEAHASPQFFSNFKHKKPILEKPSSASASAA
        KAKRSYQKDIANFR+ARDSHALPVDVQEN E+                                KWVTQEEAHASPQFF N KHKKP+LE PSSASASAA
Subjt:  KAKRSYQKDIANFRDARDSHALPVDVQENGEE-------------------------------SKWVTQEEAHASPQFFSNFKHKKPILEKPSSASASAA

Query:  MKDKNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVGKRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP
         KDKNVDKGESGPPPGLVVSAS  P RSVKGAPSS+AVGKRKRP+ KQKVIS+EEKAALKAREAAKKRVEQREKPLLGLYKLP
Subjt:  MKDKNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVGKRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP

SwissProt top hits

e value

%identity

Alignment

Q7XA66 Zinc finger protein ZOP1

1.0e-21

45.05

Show/hide

Query:  KAKRSYQKDIANFRDARDSHALPVD---------------VQENG-------------EESKWVTQEEAHASPQFFSNFKHKKPILEKPSSASASAAMKD
        KA RSYQKDIA  +    ++  P D                Q NG                 WVTQ+EA+A+ +  S    K P+++KP S+S +     
Subjt:  KAKRSYQKDIANFRDARDSHALPVD---------------VQENG-------------EESKWVTQEEAHASPQFFSNFKHKKPILEKPSSASASAAMKD

Query:  KNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVG--KRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP
                G PPG +V+ASLNP R+VKGA SSV +G  KRKR D K K +S EEKAALKAREAA+KRVE REKPLLGLY  P
Subjt:  KNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVG--KRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP

Arabidopsis top hits

e value

%identity

Alignment

AT1G49590.1 C2H2 and C2HC zinc fingers superfamily protein

7.4e-23

45.05

Show/hide

Query:  KAKRSYQKDIANFRDARDSHALPVD---------------VQENG-------------EESKWVTQEEAHASPQFFSNFKHKKPILEKPSSASASAAMKD
        KA RSYQKDIA  +    ++  P D                Q NG                 WVTQ+EA+A+ +  S    K P+++KP S+S +     
Subjt:  KAKRSYQKDIANFRDARDSHALPVD---------------VQENG-------------EESKWVTQEEAHASPQFFSNFKHKKPILEKPSSASASAAMKD

Query:  KNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVG--KRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP
                G PPG +V+ASLNP R+VKGA SSV +G  KRKR D K K +S EEKAALKAREAA+KRVE REKPLLGLY  P
Subjt:  KNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVG--KRKRPDAKQKVISDEEKAALKAREAAKKRVEQREKPLLGLYKLP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCTGCCAAGGAAAAAGAACAAAAGGAAGCAGTACGGGCCATTGAACAAATTGAGGCAAAGTTCTAAAGTAAGCCTTGATGTAACTCTAAGCTATCTTATGAATGCTCA
TGTCAACCTTATTGTAGATAGGGATTGGGTTAAAGACTTAAAGTTAAACTATCTGCCTGCTTCGCATCAGTGCTGCAAAGGAATCAAGCTATTTGCATGCTTCCTTAATC
TTAGGTCAACGAAGAAAGCTAAGCGTAGTTACCAGAAGGACATAGCCAATTTCCGGGATGCTAGAGATTCTCATGCACTTCCAGTTGACGTTCAAGAAAATGGTGAAGAG
AGCAAGTGGGTAACACAGGAAGAGGCACATGCTTCGCCTCAGTTCTTTTCAAACTTCAAACATAAGAAACCAATTTTAGAGAAGCCATCATCGGCCTCTGCAAGTGCAGC
TATGAAAGACAAGAATGTCGATAAAGGGGAAAGTGGGCCTCCACCTGGGCTGGTTGTTTCAGCTTCTTTAAACCCCACGCGATCCGTTAAAGGTGCTCCTTCATCAGTTG
CTGTTGGTAAGAGGAAGAGGCCAGATGCGAAGCAAAAGGTTATCTCTGACGAAGAAAAAGCCGCCCTTAAAGCAAGGGAGGCTGCAAAGAAGAGGGTCGAACAGAGGGAG
AAGCCACTTCTTGGTCTTTATAAGTTGCCATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MLPRKKNKRKQYGPLNKLRQSSKVSLDVTLSYLMNAHVNLIVDRDWVKDLKLNYLPASHQCCKGIKLFACFLNLRSTKKAKRSYQKDIANFRDARDSHALPVDVQENGEE
SKWVTQEEAHASPQFFSNFKHKKPILEKPSSASASAAMKDKNVDKGESGPPPGLVVSASLNPTRSVKGAPSSVAVGKRKRPDAKQKVISDEEKAALKAREAAKKRVEQRE
KPLLGLYKLP

MS026237 (gene) of Bitter gourd (TR) v1 genome